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Citizen Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a symptom. There are many bacteria involved. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is based on associations discovered from annotated 16s microbiome samples. See this post for more information.

SymptomImpactPredictor of Bacteria Shift
Condition: ME/CFS with IBSWorsen2.8
DePaul University Fatigue Questionnaire : Abdomen painWorsen2.8
DePaul University Fatigue Questionnaire : AllergiesWorsen2.8
DePaul University Fatigue Questionnaire : Anxiety/tensionWorsen2.8
DePaul University Fatigue Questionnaire : DepressionWorsen2.8
DePaul University Fatigue Questionnaire : Difficulty finding the right wordWorsen2.8
DePaul University Fatigue Questionnaire : FatigueWorsen2.8
DePaul University Fatigue Questionnaire : Forgetting what you are trying to sayWorsen2.8
DePaul University Fatigue Questionnaire : Walking up early in the morning (e.g. 3AM)Worsen2.8
Immune Manifestations: DiarrheaImproves-1.52

Published Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a medical condition. There are many bacteria. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is according to the microbiome shifts reported in studies. Clinical studies may show different results

SymptomImpactPredictor of Bacteria Shift
AcneWorsen0
ADHDImproves-2.72
AllergiesImproves-3.11
Amyotrophic lateral sclerosis (ALS) Motor NeuronWorsen2.72
Ankylosing spondylitisWorsen0.98
AsthmaImproves-2.8
AtherosclerosisImproves-1.45
AutismWorsen3.53
Barrett esophagus cancerWorsen1.46
Bipolar DisorderWorsen0.73
Brain TraumaImproves-1.45
CarcinomaImproves-2.63
Celiac DiseaseImproves-2.48
Chronic Fatigue SyndromeImproves-3.96
Chronic Kidney DiseaseImproves-2.45
Colorectal CancerWorsen2.43
COVID-19Improves-2.43
Crohn's DiseaseWorsen3.05
cystic fibrosisImproves-3.57
DepressionImproves-2.53
EczemaImproves-3.47
EpilepsyImproves-2.72
FibromyalgiaImproves-2.72
Functional constipation / chronic idiopathic constipationImproves-2.63
gallstone disease (gsd)Worsen2.8
Gastroesophageal reflux disease (Gerd) including Barrett's esophagusImproves-1.46
Hashimoto's thyroiditisImproves-3.28
High Blood PressureImproves-2.45
Histamine IssuesImproves-2.79
Histamine Issues From UbiomeImproves-2.72
Hyperlipidemia (High Blood Fats)Improves-3.51
IgA nephropathy (IgAN)Improves-2.72
Inflammatory Bowel DiseaseImproves-2.88
Irritable Bowel SyndromeImproves-3.34
Liver CirrhosisImproves-2.19
ME/CFS with IBSWorsen0
ME/CFS without IBSImproves-2.43
Multiple SclerosisImproves-3.22
Multiple system atrophy (MSA)Worsen2.72
Nonalcoholic Fatty Liver Disease (nafld) NonalcoholicWorsen2.92
ObesityWorsen2.47
OsteoporosisWorsen2.72
Parkinson's DiseaseWorsen3.82
PsoriasisWorsen1.94
rheumatoid arthritis (RA),Spondyloarthritis (SpA)Improves-4.73
RosaceaImproves-2.72
SchizophreniaWorsen2.93
Small Intestinal Bacterial Overgrowth (SIBO)Improves-3.99
Stress / posttraumatic stress disorderImproves-3.42
Systemic Lupus ErythematosusImproves-3.77
Type 1 DiabetesImproves-3.08
Type 2 DiabetesImproves-2.98
Ulcerative colitisWorsen2.35

Bacteria Impacted

Suggest a missed study:

We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.

📓 - direct citation | 👪 - Impacts Parent Taxa | 👶 - Impacts Child Taxa | 🧙 - Inferred
Taxonomy Rank Effect Citations
Lactobacillaceae family Increases 📓 Source Study
Leuconostocaceae family Increases 📓 Source Study
Klebsiella genus Decreases 📓 Source Study
Pseudomonas genus Decreases 📓 Source Study
Salmonella genus Decreases 📓 Source Study
Staphylococcus genus Decreases 📓 Source Study
Pseudomonas chlororaphis group genus Decreases 👪 Source Study
Fructobacillus genus Increases 👪 Source Study
Leuconostoc genus Increases 👪 Source Study
Oenococcus genus Increases 👪 Source Study
Pediococcus genus Increases 👪 Source Study
Sharpea genus Increases 👪 Source Study
Weissella genus Increases 👪 Source Study
Lactobacillus genus Increases 📓 Source Study
Leuconostoc genus Increases 📓 Source Study
Pediococcus genus Increases 📓 Source Study
[Clostridium] leptum species Decreases 📓 Source Study
Bacteroides fragilis species Decreases 📓 Source Study
Pseudomonas aeruginosa species Decreases 📓 Source Study
Pseudomonas aeruginosa group species Decreases 📓 Source Study
Salmonella enterica species Decreases 📓 Source Study
[Clostridium] spiroforme species Decreases 👪 Source Study
Achromobacter georgiopolitanum species Decreases 👪 Source Study
ATCC 35538 species Decreases 👪 Source Study
ATCC 35539 species Decreases 👪 Source Study
ATCC 43808 species Decreases 👪 Source Study
ATCC 43809 species Decreases 👪 Source Study
ATCC 49168 species Decreases 👪 Source Study
ATCC 49171 species Decreases 👪 Source Study
ATCC 49910 species Decreases 👪 Source Study
ATCC 51365 species Decreases 👪 Source Study
ATCC 700337 species Decreases 👪 Source Study
ATCC 700373 species Decreases 👪 Source Study
CCM 7045 species Decreases 👪 Source Study
CCM 7213 species Decreases 👪 Source Study
CCUG 51270 species Decreases 👪 Source Study
CCUG 59809 species Decreases 👪 Source Study
CIP 110771 species Decreases 👪 Source Study
DSM 28299 species Decreases 👪 Source Study
DSM 28300 species Decreases 👪 Source Study
DSM 6978 species Decreases 👪 Source Study
fluorescent pseudomonads species Decreases 👪 Source Study
KCTC 32541 species Decreases 👪 Source Study
Klebsiella michiganensis species Decreases 👪 Source Study
Klebsiella sp. species Decreases 👪 Source Study
Klebsiella sp. B12 species Decreases 👪 Source Study
Klebsiella sp. FDAARGOS_511 species Decreases 👪 Source Study
Klebsiella sp. M5al species Decreases 👪 Source Study
Klebsiella sp. OBRC7 species Decreases 👪 Source Study
Klebsiella sp. SOR89 species Decreases 👪 Source Study
Klebsiella sp. WCHKl090001 species Decreases 👪 Source Study
Klebsiella variicola species Decreases 👪 Source Study
LTH 3734 species Decreases 👪 Source Study
Pseudomonas alcaligenes species Decreases 👪 Source Study
Pseudomonas arsenicoxydans species Decreases 👪 Source Study
Pseudomonas brassicacearum species Decreases 👪 Source Study
Pseudomonas citronellolis species Decreases 👪 Source Study
Pseudomonas denitrificans ATCC 13867 species Decreases 👪 Source Study
Pseudomonas entomophila species Decreases 👪 Source Study
Pseudomonas extremaustralis species Decreases 👪 Source Study
Pseudomonas frederiksbergensis species Decreases 👪 Source Study
Pseudomonas gingeri species Decreases 👪 Source Study
Pseudomonas graminis species Decreases 👪 Source Study
Pseudomonas granadensis species Decreases 👪 Source Study
Pseudomonas guangdongensis species Decreases 👪 Source Study
Pseudomonas koreensis species Decreases 👪 Source Study
Pseudomonas litoralis species Decreases 👪 Source Study
Pseudomonas mendocina species Decreases 👪 Source Study
Pseudomonas moraviensis species Decreases 👪 Source Study
Pseudomonas oryzae species Decreases 👪 Source Study
Pseudomonas parafulva species Decreases 👪 Source Study
Pseudomonas pohangensis species Decreases 👪 Source Study
Pseudomonas prosekii species Decreases 👪 Source Study
Pseudomonas psychrotolerans species Decreases 👪 Source Study
Pseudomonas putida group species Decreases 👪 Source Study
Pseudomonas reinekei species Decreases 👪 Source Study
Pseudomonas resinovorans species Decreases 👪 Source Study
Pseudomonas sabulinigri species Decreases 👪 Source Study
Pseudomonas salegens species Decreases 👪 Source Study
Pseudomonas saponiphila species Decreases 👪 Source Study
Pseudomonas saudiphocaensis species Decreases 👪 Source Study
Pseudomonas sihuiensis species Decreases 👪 Source Study
Pseudomonas soli species Decreases 👪 Source Study
Pseudomonas sp. 02C 26 species Decreases 👪 Source Study
Pseudomonas sp. 31-12 species Decreases 👪 Source Study
Pseudomonas sp. 7SR1 species Decreases 👪 Source Study
Pseudomonas sp. a101-18-2 species Decreases 👪 Source Study
Pseudomonas sp. a111-5 species Decreases 👪 Source Study
Pseudomonas sp. ACM7 species Decreases 👪 Source Study
Pseudomonas sp. CC6-YY-74 species Decreases 👪 Source Study
Pseudomonas sp. CMR12a species Decreases 👪 Source Study
Pseudomonas sp. CMR5c species Decreases 👪 Source Study
Pseudomonas sp. DQ-01 species Decreases 👪 Source Study
Pseudomonas sp. DTU12.3 species Decreases 👪 Source Study
Pseudomonas sp. DY-1 species Decreases 👪 Source Study
Pseudomonas sp. G1116 species Decreases 👪 Source Study
Pseudomonas sp. GmFRB023 species Decreases 👪 Source Study
Pseudomonas sp. KB23 species Decreases 👪 Source Study
Pseudomonas sp. KVS86 species Decreases 👪 Source Study
Pseudomonas sp. LH1G9 species Decreases 👪 Source Study
Pseudomonas sp. LPH1 species Decreases 👪 Source Study
Pseudomonas sp. LTJR-52 species Decreases 👪 Source Study
Pseudomonas sp. MFY143 species Decreases 👪 Source Study
Pseudomonas sp. MRSN12121 species Decreases 👪 Source Study
Pseudomonas sp. MT-1 species Decreases 👪 Source Study
Pseudomonas sp. NS1(2017) species Decreases 👪 Source Study
Pseudomonas sp. PcFRB072 species Decreases 👪 Source Study
Pseudomonas sp. PcFRB119 species Decreases 👪 Source Study
Pseudomonas sp. PONIH3 species Decreases 👪 Source Study
Pseudomonas sp. ps4-2 species Decreases 👪 Source Study
Pseudomonas sp. QZS01 species Decreases 👪 Source Study
Pseudomonas sp. R4-34-07 species Decreases 👪 Source Study
Pseudomonas sp. R5-89-07 species Decreases 👪 Source Study
Pseudomonas sp. RU47 species Decreases 👪 Source Study
Pseudomonas sp. S-6-2 species Decreases 👪 Source Study
Pseudomonas sp. StFLB209 species Decreases 👪 Source Study
Pseudomonas sp. SWI36 species Decreases 👪 Source Study
Pseudomonas sp. TCU-HL1 species Decreases 👪 Source Study
Pseudomonas sp. TMW 2.1634 species Decreases 👪 Source Study
Pseudomonas sp. URMO17WK12:I11 species Decreases 👪 Source Study
Pseudomonas sp. WCS374 species Decreases 👪 Source Study
Pseudomonas straminea species Decreases 👪 Source Study
Pseudomonas stutzeri group species Decreases 👪 Source Study
Pseudomonas syringae group species Decreases 👪 Source Study
Pseudomonas umsongensis species Decreases 👪 Source Study
Pseudomonas versuta species Decreases 👪 Source Study
Pseudomonas xinjiangensis species Decreases 👪 Source Study
Pseudomonas yamanorum species Decreases 👪 Source Study
Salmonella bongori species Decreases 👪 Source Study
Salmonella sp. 111 species Decreases 👪 Source Study
Staphylococcus auricularis species Decreases 👪 Source Study
Staphylococcus capitis species Decreases 👪 Source Study
Staphylococcus chromogenes species Decreases 👪 Source Study
Staphylococcus cohnii species Decreases 👪 Source Study
Staphylococcus devriesei species Decreases 👪 Source Study
Staphylococcus equorum species Decreases 👪 Source Study
Staphylococcus haemolyticus species Decreases 👪 Source Study
Staphylococcus pasteuri species Decreases 👪 Source Study
Staphylococcus piscifermentans species Decreases 👪 Source Study
Staphylococcus saprophyticus species Decreases 👪 Source Study
Staphylococcus sciuri species Decreases 👪 Source Study
Staphylococcus simulans species Decreases 👪 Source Study
Staphylococcus sp. 3035O2 species Decreases 👪 Source Study
Staphylococcus sp. 3356O2 species Decreases 👪 Source Study
Staphylococcus sp. FXY54 species Decreases 👪 Source Study
Staphylococcus sp. L10 species Decreases 👪 Source Study
Staphylococcus sp. M0911 species Decreases 👪 Source Study
Staphylococcus sp. SDB 2975 species Decreases 👪 Source Study
Staphylococcus sp. WB17-17 species Decreases 👪 Source Study
Staphylococcus sp. WB18-16 species Decreases 👪 Source Study
Staphylococcus stepanovicii species Decreases 👪 Source Study
Staphylococcus vitulinus species Decreases 👪 Source Study
Staphylococcus warneri species Decreases 👪 Source Study
Staphylococcus xylosus species Decreases 👪 Source Study
ATCC 12291 species Increases 👪 Source Study
ATCC 49902 species Increases 👪 Source Study
ATCC 700934 species Increases 👪 Source Study
ATCC 9135 species Increases 👪 Source Study
ATCC BAA-344 species Increases 👪 Source Study
BCRC 17755 species Increases 👪 Source Study
CCUG 48460 species Increases 👪 Source Study
CCUG 63301 species Increases 👪 Source Study
CCUG 63631 species Increases 👪 Source Study
CRBIP 24.179 species Increases 👪 Source Study
DSM 15101 species Increases 👪 Source Study
DSM 19284 species Increases 👪 Source Study
IMSNU 11154 species Increases 👪 Source Study
JCM 1039 species Increases 👪 Source Study
JCM 32269 species Increases 👪 Source Study
Lactobacillus acetotolerans species Increases 👪 Source Study
Lactobacillus acidipiscis species Increases 👪 Source Study
Lactobacillus agilis species Increases 👪 Source Study
Lactobacillus alimentarius species Increases 👪 Source Study
Lactobacillus allii species Increases 👪 Source Study
Lactobacillus amylolyticus species Increases 👪 Source Study
Lactobacillus animalis species Increases 👪 Source Study
Lactobacillus antri species Increases 👪 Source Study
Lactobacillus apis species Increases 👪 Source Study
Lactobacillus backii species Increases 👪 Source Study
Lactobacillus bifermentans species Increases 👪 Source Study
Lactobacillus bombi species Increases 👪 Source Study
Lactobacillus brantae species Increases 👪 Source Study
Lactobacillus buchneri species Increases 👪 Source Study
Lactobacillus ceti species Increases 👪 Source Study
Lactobacillus coleohominis species Increases 👪 Source Study
Lactobacillus composti species Increases 👪 Source Study
Lactobacillus coryniformis species Increases 👪 Source Study
Lactobacillus crustorum species Increases 👪 Source Study
Lactobacillus curieae species Increases 👪 Source Study
Lactobacillus equi species Increases 👪 Source Study
Lactobacillus equigenerosi species Increases 👪 Source Study
Lactobacillus farciminis species Increases 👪 Source Study
Lactobacillus fermentum species Increases 👪 Source Study
Lactobacillus floricola species Increases 👪 Source Study
Lactobacillus frumenti species Increases 👪 Source Study
Lactobacillus fuchuensis species Increases 👪 Source Study
Lactobacillus gallinarum species Increases 👪 Source Study
Lactobacillus ginsenosidimutans species Increases 👪 Source Study
Lactobacillus hamsteri species Increases 👪 Source Study
Lactobacillus harbinensis species Increases 👪 Source Study
Lactobacillus hayakitensis species Increases 👪 Source Study
Lactobacillus heilongjiangensis species Increases 👪 Source Study
Lactobacillus helveticus species Increases 👪 Source Study
Lactobacillus hilgardii species Increases 👪 Source Study
Lactobacillus hokkaidonensis species Increases 👪 Source Study
Lactobacillus ingluviei species Increases 👪 Source Study
Lactobacillus intestinalis species Increases 👪 Source Study
Lactobacillus jensenii species Increases 👪 Source Study
Lactobacillus johnsonii species Increases 👪 Source Study
Lactobacillus kalixensis species Increases 👪 Source Study
Lactobacillus kefiranofaciens species Increases 👪 Source Study
Lactobacillus kefiri species Increases 👪 Source Study
Lactobacillus kunkeei species Increases 👪 Source Study
Lactobacillus lindneri species Increases 👪 Source Study
Lactobacillus malefermentans species Increases 👪 Source Study
Lactobacillus mali species Increases 👪 Source Study
Lactobacillus mellifer species Increases 👪 Source Study
Lactobacillus mellis species Increases 👪 Source Study
Lactobacillus murinus species Increases 👪 Source Study
Lactobacillus namurensis species Increases 👪 Source Study
Lactobacillus nodensis species Increases 👪 Source Study
Lactobacillus oligofermentans species Increases 👪 Source Study
Lactobacillus oris species Increases 👪 Source Study
Lactobacillus oryzae species Increases 👪 Source Study
Lactobacillus ozensis species Increases 👪 Source Study
Lactobacillus pantheris species Increases 👪 Source Study
Lactobacillus parabuchneri species Increases 👪 Source Study
Lactobacillus paracollinoides species Increases 👪 Source Study
Lactobacillus parafarraginis species Increases 👪 Source Study
Lactobacillus paralimentarius species Increases 👪 Source Study
Lactobacillus paraplantarum species Increases 👪 Source Study
Lactobacillus pentosus species Increases 👪 Source Study
Lactobacillus perolens species Increases 👪 Source Study
Lactobacillus plajomi species Increases 👪 Source Study
Lactobacillus pontis species Increases 👪 Source Study
Lactobacillus psittaci species Increases 👪 Source Study
Lactobacillus rapi species Increases 👪 Source Study
Lactobacillus rodentium species Increases 👪 Source Study
Lactobacillus sakei species Increases 👪 Source Study
Lactobacillus saniviri species Increases 👪 Source Study
Lactobacillus satsumensis species Increases 👪 Source Study
Lactobacillus selangorensis species Increases 👪 Source Study
Lactobacillus songhuajiangensis species Increases 👪 Source Study
Lactobacillus sp. species Increases 👪 Source Study
Lactobacillus sp. 7_1_47FAA species Increases 👪 Source Study
Lactobacillus sp. Akhmro1 species Increases 👪 Source Study
Lactobacillus sp. BHWM-4 species Increases 👪 Source Study
Lactobacillus sp. C30An8 species Increases 👪 Source Study
Lactobacillus sp. C4I1 species Increases 👪 Source Study
Lactobacillus sp. C4I18 species Increases 👪 Source Study
Lactobacillus sp. CBA3606 species Increases 👪 Source Study
Lactobacillus sp. H7_2_4MCO2 species Increases 👪 Source Study
Lactobacillus sp. H7_6_6MCO2 species Increases 👪 Source Study
Lactobacillus sp. HBUAS52074 species Increases 👪 Source Study
Lactobacillus sp. HSLZ-75 species Increases 👪 Source Study
Lactobacillus sp. MYMRS/TEN2 species Increases 👪 Source Study
Lactobacillus sp. NRCT-KU 1 species Increases 👪 Source Study
Lactobacillus sp. S16 species Increases 👪 Source Study
Lactobacillus sp. T059 species Increases 👪 Source Study
Lactobacillus sp. TAB-22 species Increases 👪 Source Study
Lactobacillus sp. TAB-29 species Increases 👪 Source Study
Lactobacillus tucceti species Increases 👪 Source Study
Lactobacillus vaccinostercus species Increases 👪 Source Study
Lactobacillus vaginalis species Increases 👪 Source Study
Lactobacillus vini species Increases 👪 Source Study
Lactobacillus zymae species Increases 👪 Source Study
Leuconostoc carnosum species Increases 👪 Source Study
Leuconostoc citreum species Increases 👪 Source Study
Leuconostoc fallax species Increases 👪 Source Study
Leuconostoc gelidum species Increases 👪 Source Study
Leuconostoc lactis species Increases 👪 Source Study
Leuconostoc mesenteroides species Increases 👪 Source Study
Leuconostoc miyukkimchii species Increases 👪 Source Study
Leuconostoc sp. C7I4 species Increases 👪 Source Study
LMG:9496 species Increases 👪 Source Study
Pediococcus argentinicus species Increases 👪 Source Study
Pediococcus damnosus species Increases 👪 Source Study
Pediococcus parvulus species Increases 👪 Source Study
Pediococcus pentosaceus species Increases 👪 Source Study
Pediococcus siamensis species Increases 👪 Source Study
Pediococcus sp. 3107O2 species Increases 👪 Source Study
Pediococcus sp. MFC1 species Increases 👪 Source Study
Pediococcus sp. S18 species Increases 👪 Source Study
Escherichia coli O157:H7 strain Decreases 📓 Source Study

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