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Citizen Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a symptom. There are many bacteria involved. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is based on associations discovered from annotated 16s microbiome samples. See this post for more information.

SymptomImpactPredictor of Bacteria Shift
Blood Type: A PositiveWorsen1.86
Blood Type: O PositiveWorsen1.86
Comorbid-Mouth: Dry MouthImproves-2.74
Comorbid: Histamine or Mast Cell issuesImproves-1.7
Comorbid: Inflammatory bowel disease Worsen1.86
Comorbid: MigraineWorsen1.86
DePaul University Fatigue Questionnaire : FatigueWorsen1.86
DePaul University Fatigue Questionnaire : Unrefreshing Sleep, that is waking up feeling tired Worsen1.86
General: HeadachesImproves-1.62
Joint: Stiffness and swellingImproves-1.7
Neuroendocrine Manifestations: Excessive adrenalineImproves-1.68
Neuroendocrine: Alcohol intoleranceImproves-1.7
Neuroendocrine: Feeling like you have a low temperatureImproves-2.74
Neurological: emotional overloadImproves-2.74
Neurological: fasciculations Improves-2.74
Neurological: High degree of Empathy before onsetImproves-2.74
Neurological: Short-term memory issuesImproves-2.74
Neurological: Slowed speechImproves-1.61
Neurological: Spatial instability and disorientationImproves-2.74
Official Diagnosis: Mast Cell DysfunctionImproves-1.7
Post-exertional malaise: GeneralImproves-2.74
Post-exertional malaise: Mentally tired after the slightest effortImproves-2.74
Post-exertional malaise: Physically drained or sick after mild activityImproves-2.74
Post-exertional malaise: Post-exertional malaiseImproves-2.74
Post-exertional malaise: Rapid cognitive fatigability, Improves-2.74
Post-exertional malaise: Worsening of symptoms after mild mental activityImproves-2.74
Sleep: Problems staying asleepImproves-1.7

Published Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a medical condition. There are many bacteria. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is according to the microbiome shifts reported in studies. Clinical studies may show different results

SymptomImpactPredictor of Bacteria Shift
AllergiesImproves-2.74
Amyotrophic lateral sclerosis (ALS) Motor NeuronImproves-2.74
Ankylosing spondylitisImproves-4.03
AsthmaImproves-2.74
AtherosclerosisWorsen4.58
AutismImproves-1.71
Brain TraumaWorsen3.31
CarcinomaWorsen3.18
Celiac DiseaseWorsen0
Chronic Fatigue SyndromeWorsen3.24
Chronic Kidney DiseaseWorsen3.74
Chronic urticaria (Hives)Improves-1.4
Colorectal CancerWorsen3.59
Coronary artery disease Improves-1.44
Crohn's DiseaseWorsen3.92
DepressionWorsen3.86
EpilepsyWorsen3.31
Generalized anxiety disorderWorsen3.69
Graves' diseaseImproves-2.74
Histamine IssuesWorsen3.58
Histamine Issues From UbiomeImproves-1.61
IgA nephropathy (IgAN)Worsen2.4
Inflammatory Bowel DiseaseWorsen3.88
Irritable Bowel SyndromeWorsen2.56
Liver CirrhosisWorsen2.92
ME/CFS without IBSWorsen1.7
Mood DisordersWorsen2.74
ObesityWorsen4.04
OsteoporosisWorsen3.02
Parkinson's DiseaseImproves-2.55
Rheumatoid arthritisWorsen3.81
rheumatoid arthritis (RA),Spondyloarthritis (SpA)Worsen2.25
RosaceaImproves-2.44
SchizophreniaImproves-2.74
SclerosisWorsen1.96
Sjögren syndromeWorsen3.02
Small Intestinal Bacterial Overgrowth (SIBO)Worsen3.22
Stress / posttraumatic stress disorderWorsen3.68
Systemic Lupus ErythematosusWorsen2.96
Type 2 DiabetesWorsen4.49
Ulcerative colitisImproves-3.15

Bacteria Impacted

Suggest a missed study:

We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.

📓 - direct citation | 👪 - Impacts Parent Taxa | 👶 - Impacts Child Taxa | 🧙 - Inferred
Taxonomy Rank Effect Citations
Budviciaceae family Increases 📓 Source Study
Enterobacteriaceae family Increases 📓 Source Study
Enterobacteriaceae family Increases 📓 Source Study
Erwiniaceae family Increases 📓 Source Study
Pectobacteriaceae family Increases 📓 Source Study
Ruminococcaceae family Increases 📓 Source Study
Ruminococcaceae family Increases 📓 Source Study
Yersiniaceae family Increases 📓 Source Study
Acetanaerobacterium genus Increases 👪 Source Study
Agathobaculum genus Increases 👪 Source Study
Anaerofilum genus Increases 👪 Source Study
Anaeromassilibacillus genus Increases 👪 Source Study
Angelakisella genus Increases 👪 Source Study
aphid P-endosymbionts genus Increases 👪 Source Study
Atlantibacter genus Increases 👪 Source Study
Biostraticola genus Increases 👪 Source Study
Bittarella genus Increases 👪 Source Study
Brenneria genus Increases 👪 Source Study
Buttiauxella genus Increases 👪 Source Study
Candidatus Ishikawaella genus Increases 👪 Source Study
Candidatus Soleaferrea genus Increases 👪 Source Study
Caproiciproducens genus Increases 👪 Source Study
Cedecea genus Increases 👪 Source Study
Chania genus Increases 👪 Source Study
Dickeya genus Increases 👪 Source Study
Erwinia genus Increases 👪 Source Study
Ethanoligenens genus Increases 👪 Source Study
Flavonifractor genus Increases 👪 Source Study
Fournierella genus Increases 👪 Source Study
Fukatsuia genus Increases 👪 Source Study
Gemmiger genus Increases 👪 Source Study
Gibbsiella genus Increases 👪 Source Study
Gorbachella genus Increases 👪 Source Study
Hydrogenoanaerobacterium genus Increases 👪 Source Study
Kosakonia genus Increases 👪 Source Study
Leclercia genus Increases 👪 Source Study
Lelliottia genus Increases 👪 Source Study
Leminorella genus Increases 👪 Source Study
Limnobaculum genus Increases 👪 Source Study
Metakosakonia genus Increases 👪 Source Study
Mixta genus Increases 👪 Source Study
Moranella genus Increases 👪 Source Study
Negativibacillus genus Increases 👪 Source Study
Neglecta genus Increases 👪 Source Study
Nissabacter genus Increases 👪 Source Study
Pantoea genus Increases 👪 Source Study
Papillibacter genus Increases 👪 Source Study
Pectobacterium genus Increases 👪 Source Study
Phocea genus Increases 👪 Source Study
Pluralibacter genus Increases 👪 Source Study
Pragia genus Increases 👪 Source Study
Pseudescherichia genus Increases 👪 Source Study
Pseudoflavonifractor genus Increases 👪 Source Study
Rahnella genus Increases 👪 Source Study
Raoultella genus Increases 👪 Source Study
Riesia genus Increases 👪 Source Study
Rosenbergiella genus Increases 👪 Source Study
Ruthenibacterium genus Increases 👪 Source Study
Shimwellia genus Increases 👪 Source Study
Siccibacter genus Increases 👪 Source Study
Sodalis genus Increases 👪 Source Study
Sporobacter genus Increases 👪 Source Study
Tatumella genus Increases 👪 Source Study
Wigglesworthia genus Increases 👪 Source Study
Yokenella genus Increases 👪 Source Study
Brenneria genus Increases 📓 Source Study
Buttiauxella genus Increases 📓 Source Study
Chania genus Increases 📓 Source Study
Citrobacter genus Increases 📓 Source Study
Cloaca genus Increases 📓 Source Study
Cronobacter genus Increases 📓 Source Study
Erwinia genus Increases 📓 Source Study
Escherichia genus Increases 📓 Source Study
Hafnia genus Increases 📓 Source Study
Klebsiella genus Increases 📓 Source Study
Kluyvera genus Increases 📓 Source Study
Kosakonia genus Increases 📓 Source Study
Morganella genus Increases 📓 Source Study
Pantoea genus Increases 📓 Source Study
Pectobacterium genus Increases 📓 Source Study
Pluralibacter genus Increases 📓 Source Study
Pragia genus Increases 📓 Source Study
Proteus genus Increases 📓 Source Study
Providencia genus Increases 📓 Source Study
Rahnella genus Increases 📓 Source Study
Raoultella genus Increases 📓 Source Study
Ruminiclostridium genus Increases 📓 Source Study
Ruminiclostridium genus Increases 📓 Source Study
Salmonella genus Increases 📓 Source Study
Serratia genus Increases 📓 Source Study
Shigella genus Increases 📓 Source Study
unclassified Ruminococcaceae genus Increases 📓 Source Study
unclassified Ruminococcaceae genus Increases 📓 Source Study
Yersinia genus Increases 📓 Source Study
unclassified Enterobacteriaceae no rank Increases 📓 Source Study
Clostridiales order Increases 📓 Source Study
Firmicutes phylum Decreases 📓 Source Study
[Clostridium] cellobioparum species Increases 👪 Source Study
[Clostridium] cellulosi species Increases 👪 Source Study
[Clostridium] hungatei species Increases 👪 Source Study
[Clostridium] methylpentosum species Increases 👪 Source Study
[Clostridium] sporosphaeroides species Increases 👪 Source Study
[Clostridium] viride species Increases 👪 Source Study
[Eubacterium] siraeum species Increases 👪 Source Study
Angelakisella massiliensis species Increases 👪 Source Study
ATCC 29909 species Increases 👪 Source Study
ATCC 33028 species Increases 👪 Source Study
ATCC 33077 species Increases 👪 Source Study
ATCC 33110 species Increases 👪 Source Study
ATCC 33257 species Increases 👪 Source Study
ATCC 33641 species Increases 👪 Source Study
ATCC 33673 species Increases 👪 Source Study
ATCC 35236 species Increases 👪 Source Study
ATCC 35319 species Increases 👪 Source Study
ATCC 35469 species Increases 👪 Source Study
ATCC 43380 species Increases 👪 Source Study
ATCC 43975 species Increases 👪 Source Study
ATCC 51112 species Increases 👪 Source Study
ATCC 8700 species Increases 👪 Source Study
ATCC BAA-1589 species Increases 👪 Source Study
ATCC BAA-2403 species Increases 👪 Source Study
Bacterium sonnei Levine 1920 species Increases 👪 Source Study
BCC 105 species Increases 👪 Source Study
BCC 571 species Increases 👪 Source Study
BCC 845 species Increases 👪 Source Study
Brenneria alni species Increases 👪 Source Study
Brenneria nigrifluens species Increases 👪 Source Study
Brenneria rubrifaciens species Increases 👪 Source Study
Brenneria salicis species Increases 👪 Source Study
Brenneria sp. EniD312 species Increases 👪 Source Study
Buttiauxella sp. 3AFRM03 species Increases 👪 Source Study
CCOS 903 species Increases 👪 Source Study
CCUG 45998 A species Increases 👪 Source Study
CCUG 50898 species Increases 👪 Source Study
CECT 314 species Increases 👪 Source Study
CECT 7864 species Increases 👪 Source Study
CFBP 8475 species Increases 👪 Source Study
CGMCC 1.7012 species Increases 👪 Source Study
Chania multitudinisentens species Increases 👪 Source Study
CIP 106121 species Increases 👪 Source Study
CIP 110771 species Increases 👪 Source Study
Citrobacter amalonaticus species Increases 👪 Source Study
Citrobacter sp. species Increases 👪 Source Study
Citrobacter sp. BW4 species Increases 👪 Source Study
Citrobacter sp. HD4.9 species Increases 👪 Source Study
Cronobacter sakazakii species Increases 👪 Source Study
DSM 105255 species Increases 👪 Source Study
DSM 14437 species Increases 👪 Source Study
DSM 14987 species Increases 👪 Source Study
DSM 29888 species Increases 👪 Source Study
DSM 4782 species Increases 👪 Source Study
Enterobacter mori species Increases 👪 Source Study
Enterobacter oryzaendophyticus species Increases 👪 Source Study
Enterobacter sp. species Increases 👪 Source Study
Enterobacter sp. 638 species Increases 👪 Source Study
Enterobacter sp. A7 species Increases 👪 Source Study
Enterobacter sp. BS2-1 species Increases 👪 Source Study
Enterobacter sp. c112(2012) species Increases 👪 Source Study
Enterobacter sp. CRRI 3 species Increases 👪 Source Study
Enterobacter sp. E20 species Increases 👪 Source Study
Enterobacter sp. FY-07 species Increases 👪 Source Study
Enterobacter sp. R4-368 species Increases 👪 Source Study
Enterobacter sp. RF-100 species Increases 👪 Source Study
Enterobacter sp. SA187 species Increases 👪 Source Study
Enterobacter sp. SCSS species Increases 👪 Source Study
Enterobacter sp. SPSA1 species Increases 👪 Source Study
Enterobacter sp. UDC345 species Increases 👪 Source Study
Erwinia amylovora species Increases 👪 Source Study
Erwinia piriflorinigrans species Increases 👪 Source Study
Erwinia rhapontici species Increases 👪 Source Study
Erwinia tracheiphila species Increases 👪 Source Study
Escherichia albertii species Increases 👪 Source Study
Escherichia citrophila (Asai et al. 1957) Asai et al. 1962 species Increases 👪 Source Study
Escherichia coli Biovare species Increases 👪 Source Study
Escherichia marmotae species Increases 👪 Source Study
Escherichia sp. species Increases 👪 Source Study
Escherichia sp. 1_1_43 species Increases 👪 Source Study
Escherichia sp. 4_1_40B species Increases 👪 Source Study
JCM 1658 species Increases 👪 Source Study
Klebsiella ornithinolytica species Increases 👪 Source Study
Klebsiella planticola species Increases 👪 Source Study
Klebsiella sp. species Increases 👪 Source Study
Klebsiella sp. B12 species Increases 👪 Source Study
Klebsiella sp. FDAARGOS_511 species Increases 👪 Source Study
Klebsiella sp. M5al species Increases 👪 Source Study
Klebsiella sp. OBRC7 species Increases 👪 Source Study
Klebsiella sp. SOR89 species Increases 👪 Source Study
Klebsiella sp. WCHKl090001 species Increases 👪 Source Study
Klebsiella variicola species Increases 👪 Source Study
Kluyvera ascorbata species Increases 👪 Source Study
Kluyvera georgiana species Increases 👪 Source Study
Kluyvera sp. SR5.1 species Increases 👪 Source Study
LMG:23823 species Increases 👪 Source Study
LMG:23826 species Increases 👪 Source Study
LMG:23827 species Increases 👪 Source Study
LMG:2665 species Increases 👪 Source Study
LMG:7884 species Increases 👪 Source Study
Pantoea agglomerans group species Increases 👪 Source Study
Pantoea alhagi species Increases 👪 Source Study
Pantoea carbekii species Increases 👪 Source Study
Pantoea cypripedii species Increases 👪 Source Study
Pantoea dispersa species Increases 👪 Source Study
Pantoea sp. CWB304 species Increases 👪 Source Study
Pantoea sp. PSNIH1 species Increases 👪 Source Study
Pantoea stewartii species Increases 👪 Source Study
Pectobacterium carotovorum species Increases 👪 Source Study
Pluralibacter pyrinus species Increases 👪 Source Study
Pragia fontium species Increases 👪 Source Study
Pragia sp. CF-458 species Increases 👪 Source Study
Proteus penneri species Increases 👪 Source Study
Proteus sp. 3163O2 species Increases 👪 Source Study
Proteus sp. DL4.8 species Increases 👪 Source Study
Providencia alcalifaciens species Increases 👪 Source Study
Providencia heimbachae species Increases 👪 Source Study
Providencia rettgeri species Increases 👪 Source Study
Providencia sp. WCHPr000369 species Increases 👪 Source Study
Providencia stuartii species Increases 👪 Source Study
Rahnella sp. ERMR1:05 species Increases 👪 Source Study
Rahnella sp. FB303 species Increases 👪 Source Study
Raoultella sp. species Increases 👪 Source Study
Ruminiclostridium sp. species Increases 👪 Source Study
Salmonella sp. 111 species Increases 👪 Source Study
Serratia ficaria species Increases 👪 Source Study
Serratia marinorubra species Increases 👪 Source Study
Serratia nematodiphila species Increases 👪 Source Study
Serratia plymuthica species Increases 👪 Source Study
Serratia sp. 3ACOL1 species Increases 👪 Source Study
Serratia sp. ATCC 39006 species Increases 👪 Source Study
Serratia sp. FGI94 species Increases 👪 Source Study
Serratia sp. P2ACOL2 species Increases 👪 Source Study
Serratia sp. ST9 species Increases 👪 Source Study
Serratia sp. YD25 species Increases 👪 Source Study
Serratia symbiotica species Increases 👪 Source Study
Serratia ureilytica species Increases 👪 Source Study
Shigella dysenteriae species Increases 👪 Source Study
strain SCF1 species Increases 👪 Source Study
Yersinia ruckeri species Increases 👪 Source Study
[Clostridium] leptum species Increases 📓 Source Study
[Clostridium] leptum species Increases 📓 Source Study
Kluyvera georgiana species Increases 📓 Source Study
Kluyvera sp. SR5.1 species Increases 📓 Source Study

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