| Proteobacteria |
|
|
|
phylum |
Fibrobacteres |
| Bacteroidetes |
|
|
Bacteroides MIC4612 |
genus |
Actinomadura |
| Bacteroidetes |
|
Bacteroides |
|
genus |
Actinomadura |
| Bacteroidetes |
|
Bacteroides_A |
|
genus |
Actinomadura |
| Bacteroidetes |
|
Bacteroides_B |
|
genus |
Actinomadura |
| Bacteroidetes |
|
|
Bacteroides ovatus |
species |
Bacteroides ovatus |
| Bacteroidetes |
|
|
Bacteroides salyersiae |
species |
Bacteroides sp. WAL 10018 |
| Bacteroidetes |
|
|
Bacteroides stercoris |
species |
Bacteroides stercoris |
| Bacteroidetes |
|
|
Bacteroides thetaiotaomicron |
species |
[Clostridium] aldenense |
| Bacteroidetes |
|
|
Bacteroides uniformis |
species |
Eubacterium ruminantium |
| Bacteroidetes |
|
|
Bacteroides_A coprocola |
species |
Bacteroides coprocola |
| Bacteroidetes |
|
|
Bacteroides_A plebeius |
species |
Bacteroides plebeius |
| Bacteroidetes |
|
|
Bacteroides_B vulgatus |
species |
[Bacteroides] coagulans |
| Bacteroidetes |
|
|
Bacteroides caccae |
species |
Bacteroides caccae |
| Bacteroidetes |
|
|
Bacteroides cellulosilyticus |
species |
Bacteroides cellulosilyticus |
| Firmicutes_A |
|
|
Agathobacter faecis |
species |
DSM 16840 |
| Proteobacteria |
|
|
51-20 MIC6194 |
no rank |
unclassified Proteobacteria |
| Proteobacteria |
|
51-20 |
|
no rank |
unclassified Proteobacteria |
| Firmicutes_C |
|
|
|
class |
Negativicutes |
| Firmicutes_A |
|
|
|
class |
Clostridia Rainey 2010 |
| Firmicutes_A |
|
|
Ruminococcus_B lactaris |
species |
Ruminococcus lactaris |
| Euryarchaeota |
|
|
|
phylum |
Chloroflexi |
| Euryarchaeota |
Methanobacteriaceae |
|
|
family |
Methanobacteriaceae |
| Euryarchaeota |
|
Methanobrevibacter_A |
|
genus |
Methanobrevibacter |
| Euryarchaeota |
|
|
Methanobrevibacter_A smithii |
species |
Methanobrevibacter smithii |
| Firmicutes_A |
|
Clostridium_A |
|
genus |
Clostridium |
| Firmicutes_C |
|
|
CAG-207 MIC2555 |
species |
Phascolarctobacterium sp. CAG:207 |
| Firmicutes_C |
|
CAG-207 |
|
species |
Phascolarctobacterium sp. CAG:207 |
| Desulfobacterota |
|
|
Bilophila wadsworthia |
species |
Bilophila wadsworthia |
| Firmicutes_A |
|
|
UBA738 MIC6254 |
species |
Clostridiales bacterium UBA738 |
| Firmicutes_A |
|
UBA738 |
|
species |
Clostridiales bacterium UBA738 |
| Firmicutes_A |
DTU089 |
|
|
species |
Clostridiales bacterium DTU089 |
| Firmicutes_A |
|
CAG-83 |
|
species |
Firmicutes bacterium CAG:83 |
| Firmicutes_A |
|
CAG-110 |
|
species |
Firmicutes bacterium CAG:110 |
| Firmicutes_A |
|
CAG-170 |
|
species |
Firmicutes bacterium CAG:170 |
| Firmicutes_A |
|
|
CAG-83 sp3 |
species |
Firmicutes bacterium CAG:83 |
| Firmicutes_A |
|
|
CAG-110 MIC5846 |
species |
Firmicutes bacterium CAG:110 |
| Firmicutes_A |
|
|
CAG-110 MIC5879 |
species |
Firmicutes bacterium CAG:110 |
| Firmicutes_A |
|
|
CAG-170 MIC1808 |
species |
Firmicutes bacterium CAG:170 |
| Firmicutes |
|
|
CAG-313 MIC4755 |
species |
Firmicutes bacterium CAG:313 |
| Firmicutes |
|
CAG-313 |
|
species |
Firmicutes bacterium CAG:313 |
| Firmicutes |
CAG-313 |
|
|
species |
Firmicutes bacterium CAG:313 |
| Firmicutes_A |
|
|
CAG-83 sp2 |
species |
Firmicutes bacterium CAG:83 |
| Proteobacteria |
|
|
CAG-495 MIC1775 |
species |
Proteobacteria bacterium CAG:495 |
| Proteobacteria |
|
|
CAG-495 MIC5080 |
species |
Proteobacteria bacterium CAG:495 |
| Proteobacteria |
|
|
CAG-495 MIC6162 |
species |
Proteobacteria bacterium CAG:495 |
| Proteobacteria |
|
CAG-495 |
|
species |
Proteobacteria bacterium CAG:495 |
| Verrucomicrobia |
Akkermansiaceae |
|
|
family |
Akkermansiaceae |
| Firmicutes_A |
|
|
CAG-349 sp1 |
species |
Clostridium sp. CAG:349 |
| Firmicutes_A |
|
|
CAG-273 sp1 |
species |
Clostridium sp. CAG:273 |
| Firmicutes_A |
|
|
CAG-226 MIC3942 |
species |
Clostridium sp. CAG:226 |
| Firmicutes_A |
|
CAG-226 |
|
species |
Clostridium sp. CAG:226 |
| Firmicutes_A |
|
CAG-273 |
|
species |
Clostridium sp. CAG:273 |
| Firmicutes_A |
|
CAG-349 |
|
species |
Clostridium sp. CAG:349 |
| Firmicutes_A |
CAG-508 |
|
|
species |
Clostridium sp. CAG:508 |
| Firmicutes_A |
CAG-138 |
|
|
species |
Clostridium sp. CAG:138 |
| Bacteroidetes |
|
|
|
phylum |
Bacteroidetes |
| Desulfobacterota |
|
|
|
class |
Bacteroidia |
| Proteobacteria |
Burkholderiaceae |
|
|
family |
Enterobacteriaceae |
| Proteobacteria |
|
Burkholderiaceae MIC4331 |
|
family |
Enterobacteriaceae |
| Proteobacteria |
|
|
Burkholderiaceae MIC4331 |
family |
Enterobacteriaceae |
| Firmicutes_A |
|
|
UBA1191 MIC5501 |
species |
Firmicutes bacterium UBA1191 |
| Firmicutes_A |
|
UBA1191 |
|
species |
Firmicutes bacterium UBA1191 |
| Firmicutes_A |
|
|
CAG-180 MIC374 |
species |
Eubacterium sp. CAG:180 |
| Firmicutes_A |
|
CAG-180 |
|
species |
Eubacterium sp. CAG:180 |
| Bacteroidetes |
Coprobacteraceae |
|
|
family |
Coriobacteriaceae |
| Firmicutes_A |
CAG-917 |
|
|
species |
Acidaminococcus sp. CAG:917 |
| Proteobacteria |
CAG-239 |
|
|
species |
Azospirillum sp. CAG:239 |
| Firmicutes_A |
|
|
CAG-177 sp1 |
species |
Ruminococcus sp. CAG:177 |
| Firmicutes_A |
|
|
CAG-382 MIC3624 |
species |
Ruminococcus sp. CAG:382 |
| Firmicutes_A |
CAG-382 |
|
|
species |
Ruminococcus sp. CAG:382 |
| Firmicutes_A |
|
CAG-177 |
|
species |
Ruminococcus sp. CAG:177 |
| Firmicutes_A |
|
CAG-382 MIC3624 |
|
species |
Ruminococcus sp. CAG:382 |
| Bacteroidetes |
Rikenellaceae |
|
|
family |
Rikenellaceae |
| Bacteroidetes |
Tannerellaceae |
|
|
family |
Tannerellaceae Ormerod et al. 2016 |
| Bacteroidetes |
Homeothermaceae |
|
|
family |
Candidatus Homeothermaceae |
| Bacteroidetes |
Bacteroidaceae |
|
|
family |
Bacteroidaceae |
| Bacteroidetes |
Barnesiellaceae |
|
|
family |
Barnesiellaceae |
| Bacteroidetes |
|
Alistipes |
|
genus |
Alistipes |
| Bacteroidetes |
|
Alistipes_A |
|
genus |
Alistipes |
| Firmicutes_A |
Ruminococcaceae |
|
|
family |
Ruminococcaceae |
| Firmicutes_A |
Anaerovoracaceae |
|
|
family |
Eubacteriaceae |
| Firmicutes_A |
Lachnospiraceae |
|
|
family |
Lachnospiraceae |
| Firmicutes_A |
Oscillospiraceae |
|
|
family |
Oscillospiraceae |
| Firmicutes_A |
|
Dorea |
|
genus |
Dorea |
| Firmicutes_A |
|
Anaerostipes |
|
genus |
Anaerostipes |
| Firmicutes_A |
|
Anaerotignum |
|
genus |
Anaerotignum |
| Firmicutes_A |
|
Blautia_A |
|
genus |
Blautia |
| Firmicutes_A |
Anaerotignaceae |
|
|
genus |
Anaerotignum |
| Firmicutes_A |
|
Fusicatenibacter |
|
genus |
Fusicatenibacter |
| Firmicutes_A |
|
|
Anaerotignum sp1 |
genus |
Anaerotignum |
| Firmicutes_A |
|
|
Blautia_A MIC5125 |
genus |
Blautia |
| Firmicutes_A |
|
|
Blautia_A MIC5792 |
genus |
Blautia |
| Firmicutes_A |
|
|
Blautia_A MIC807 |
genus |
Blautia |
| Firmicutes_A |
|
Agathobacter |
|
genus |
Agathobacter |
| Firmicutes_A |
|
|
Dorea MIC3163 |
genus |
Dorea |
| Firmicutes_A |
|
|
Dorea MIC5275 |
genus |
Dorea |
| Firmicutes_A |
|
|
Eubacterium_E MIC5144 |
genus |
Eubacterium |
| Firmicutes_A |
|
Eubacterium_E |
|
genus |
Eubacterium |
| Desulfobacterota |
|
Bilophila |
|
genus |
Bilophila |
| Firmicutes_A |
|
|
Anaerostipes hadrus |
species |
Anaerostipes hadrus |
| Desulfobacterota |
Desulfovibrionaceae |
|
|
family |
Desulfovibrionaceae |
| Firmicutes_A |
|
|
Oscillibacter MIC2940 |
genus |
Oscillibacter |
| Firmicutes_A |
|
|
Oscillibacter MIC5816 |
genus |
Oscillibacter |
| Firmicutes_A |
|
Oscillibacter |
|
genus |
Oscillibacter |
| Firmicutes_A |
|
|
Faecalibacterium prausnitzii_B |
species |
Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002 |
| Firmicutes_A |
|
|
Faecalibacterium prausnitzii_C |
species |
Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002 |
| Firmicutes_A |
|
|
Faecalibacterium prausnitzii_A |
species |
Faecalibacterium prausnitzii (Hauduroy et al. 1937) Duncan et al. 2002 |
| Bacteroidetes |
|
UBA6382 |
|
species |
Prevotellaceae bacterium UBA6382 |
| Bacteroidetes |
|
|
UBA6382 MIC4872 |
species |
Prevotellaceae bacterium UBA6382 |
| Bacteroidetes |
|
|
Alistipes finegoldii |
species |
Alistipes finegoldii |
| Bacteroidetes |
|
|
Alistipes inops |
species |
Alistipes inops |
| Bacteroidetes |
|
|
Alistipes obesi |
species |
DSM 25724 |
| Bacteroidetes |
|
|
Alistipes onderdonkii |
species |
Oscillibacter ruminantium |
| Bacteroidetes |
|
|
Alistipes putredinis |
species |
Alistipes putredinis |
| Bacteroidetes |
|
|
Alistipes senegalensis |
species |
Alistipes senegalensis Mishra et al. 2012 |
| Bacteroidetes |
|
|
Alistipes shahii |
species |
Alistipes shahii |
| Bacteroidetes |
|
|
Alistipes_A ihumii |
species |
Alistipes ihumii |
| Bacteroidetes |
|
|
Alistipes_A indistinctus |
species |
Alistipes indistinctus |
| Firmicutes_A |
|
|
CAG-727 MIC3188 |
species |
Acidiphilium sp. CAG:727 |
| Firmicutes_A |
|
CAG-727 MIC3188 |
|
species |
Acidiphilium sp. CAG:727 |
| Firmicutes_A |
CAG-727 |
|
|
species |
Acidiphilium sp. CAG:727 |
| Verrucomicrobia |
|
|
UBA11452 MIC5926 |
class |
Lentisphaeria |
| Verrucomicrobia |
|
UBA11452 |
|
class |
Lentisphaeria |
| Firmicutes_A |
|
|
CAG-74 MIC3751 |
species |
Faecalibacterium sp. CAG:74 |
| Firmicutes_A |
CAG-74 |
|
|
species |
Faecalibacterium sp. CAG:74 |
| Firmicutes_A |
|
CAG-74 MIC3751 |
|
species |
Faecalibacterium sp. CAG:74 |
| Firmicutes_A |
|
UBA4263 |
|
species |
Catabacter sp. UBA4263 |
| Firmicutes_A |
|
UBA5394 |
|
species |
Catabacter sp. UBA5394 |
| Firmicutes_A |
|
UBA7102 |
|
species |
Catabacter sp. UBA7102 |
| Firmicutes_A |
|
|
UBA4263 MIC1915 |
species |
Catabacter sp. UBA4263 |
| Firmicutes_A |
|
|
UBA5394 MIC3590 |
species |
Catabacter sp. UBA5394 |
| Firmicutes_A |
UBA1750 |
|
|
species |
Catabacter sp. UBA1750 |
| Firmicutes_A |
|
|
UBA7102 MIC468 |
species |
Catabacter sp. UBA7102 |
| Bacteroidetes |
|
|
Odoribacter splanchnicus |
species |
Odoribacter splanchnicus |
| Actinobacteria |
|
CAG-1427 |
|
species |
Eggerthella sp. CAG:1427 |
| Actinobacteria |
|
|
CAG-1427 MIC6313 |
species |
Eggerthella sp. CAG:1427 |
| Bacteroidetes |
|
|
UBA7173 MIC834 |
species |
Porphyromonadaceae bacterium UBA7173 |
| Bacteroidetes |
|
UBA7173 |
|
species |
Porphyromonadaceae bacterium UBA7173 |
| Bacteroidetes |
|
|
Parabacteroides distasonis |
species |
[Ruminococcus] gnavus |
| Bacteroidetes |
|
|
Parabacteroides merdae |
species |
Photorhabdus asymbiotica |
| Bacteroidetes |
|
|
Barnesiella intestinihominis |
species |
Barnesiella intestinihominis |
| Bacteroidetes |
|
|
UBA1820 MIC2188 |
species |
Flavobacteriales bacterium UBA1820 |
| Bacteroidetes |
|
UBA1820 |
|
species |
Flavobacteriales bacterium UBA1820 |
| Bacteroidetes |
UBA1820 |
|
|
species |
Flavobacteriales bacterium UBA1820 |
| Firmicutes_A |
|
|
ER4 sp1 |
species |
Oscillibacter sp. ER4 |
| Firmicutes_A |
|
|
ER4 MIC360 |
species |
Oscillibacter sp. ER4 |
| Firmicutes_A |
|
ER4 |
|
species |
Oscillibacter sp. ER4 |
| Firmicutes_A |
|
CAG-314 |
|
species |
Subdoligranulum sp. CAG:314 |
| Firmicutes_A |
CAG-314 |
|
|
species |
Subdoligranulum sp. CAG:314 |
| Firmicutes_A |
|
|
CAG-314 MIC230 |
species |
Subdoligranulum sp. CAG:314 |
| Firmicutes_A |
|
|
Subdoligranulum MIC5128 |
genus |
Subdoligranulum |
| Firmicutes_A |
|
|
Subdoligranulum MIC5784 |
genus |
Subdoligranulum |
| Firmicutes_A |
|
Anaeromassilibacillus |
|
genus |
Anaeromassilibacillus |
| Firmicutes_A |
|
|
Neglecta sp1 |
genus |
Neglecta |
| Firmicutes_A |
|
|
Anaeromassilibacillus MIC4671 |
genus |
Anaeromassilibacillus |
| Firmicutes_A |
|
Subdoligranulum |
|
genus |
Subdoligranulum |
| Firmicutes_A |
|
Faecalibacterium |
|
genus |
Faecalibacterium |
| Firmicutes_A |
|
Neglecta |
|
genus |
Neglecta |
| Firmicutes_A |
|
Ruminiclostridium_E |
|
species |
Eubacterium siraeum |
| Firmicutes_A |
|
|
Ruminiclostridium_E siraeum |
species |
Eubacterium siraeum |
| Firmicutes_A |
|
|
Clostridium_A leptum |
species |
Clostridium leptum |
| Firmicutes_A |
|
|
Blautia_A wexlerae |
species |
Blautia wexlerae |
| Firmicutes_A |
|
|
Blautia_A obeum_A |
species |
Blautia obeum |
| Firmicutes_A |
|
Ruminococcus_B |
|
species |
Ruminococcus gnavus |
| Bacteroidetes |
|
|
Butyricimonas synergistica_A |
species |
Butyricimonas synergistica |
| Firmicutes_A |
|
|
PeH17 sp1 |
no rank |
unclassified Christensenellaceae |
| Firmicutes_A |
|
PeH17 |
|
no rank |
unclassified Christensenellaceae |
| Proteobacteria |
|
Duodenibacillus |
|
genus |
Duodenibacillus |
| Proteobacteria |
|
|
Duodenibacillus MIC362 |
genus |
Duodenibacillus |
| Bacteroidetes |
|
|
Coprobacter secundus |
species |
Barnesiella sp. 177 |
| Verrucomicrobia |
UBA1829 |
|
|
species |
Lentisphaeria bacterium |
| Firmicutes_A |
|
|
Fusicatenibacter saccharivorans |
species |
Fusicatenibacter saccharivorans |
| Actinobacteria |
Eggerthellaceae |
|
|
family |
Eggerthellaceae |
| Actinobacteria |
|
Adlercreutzia |
|
genus |
Adlercreutzia |
| Actinobacteria |
|
|
Adlercreutzia MIC5417 |
genus |
Adlercreutzia |
| Verrucomicrobia |
|
|
Akkermansia MIC3622 |
genus |
Akkermansia |
| Verrucomicrobia |
|
Akkermansia |
|
genus |
Akkermansia |
| Verrucomicrobia |
|
|
|
phylum |
Verrucomicrobia |
| Firmicutes |
|
|
|
phylum |
Bacillus/Clostridium group |
| Actinobacteria |
|
|
|
phylum |
Actinobacteria |
| Firmicutes_C |
Acidaminococcaceae |
|
|
family |
Acidaminococcaceae |
| Bacteroidetes |
|
|
Butyricimonas MIC1139 |
genus |
Butyricimonas |
| Bacteroidetes |
|
Odoribacter |
|
genus |
Odoribacter |
| Bacteroidetes |
|
Butyricimonas |
|
genus |
Butyricimonas |
| Bacteroidetes |
Marinifilaceae |
|
|
family |
Marinifilaceae |
| Bacteroidetes |
|
Coprobacter |
|
genus |
Coprobacter |
| Bacteroidetes |
|
Barnesiella |
|
genus |
Barnesiella |
| Bacteroidetes |
|
Parabacteroides |
|
genus |
Parabacteroides |
| Firmicutes_A |
|
|
Ruminiclostridium_C MIC856 |
genus |
Ruminiclostridium |
| Firmicutes_A |
|
Ruminiclostridium_C |
|
genus |
Ruminiclostridium |
| Firmicutes_A |
|
D16 |
|
species |
Ruminococcaceae bacterium D16 |
| Firmicutes_A |
|
|
D16 phoceensis |
species |
Ruminococcaceae bacterium D16 |