Helicobacter Details: NCBI 209, gram-negative or unknown [genus]
| Gastrospirillum| Helicobacter| Helicobacter Goodwin et al. 1989 emend. Vandamme et al. 1991
Helicobacter pylori Infections:
- Transmission: H. pylori is primarily transmitted through oral-oral or fecal-oral routes. It is a common bacterial infection worldwide.
- Gastritis and Peptic Ulcers: H. pylori is a major cause of chronic gastritis and peptic ulcers. In some individuals, the infection can lead to the development of stomach ulcers or inflammation of the stomach lining (gastritis).
Gastric Cancer:
- Persistent infection with H. pylori is a significant risk factor for the development of gastric cancer. Chronic inflammation caused by the bacteria can contribute to the progression of precancerous lesions.
MALT Lymphoma:
- H. pylori infection has been linked to the development of mucosa-associated lymphoid tissue (MALT) lymphoma, a type of non-Hodgkin lymphoma that can affect the stomach.
Functional Dyspepsia:
- In some cases, H. pylori infection may be associated with functional dyspepsia, a condition characterized by persistent or recurrent pain or discomfort in the upper abdomen.
Extra-Gastric Manifestations:
- Some studies suggest potential associations between H. pylori infection and certain extra-gastric conditions, such as cardiovascular diseases, but the nature of these associations is still under investigation.
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Other Sources for more information:
- Immune Epitope Database
- The NCBI taxonomy database
- UniProt
- Immune Epitope Taxonomy Database (IEDB)
- AI Engines For more Details: Perplexity Kagi Labs You
 Statistics
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NCBI | Data Punk | End Products Produced |
Lab Reporting
Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.
Desired Levels Suggestions for Helicobacter
- Frequency - how often do samples show this bacteria
- UD - An alternative statistical algorithm (which factors in the frequency)
- Kaltoft-Moldrup Heuristic Using uploaded data
- Lab Low and High are calculated using the formula that most labs use: Mean - 2 Standard Deviation to Mean + 2 Standard Deviation
| Lab | Frequency | UD-Low | UD-High | KM Low | KM High | Lab Low | Lab High | Mean | Median | Standard Deviation | Box Plot Low | Box Plot High | KM Percentile Low | KM Percentile High |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Other Labs | 1.32 | 3 | 17780 | 0 | 14443 | 2470.8 | 70 | 6108.5 | 0 | 510 | 0 %ile | 100 %ile | ||
| biomesight | 27.79 | 0 | 10 | 10 | 40 | 0 | 481 | 39.8 | 20 | 225.1 | 20 | 40 | 0 %ile | 89.9 %ile |
| thorne | 96.55 | 3 | 43 | 0 | 35 | 14.4 | 11 | 10.8 | 3 | 27 | 0 %ile | 100 %ile | ||
| thryve | 3.88 | 1 | 34092 | 0 | 12715 | 1252.7 | 20 | 5848.2 | 6 | 52 | 0 %ile | 100 %ile | ||
| ubiome | 0.38 | 17 | 5595 | 0 | 8063 | 2117 | 739 | 3033.6 | 17 | 5595 | 20 %ile | 60 %ile |
External Reference Ranges for Helicobacter
| Source of Ranges | Low Boundary | High Boundary | Low Boundary %age | High Boundary %age |
|---|---|---|---|---|
| XenoGene | 0 | 100 | 0 | 0.01 |
| Lab Teletest | 0 | 500 | 0 | 0.05 |
| Thorne (20/80%ile) | 3.43 | 8.53 | 0.0003 | 0.0009 |
Statistic by Lab Source for Helicobacter
| Lab | Frequency Seen | Average | Standard Deviation | Sample Count | Lab Samples |
|---|---|---|---|---|---|
| BiomeSight | 31.375 % | 0.004 % | 0.03 % | 924.0 | 2945 |
| BiomeSightRdp | 12.5 % | 0.002 % | 0.002 % | 4.0 | 32 |
| bugspeak | 100 % | 0.005 % | % | 1.0 | 1 |
| CerbaLab | 66.667 % | 0.003 % | 0.002 % | 2.0 | 3 |
| custom | 39.344 % | 0.827 % | 0.894 % | 24.0 | 61 |
| es-xenogene | 93.103 % | 0.016 % | 0.013 % | 27.0 | 29 |
| Medivere | 14.286 % | 0.001 % | % | 1.0 | 7 |
| Thorne | 81.72 % | 0.001 % | 0.001 % | 76.0 | 93 |
| Thryve | 3.466 % | 0.112 % | 0.554 % | 48.0 | 1385 |
| uBiome | 0.379 % | 0.212 % | 0.303 % | 3.0 | 792 |
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