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Citizen Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a symptom. There are many bacteria involved. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is based on associations discovered from annotated 16s microbiome samples. See this post for more information.

SymptomImpactPredictor of Bacteria Shift
Autonomic Manifestations: cardiac arrhythmiasImproves-3.5
DePaul University Fatigue Questionnaire : Unrefreshing Sleep, that is waking up feeling tired Worsen2.85

Published Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a medical condition. There are many bacteria. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is according to the microbiome shifts reported in studies. Clinical studies may show different results

SymptomImpactPredictor of Bacteria Shift
Ankylosing spondylitisWorsen3.24
AtherosclerosisWorsen3.44
AutismImproves-3.89
Barrett esophagus cancerImproves-2.83
CarcinomaWorsen2.83
Celiac DiseaseImproves-0.21
Chronic Fatigue SyndromeWorsen3.63
Chronic urticaria (Hives)Worsen2.83
Colorectal CancerImproves-1.89
Crohn's DiseaseWorsen3.87
cystic fibrosisWorsen2.43
DepressionWorsen3.5
EpilepsyWorsen3.36
Gastroesophageal reflux disease (Gerd) including Barrett's esophagusImproves-3.46
Generalized anxiety disorderWorsen2.71
High Blood PressureImproves-2.54
Histamine IssuesWorsen3.22
IgA nephropathy (IgAN)Improves-2.54
Inflammatory Bowel DiseaseWorsen4.2
Irritable Bowel SyndromeWorsen0
Liver CirrhosisWorsen3.78
ME/CFS with IBSWorsen3.5
ME/CFS without IBSWorsen3.98
Multiple SclerosisWorsen3.98
ObesityWorsen2.83
Parkinson's DiseaseImproves-2.85
PsoriasisWorsen3.36
Rheumatoid arthritisImproves-4.01
rheumatoid arthritis (RA),Spondyloarthritis (SpA)Worsen3.14
Sjögren syndromeWorsen2.83
Small Intestinal Bacterial Overgrowth (SIBO)Worsen3.36
Stress / posttraumatic stress disorderWorsen3.59
Type 1 DiabetesImproves-2.83
Type 2 DiabetesImproves-2.63
Ulcerative colitisWorsen2.54

Bacteria Impacted

Suggest a missed study:

We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.

📓 - direct citation | 👪 - Impacts Parent Taxa | 👶 - Impacts Child Taxa | 🧙 - Inferred
Taxonomy Rank Effect Citations
Enterococcaceae family Increases 📓 Source Study
Pseudomonadaceae family Increases 📓 Source Study
Streptococcaceae family Increases 📓 Source Study
Catellicoccus genus Increases 👪 Source Study
Lactovum genus Increases 👪 Source Study
Melissococcus genus Increases 👪 Source Study
Oblitimonas genus Increases 👪 Source Study
Permianibacter genus Increases 👪 Source Study
Pilibacter genus Increases 👪 Source Study
Pseudomonas chlororaphis group genus Increases 👪 Source Study
Rugamonas genus Increases 👪 Source Study
Tetragenococcus genus Increases 👪 Source Study
Vagococcus genus Increases 👪 Source Study
Enterococcus genus Increases 📓 Source Study
Pseudomonas genus Increases 📓 Source Study
Streptococcus genus Increases 📓 Source Study
Achromobacter georgiopolitanum species Increases 👪 Source Study
ACM 3611 species Increases 👪 Source Study
Arthrobacter sp. BDR2P1B1-M species Increases 👪 Source Study
ATCC 19436 species Increases 👪 Source Study
ATCC 29178 species Increases 👪 Source Study
ATCC 43138 species Increases 👪 Source Study
ATCC 49124 species Increases 👪 Source Study
ATCC 49372 species Increases 👪 Source Study
ATCC 49427 species Increases 👪 Source Study
ATCC 51266 species Increases 👪 Source Study
ATCC 51725 species Increases 👪 Source Study
ATCC 700779 species Increases 👪 Source Study
ATCC BAA-102 species Increases 👪 Source Study
ATCC BAA-1240 species Increases 👪 Source Study
ATCC BAA-257 species Increases 👪 Source Study
ATCC BAA-350 species Increases 👪 Source Study
ATCC BAA-960 species Increases 👪 Source Study
CCM 7280 species Increases 👪 Source Study
CCM 7299 species Increases 👪 Source Study
CCM 7990 species Increases 👪 Source Study
CCTCC AB 2012022 species Increases 👪 Source Study
CCTCC AB 207151 species Increases 👪 Source Study
CCUG 46149 species Increases 👪 Source Study
CCUG 48363 species Increases 👪 Source Study
CCUG 51504 species Increases 👪 Source Study
CCUG 51516 species Increases 👪 Source Study
CCUG 53116 species Increases 👪 Source Study
CCUG 55896 species Increases 👪 Source Study
CCUG 58201 species Increases 👪 Source Study
CCUG 59304 species Increases 👪 Source Study
CCUG 63249 species Increases 👪 Source Study
CECT 7670 species Increases 👪 Source Study
CECT 7985 species Increases 👪 Source Study
CECT 8338 species Increases 👪 Source Study
CFBP 11706 species Increases 👪 Source Study
CGMCC 1.15531 species Increases 👪 Source Study
CGMCC 1.15532 species Increases 👪 Source Study
CGMCC 1.15533 species Increases 👪 Source Study
CGMCC 1.15534 species Increases 👪 Source Study
CGMCC 1.15667 species Increases 👪 Source Study
CGMCC 1.15942 species Increases 👪 Source Study
CIP 109839 species Increases 👪 Source Study
CSUR P1224 species Increases 👪 Source Study
DSM 101070 species Increases 👪 Source Study
DSM 104980 species Increases 👪 Source Study
DSM 16611 species Increases 👪 Source Study
DSM 17875 species Increases 👪 Source Study
DSM 18963 species Increases 👪 Source Study
DSM 26920 species Increases 👪 Source Study
DSM 28040 species Increases 👪 Source Study
DSM 28043 species Increases 👪 Source Study
DSM 6978 species Increases 👪 Source Study
Enterococcus alcedinis species Increases 👪 Source Study
Enterococcus asini species Increases 👪 Source Study
Enterococcus canis species Increases 👪 Source Study
Enterococcus cecorum species Increases 👪 Source Study
Enterococcus columbae species Increases 👪 Source Study
enterococcus durans species Increases 👪 Source Study
Enterococcus gallinarum species Increases 👪 Source Study
Enterococcus haemoperoxidus species Increases 👪 Source Study
Enterococcus hermanniensis species Increases 👪 Source Study
Enterococcus italicus species Increases 👪 Source Study
Enterococcus malodoratus species Increases 👪 Source Study
Enterococcus sp. species Increases 👪 Source Study
Enterococcus sp. FDAARGOS_375 species Increases 👪 Source Study
Enterococcus sp. HSIEG1 species Increases 👪 Source Study
Enterococcus sulfureus species Increases 👪 Source Study
fluorescent pseudomonads species Increases 👪 Source Study
JCM 14963 species Increases 👪 Source Study
JCM 8722 species Increases 👪 Source Study
KCTC 32246 species Increases 👪 Source Study
KCTC 32541 species Increases 👪 Source Study
PCU:282 species Increases 👪 Source Study
Pseudomonas denitrificans ATCC 13867 species Increases 👪 Source Study
Pseudomonas gingeri species Increases 👪 Source Study
Pseudomonas oryzae species Increases 👪 Source Study
Pseudomonas parafulva species Increases 👪 Source Study
Pseudomonas putida group species Increases 👪 Source Study
Pseudomonas saponiphila species Increases 👪 Source Study
Pseudomonas sp. 02C 26 species Increases 👪 Source Study
Pseudomonas sp. 31-12 species Increases 👪 Source Study
Pseudomonas sp. 7SR1 species Increases 👪 Source Study
Pseudomonas sp. a101-18-2 species Increases 👪 Source Study
Pseudomonas sp. a111-5 species Increases 👪 Source Study
Pseudomonas sp. ACM7 species Increases 👪 Source Study
Pseudomonas sp. CC6-YY-74 species Increases 👪 Source Study
Pseudomonas sp. CMR12a species Increases 👪 Source Study
Pseudomonas sp. CMR5c species Increases 👪 Source Study
Pseudomonas sp. DQ-01 species Increases 👪 Source Study
Pseudomonas sp. DTU12.3 species Increases 👪 Source Study
Pseudomonas sp. DY-1 species Increases 👪 Source Study
Pseudomonas sp. G1116 species Increases 👪 Source Study
Pseudomonas sp. GmFRB023 species Increases 👪 Source Study
Pseudomonas sp. KB23 species Increases 👪 Source Study
Pseudomonas sp. KVS86 species Increases 👪 Source Study
Pseudomonas sp. LH1G9 species Increases 👪 Source Study
Pseudomonas sp. LPH1 species Increases 👪 Source Study
Pseudomonas sp. LTJR-52 species Increases 👪 Source Study
Pseudomonas sp. MFY143 species Increases 👪 Source Study
Pseudomonas sp. MRSN12121 species Increases 👪 Source Study
Pseudomonas sp. MT-1 species Increases 👪 Source Study
Pseudomonas sp. NS1(2017) species Increases 👪 Source Study
Pseudomonas sp. PcFRB072 species Increases 👪 Source Study
Pseudomonas sp. PcFRB119 species Increases 👪 Source Study
Pseudomonas sp. PONIH3 species Increases 👪 Source Study
Pseudomonas sp. ps4-2 species Increases 👪 Source Study
Pseudomonas sp. QZS01 species Increases 👪 Source Study
Pseudomonas sp. R4-34-07 species Increases 👪 Source Study
Pseudomonas sp. R5-89-07 species Increases 👪 Source Study
Pseudomonas sp. RU47 species Increases 👪 Source Study
Pseudomonas sp. S-6-2 species Increases 👪 Source Study
Pseudomonas sp. StFLB209 species Increases 👪 Source Study
Pseudomonas sp. SWI36 species Increases 👪 Source Study
Pseudomonas sp. TCU-HL1 species Increases 👪 Source Study
Pseudomonas sp. TMW 2.1634 species Increases 👪 Source Study
Pseudomonas sp. URMO17WK12:I11 species Increases 👪 Source Study
Pseudomonas sp. WCS374 species Increases 👪 Source Study
Pseudomonas stutzeri group species Increases 👪 Source Study
Pseudomonas syringae group species Increases 👪 Source Study
Streptococcus anginosus group species Increases 👪 Source Study
Streptococcus bovis species Increases 👪 Source Study
Streptococcus canis species Increases 👪 Source Study
Streptococcus cristatus species Increases 👪 Source Study
Streptococcus danieliae species Increases 👪 Source Study
Streptococcus dentapri species Increases 👪 Source Study
Streptococcus dentasini species Increases 👪 Source Study
Streptococcus didelphis species Increases 👪 Source Study
Streptococcus entericus species Increases 👪 Source Study
Streptococcus G418 species Increases 👪 Source Study
Streptococcus hyointestinalis species Increases 👪 Source Study
Streptococcus hyovaginalis species Increases 👪 Source Study
Streptococcus marimammalium species Increases 👪 Source Study
Streptococcus massiliensis species Increases 👪 Source Study
Streptococcus merionis species Increases 👪 Source Study
Streptococcus milleri species Increases 👪 Source Study
Streptococcus mitis species Increases 👪 Source Study
Streptococcus oralis species Increases 👪 Source Study
Streptococcus orisasini species Increases 👪 Source Study
Streptococcus orisratti species Increases 👪 Source Study
Streptococcus parauberis species Increases 👪 Source Study
Streptococcus pharyngis species Increases 👪 Source Study
Streptococcus phocae species Increases 👪 Source Study
Streptococcus pluranimalium species Increases 👪 Source Study
Streptococcus plurextorum species Increases 👪 Source Study
Streptococcus porcorum species Increases 👪 Source Study
Streptococcus pseudoporcinus species Increases 👪 Source Study
Streptococcus rupicaprae species Increases 👪 Source Study
Streptococcus sanguinis species Increases 👪 Source Study
Streptococcus seminale species Increases 👪 Source Study
Streptococcus sobrinus species Increases 👪 Source Study
Streptococcus sp. 2_1_36FAA species Increases 👪 Source Study
Streptococcus sp. 2011_Ileo_MS_A12 species Increases 👪 Source Study
Streptococcus sp. 2011_Ileo_MS_C3 species Increases 👪 Source Study
Streptococcus sp. 2011_Oral_MS_B3 species Increases 👪 Source Study
Streptococcus sp. 2011_Oral_MS_D12 species Increases 👪 Source Study
Streptococcus sp. 2011_Oral_MS_E1 species Increases 👪 Source Study
Streptococcus sp. A12 species Increases 👪 Source Study
Streptococcus sp. AS14 species Increases 👪 Source Study
Streptococcus sp. BS35b species Increases 👪 Source Study
Streptococcus sp. canine oral taxon 279 species Increases 👪 Source Study
Streptococcus sp. F0441 species Increases 👪 Source Study
Streptococcus sp. F0442 species Increases 👪 Source Study
Streptococcus sp. FDAARGOS_192 species Increases 👪 Source Study
Streptococcus sp. HPA1 species Increases 👪 Source Study
Streptococcus sp. HPH0090 species Increases 👪 Source Study
Streptococcus sp. HSISB1 species Increases 👪 Source Study
Streptococcus sp. HSISM1 species Increases 👪 Source Study
Streptococcus sp. HSISS1 species Increases 👪 Source Study
Streptococcus sp. HSISS2 species Increases 👪 Source Study
Streptococcus sp. I-G2 species Increases 👪 Source Study
Streptococcus sp. JS71 species Increases 👪 Source Study
Streptococcus sp. M143 species Increases 👪 Source Study
Streptococcus sp. NPS 308 species Increases 👪 Source Study
Streptococcus sp. oral taxon 064 species Increases 👪 Source Study
Streptococcus sp. oral taxon 071 species Increases 👪 Source Study
Streptococcus sp. oral taxon 431 species Increases 👪 Source Study
Streptococcus sp. oral taxon G62 species Increases 👪 Source Study
Streptococcus sp. oral taxon G63 species Increases 👪 Source Study
Streptococcus sp. S16-08 species Increases 👪 Source Study
Streptococcus sp. TM013 species Increases 👪 Source Study
Streptococcus sp. Z15 species Increases 👪 Source Study
Streptococcus suis species Increases 👪 Source Study
Streptococcus troglodytae species Increases 👪 Source Study
Streptococcus troglodytidis species Increases 👪 Source Study
Streptococcus urinalis species Increases 👪 Source Study
Streptococcus viridans species Increases 👪 Source Study
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