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Citizen Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a symptom. There are many bacteria involved. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is based on associations discovered from annotated 16s microbiome samples. See this post for more information.

SymptomImpactPredictor of Bacteria Shift
DePaul University Fatigue Questionnaire : Difficulty falling asleepWorsen2.69
Neuroendocrine: Feeling like you have a low temperatureImproves-2.74
Neurological: emotional overloadImproves-2.74
Neurological: fasciculations Improves-3.45
Neurological: High degree of Empathy before onsetImproves-2.74
Neurological: Short-term memory issuesImproves-2.74
Neurological: Spatial instability and disorientationImproves-2.74
Onset: less than 02 years since onsetImproves-2.74
Post-exertional malaise: Worsening of symptoms after mild mental activityImproves-2.74

Published Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a medical condition. There are many bacteria. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is according to the microbiome shifts reported in studies. Clinical studies may show different results

SymptomImpactPredictor of Bacteria Shift
AllergiesImproves-2.74
Amyotrophic lateral sclerosis (ALS) Motor NeuronWorsen2.64
Ankylosing spondylitisImproves-3.83
AsthmaWorsen0
AtherosclerosisWorsen2.92
AutismWorsen2.06
Bipolar DisorderImproves-2.43
Brain TraumaWorsen2.74
Celiac DiseaseWorsen0
Chronic Fatigue SyndromeWorsen3.08
Chronic LymeWorsen2.74
Colorectal CancerImproves-2.43
COVID-19Worsen3.25
Crohn's DiseaseWorsen3.61
cystic fibrosisWorsen2.97
DepressionWorsen3.83
EczemaWorsen3.8
Graves' diseaseImproves-0.6
Histamine IssuesWorsen2.66
Hyperlipidemia (High Blood Fats)Worsen2.84
IgA nephropathy (IgAN)Worsen2.74
Inflammatory Bowel DiseaseWorsen2.43
Irritable Bowel SyndromeWorsen3.4
Liver CirrhosisWorsen3
ME/CFS without IBSWorsen3.08
Mood DisordersWorsen2.74
Multiple SclerosisWorsen3.08
Multiple system atrophy (MSA)Improves-1.55
Nonalcoholic Fatty Liver Disease (nafld) NonalcoholicWorsen4.29
NonCeliac Gluten SensitivityWorsen2.68
ObesityWorsen2.96
Parkinson's DiseaseWorsen3.02
rheumatoid arthritis (RA),Spondyloarthritis (SpA)Worsen3.53
RosaceaImproves-2.44
SchizophreniaImproves-2.74
Stress / posttraumatic stress disorderWorsen3.83
Systemic Lupus ErythematosusWorsen3.45
Type 1 DiabetesImproves-2.69
Type 2 DiabetesWorsen3.45
Ulcerative colitisWorsen3.06

Bacteria Impacted

Suggest a missed study:

We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.

📓 - direct citation | 👪 - Impacts Parent Taxa | 👶 - Impacts Child Taxa | 🧙 - Inferred
Taxonomy Rank Effect Citations
Gammaproteobacteria class Increases 📓 Source Study
Enterobacteriaceae family Increases 📓 Source Study
Mycobacteriaceae family Increases 📓 Source Study
Pasteurellaceae family Increases 📓 Source Study
Pseudomonadaceae family Increases 📓 Source Study
Actinobacillus genus Increases 👪 Source Study
Aggregatibacter genus Increases 👪 Source Study
Atlantibacter genus Increases 👪 Source Study
Avibacterium genus Increases 👪 Source Study
Basfia genus Increases 👪 Source Study
Bibersteinia genus Increases 👪 Source Study
Biostraticola genus Increases 👪 Source Study
Bisgaardia genus Increases 👪 Source Study
Buttiauxella genus Increases 👪 Source Study
Candidatus Ishikawaella genus Increases 👪 Source Study
Candidatus Moranella genus Increases 👪 Source Study
Candidatus Riesia genus Increases 👪 Source Study
Cedecea genus Increases 👪 Source Study
Gallibacterium genus Increases 👪 Source Study
Gibbsiella genus Increases 👪 Source Study
Glaesserella genus Increases 👪 Source Study
Histophilus genus Increases 👪 Source Study
Hoyosella genus Increases 👪 Source Study
Kosakonia genus Increases 👪 Source Study
Leclercia genus Increases 👪 Source Study
Lelliottia genus Increases 👪 Source Study
Limnobaculum genus Increases 👪 Source Study
MAC genus Increases 👪 Source Study
Mannheimia genus Increases 👪 Source Study
Metakosakonia genus Increases 👪 Source Study
Mycobacterium chelonae complex genus Increases 👪 Source Study
Mycobacterium complex genus Increases 👪 Source Study
Mycobacterium terrae complex genus Increases 👪 Source Study
Mycolicibacterium genus Increases 👪 Source Study
Necropsobacter genus Increases 👪 Source Study
Nicoletella genus Increases 👪 Source Study
Oblitimonas genus Increases 👪 Source Study
Otariodibacter genus Increases 👪 Source Study
Pasteurella genus Increases 👪 Source Study
Permianibacter genus Increases 👪 Source Study
Pluralibacter genus Increases 👪 Source Study
Pseudescherichia genus Increases 👪 Source Study
Pseudomonas chlororaphis group genus Increases 👪 Source Study
Raoultella genus Increases 👪 Source Study
Rodentibacter genus Increases 👪 Source Study
Rosenbergiella genus Increases 👪 Source Study
Rugamonas genus Increases 👪 Source Study
Shimwellia genus Increases 👪 Source Study
Siccibacter genus Increases 👪 Source Study
Ursidibacter genus Increases 👪 Source Study
Volucribacter genus Increases 👪 Source Study
Yokenella genus Increases 👪 Source Study
Actinobacillus genus Increases 📓 Source Study
Levinea Young et al. 1971 genus Increases 📓 Source Study
Mycobacterium genus Increases 📓 Source Study
Pseudomonas genus Increases 📓 Source Study
Achromobacter georgiopolitanum species Increases 👪 Source Study
Actinobacillus arthritidis species Increases 👪 Source Study
Actinobacillus delphinicola species Increases 👪 Source Study
Actinobacillus minor species Increases 👪 Source Study
Actinobacillus pleuropneumoniae species Increases 👪 Source Study
Actinobacillus porcinus species Increases 👪 Source Study
Actinobacillus porcitonsillarum species Increases 👪 Source Study
Actinobacillus scotiae species Increases 👪 Source Study
Actinobacillus succinogenes species Increases 👪 Source Study
Actinobacillus suis species Increases 👪 Source Study
ATCC 29548 species Increases 👪 Source Study
Citrobacter amalonaticus species Increases 👪 Source Study
Citrobacter farmeri species Increases 👪 Source Study
Citrobacter koseri species Increases 👪 Source Study
Citrobacter sp. species Increases 👪 Source Study
Citrobacter sp. BW4 species Increases 👪 Source Study
Citrobacter sp. HD4.9 species Increases 👪 Source Study
DSM 5568 species Increases 👪 Source Study
DSM 6978 species Increases 👪 Source Study
fluorescent pseudomonads species Increases 👪 Source Study
JCM 18565 species Increases 👪 Source Study
KCTC 32541 species Increases 👪 Source Study
Mycobacterium dioxanotrophicus species Increases 👪 Source Study
Mycobacterium kansasii species Increases 👪 Source Study
Mycobacterium simiae complex species Increases 👪 Source Study
Mycobacterium sp. BJC15-C31 species Increases 👪 Source Study
Mycobacterium sp. CRRI 4 species Increases 👪 Source Study
Mycobacterium sp. djl-10 species Increases 👪 Source Study
Mycobacterium sp. DL90 species Increases 👪 Source Study
Mycobacterium sp. EPa45 species Increases 👪 Source Study
Mycobacterium sp. FI 1033 species Increases 👪 Source Study
Mycobacterium sp. JS623 species Increases 👪 Source Study
Mycobacterium sp. KNUC287 species Increases 👪 Source Study
Mycobacterium sp. KNUC297 species Increases 👪 Source Study
Mycobacterium sp. MS1601 species Increases 👪 Source Study
Mycobacterium sp. UNC410CL29Cvi84 species Increases 👪 Source Study
Pseudomonas arsenicoxydans species Increases 👪 Source Study
Pseudomonas brassicacearum species Increases 👪 Source Study
Pseudomonas denitrificans ATCC 13867 species Increases 👪 Source Study
Pseudomonas entomophila species Increases 👪 Source Study
Pseudomonas extremaustralis species Increases 👪 Source Study
Pseudomonas frederiksbergensis species Increases 👪 Source Study
Pseudomonas gingeri species Increases 👪 Source Study
Pseudomonas graminis species Increases 👪 Source Study
Pseudomonas granadensis species Increases 👪 Source Study
Pseudomonas guangdongensis species Increases 👪 Source Study
Pseudomonas koreensis species Increases 👪 Source Study
Pseudomonas litoralis species Increases 👪 Source Study
Pseudomonas moraviensis species Increases 👪 Source Study
Pseudomonas oryzae species Increases 👪 Source Study
Pseudomonas parafulva species Increases 👪 Source Study
Pseudomonas pohangensis species Increases 👪 Source Study
Pseudomonas prosekii species Increases 👪 Source Study
Pseudomonas psychrotolerans species Increases 👪 Source Study
Pseudomonas putida group species Increases 👪 Source Study
Pseudomonas reinekei species Increases 👪 Source Study
Pseudomonas sabulinigri species Increases 👪 Source Study
Pseudomonas salegens species Increases 👪 Source Study
Pseudomonas saponiphila species Increases 👪 Source Study
Pseudomonas saudiphocaensis species Increases 👪 Source Study
Pseudomonas sihuiensis species Increases 👪 Source Study
Pseudomonas soli species Increases 👪 Source Study
Pseudomonas sp. 02C 26 species Increases 👪 Source Study
Pseudomonas sp. 31-12 species Increases 👪 Source Study
Pseudomonas sp. 7SR1 species Increases 👪 Source Study
Pseudomonas sp. a101-18-2 species Increases 👪 Source Study
Pseudomonas sp. a111-5 species Increases 👪 Source Study
Pseudomonas sp. ACM7 species Increases 👪 Source Study
Pseudomonas sp. CC6-YY-74 species Increases 👪 Source Study
Pseudomonas sp. CMR12a species Increases 👪 Source Study
Pseudomonas sp. CMR5c species Increases 👪 Source Study
Pseudomonas sp. DQ-01 species Increases 👪 Source Study
Pseudomonas sp. DTU12.3 species Increases 👪 Source Study
Pseudomonas sp. DY-1 species Increases 👪 Source Study
Pseudomonas sp. G1116 species Increases 👪 Source Study
Pseudomonas sp. GmFRB023 species Increases 👪 Source Study
Pseudomonas sp. KB23 species Increases 👪 Source Study
Pseudomonas sp. KVS86 species Increases 👪 Source Study
Pseudomonas sp. LH1G9 species Increases 👪 Source Study
Pseudomonas sp. LPH1 species Increases 👪 Source Study
Pseudomonas sp. LTJR-52 species Increases 👪 Source Study
Pseudomonas sp. MFY143 species Increases 👪 Source Study
Pseudomonas sp. MRSN12121 species Increases 👪 Source Study
Pseudomonas sp. MT-1 species Increases 👪 Source Study
Pseudomonas sp. NS1(2017) species Increases 👪 Source Study
Pseudomonas sp. PcFRB072 species Increases 👪 Source Study
Pseudomonas sp. PcFRB119 species Increases 👪 Source Study
Pseudomonas sp. PONIH3 species Increases 👪 Source Study
Pseudomonas sp. ps4-2 species Increases 👪 Source Study
Pseudomonas sp. QZS01 species Increases 👪 Source Study
Pseudomonas sp. R4-34-07 species Increases 👪 Source Study
Pseudomonas sp. R5-89-07 species Increases 👪 Source Study
Pseudomonas sp. RU47 species Increases 👪 Source Study
Pseudomonas sp. S-6-2 species Increases 👪 Source Study
Pseudomonas sp. StFLB209 species Increases 👪 Source Study
Pseudomonas sp. SWI36 species Increases 👪 Source Study
Pseudomonas sp. TCU-HL1 species Increases 👪 Source Study
Pseudomonas sp. TMW 2.1634 species Increases 👪 Source Study
Pseudomonas sp. URMO17WK12:I11 species Increases 👪 Source Study
Pseudomonas sp. WCS374 species Increases 👪 Source Study
Pseudomonas stutzeri group species Increases 👪 Source Study
Pseudomonas syringae group species Increases 👪 Source Study
Pseudomonas umsongensis species Increases 👪 Source Study
Pseudomonas versuta species Increases 👪 Source Study
Pseudomonas xinjiangensis species Increases 👪 Source Study
Pseudomonas yamanorum species Increases 👪 Source Study

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