Toggle navigation
Microbiome Analysis for Patients:
Anonymous (Legacy User)
Home
Other Labs Analysis
Uploads
Explorers
Compute
Symptoms vs Bacteria
Compute
Symptoms vs End Products fom Bacteria
🔐 Symptoms vs Bacteria
Summary
🔐 Symptoms vs Bacteria End Product
Summary
Symptoms Cascade/Comorbid
Symptoms Summary *
Very Strong Symptom to Bacteria Associations
*
Symptoms-Bacteria Explorer *
Bacteria causing Symptoms *
Symptoms-Metabolism Explorer *
Look up...
🍳 Microbiome Modifiers
🍳 Bacteria
🍳 PubMed Medical Condition
🍳 Salicylates in Food
🍳 Antioxidants in Food
🍳 End Products
(deprecating)
🍳 Kegg End Products
(in progress)
🔐 Biological Module(KEGG)
🔐 Enzymes
🔐 Modifiers for Specific Conditions
Commercial Probiotics
Sources for Single Strain Probiotics
Symptoms Reported
Citizen Science 2.0 on Symptoms
Flavonoids
Foods with Flavonoids
Distributions seen in Data
Mapping of Microba Bacteria
Reference
Bacteria Reported by different 16s providers
Microbiome Consultants
Data Summary
Nat.Lib.Medicine
PubMed Reports
Adjust Condition's Microbiome A Priori
... About
Contact
Services Offered
About Downloads
Release Notes
Partner's Pages
Logon
About Donations
Link:
Comment:
Show Linked page on hover
This site requires Javascript to be enabled on many pages
Bacteria reported by various 16s providers
Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.
Critical Reading to understand the differences
The Taxonomy Nightmare
class
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Acidimicrobiia
5
136
39
Acidithiobacillia
23
1
Acidobacteriia
853
234
5
54
Actinobacteria
231
117
17
89
Alphaproteobacteria
484
407
14
256
Anaerolineae
12
80
113
Aquificae
4
Archaeoglobea
1
Ardenticatenia
9
1
Armatimonadia
1
Babeliae
2
Bacilli
854
444
39
269
Bacteroidia
856
424
19
268
Balneolia
246
7
Betaproteobacteria
811
33
19
271
Blastocatellia
2
67
2
Brocadiae
4
Caldilineae
1
118
3
Caldisericia
1
2
candidate division Termite Group 3
2
Chitinispirillia
7
Chitinophagia
7
341
5
Chlamydiia
59
28
Chlorobia
1
35
219
Chloroflexi
3
36
14
Chthonomonadetes
31
3
Clostridia
857
444
39
270
Coriobacteriia
843
443
34
9
Cytophagia
10
374
13
4
Deferribacteres
1
1
1
Dehalococcoidia
1
91
44
Deinococci
11
100
12
179
Deltaproteobacteria
689
427
31
262
Dictyoglomi
33
Elusimicrobia
7
49
20
3
Endomicrobia
1
Epsilonproteobacteria
299
223
10
145
Erysipelotrichia
837
444
39
267
Fibrobacteres
206
89
30
Fimbriimonadia
17
1
Flavobacteriia
506
271
13
227
Fusobacteriia
170
245
7
138
Gammaproteobacteria
786
424
19
274
Gloeobacteria
7
1
Halobacteria
1
Holophagae
207
107
Ignavibacteria
2
301
16
22
Ktedonobacteria
6
18
Lentisphaeria
303
152
8
2
Limnochordia
2
1
Malasseziomycetes
2
Methanomicrobia
20
2
2
Methylacidiphilae
5
Mollicutes
182
376
26
256
Negativicutes
858
444
37
12
Nitriliruptoria
21
123
Nitrososphaeria
1
Nitrospinia
2
Nitrospira
2
24
42
Oligoflexia
1
4
Oligosphaeria
1
15
Opitutae
108
198
1
168
Pedosphaera
1
Pentapetalae
21
Phycisphaerae
2
4
Planctomycetia
3
44
8
Rhodothermia
4
Rubrobacteria
2
42
5
Saprospiria
78
4
Solibacteres
1
7
Spartobacteria
26
8
Sphingobacteriia
22
285
28
261
Spirochaetia
28
69
7
Synergistia
251
174
1
191
Thermodesulfobacteria
34
Thermoleophilia
2
43
7
Thermolithobacteria
23
Thermomicrobia
1
2
1
Thermoplasmata
21
19
Thermoprotei
5
Thermotogae
4
Tissierellia
327
425
17
264
unclassified alpha proteobacteria
2
unclassified epsilon proteobacteria
2
Verrucomicrobiae
523
387
28
230
family
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Zetaproteobacteria
1
13
1
Acanthopleuribacteraceae
22
Acaryochloridaceae
2
Acetobacteraceae
7
128
1
87
Acholeplasmataceae
18
285
11
245
Acidaminococcaceae
600
398
23
10
Acidiferrobacteraceae
7
4
Acidimicrobiaceae
137
40
Acidithiobacillaceae
23
1
Acidobacteriaceae
99
75
44
Acidothermaceae
23
1
Actinomycetaceae
693
397
26
219
Actinopolysporaceae
65
67
Aerococcaceae
94
348
123
Aeromonadaceae
11
113
2
73
Akkermansiaceae
282
377
28
8
Alcaligenaceae
12
86
10
260
Alcanivoracaceae
13
35
Algiphilaceae
16
Alicyclobacillaceae
160
8
5
Alteromonadaceae
221
65
Amoebophilaceae
223
Anaerolineaceae
10
79
38
Anaeromyxobacteraceae
262
2
Anaeroplasmataceae
129
172
3
23
anamorphic Mycosphaerellaceae
1
Anaplasmataceae
19
83
Aphanizomenonaceae
1
4
Aphanothecaceae
2
1
Apiaceae
1
Aquificaceae
4
6
Archaeoglobaceae
1
Archangiaceae
32
6
Ardenticatenaceae
9
1
Armatimonadaceae
1
Atopobiaceae
120
278
12
5
Aurantimonadaceae
1
1
3
Babeliaceae
3
Bacillaceae
256
343
34
244
Bacillales Family X. Incertae Sedis
1
218
256
Bacteriovoracaceae
2
14
2
Bacteroidaceae
838
442
38
269
Balneolaceae
249
1
22
bandicoots
1
Barnesiellaceae
305
22
Bartonellaceae
2
15
Bdellovibrionaceae
1
4
Beijerinckiaceae
1
6
12
Bernardetiaceae
51
1
Beutenbergiaceae
1
1
Bifidobacteriaceae
672
437
28
263
Blastocatellaceae
2
Blattabacteriaceae
4
Bogoriellaceae
17
4
Borreliaceae
2
10
Brachyspiraceae
14
19
Bradymonadaceae
1
Bradyrhizobiaceae
17
28
19
Brevibacteriaceae
70
49
25
Brevinemataceae
2
Brucellaceae
29
23
4
25
Budviciaceae
144
4
Burkholderiaceae
42
127
15
153
Caedimonadaceae
1
Calanidae
1
Caldicoprobacteraceae
253
7
Caldilineaceae
1
121
96
Caldisericaceae
1
1
Calditrichaceae
63
Campylobacteraceae
298
184
4
108
Candidatus Brocadiaceae
5
Candidatus Desulfofervidaceae
1
Candidatus Midichloriaceae
1
1
Candidatus Nanopelagicaceae
3
Candidatus Paracaedibacteraceae
1
Cardiobacteriaceae
10
77
7
Carnobacteriaceae
369
225
5
124
Catabacteriaceae
107
78
1
Catalimonadaceae
29
Catenulisporaceae
1
4
Caulobacteraceae
17
50
115
Celerinatantimonadaceae
6
Cellulomonadaceae
31
19
Cellvibrionaceae
33
4
Centrarchidae
1
Chamaesiphonaceae
4
3
Chelatococcaceae
1
1
Chelidae
1
Chitinispirillaceae
7
Chitinivibrionaceae
2
Chitinophagaceae
9
340
137
Chlamydiaceae
1
2
Chlorobiaceae
36
220
Chloroflexaceae
2
1
Chlorogloeopsidaceae
6
Chordaceae
1
Christensenellaceae
138
66
25
24
Chromatiaceae
5
248
1
224
Chromobacteriaceae
53
4
Chroococcaceae
102
Chroococcidiopsidaceae
2
1
Chrysiogenaceae
13
67
Chthoniobacteraceae
4
8
Chthonomonadaceae
32
3
Cichlidae
1
Clostridiaceae
842
442
39
284
Clostridiales Family XI. Incertae Sedis
232
Clostridiales Family XII. Incertae Sedis
18
247
Clostridiales Family XIII. Incertae Sedis
708
410
33
7
Clostridiales Family XVI. Incertae Sedis
11
154
Clostridiales Family XVII. Incertae Sedis
34
17
Clostridiales incertae sedis
747
3
Cochlospermaceae
1
Cohaesibacteraceae
1
1
Coleofasciculaceae
4
Colwelliaceae
92
4
Comamonadaceae
130
81
2
230
Competibacteraceae
77
Conexibacteraceae
1
6
2
Corbulidae
1
Coriobacteriaceae
829
394
36
281
Corynebacteriaceae
498
267
7
149
Coxiellaceae
2
25
10
Criblamydiaceae
23
Crocinitomicaceae
20
3
1
crown conchs
1
Cryomorphaceae
1
53
1
Cyanobacteriaceae
22
38
Cyanothecaceae
1
Cyclobacteriaceae
123
4
Cytophagaceae
6
314
4
240
Dacrymycetaceae
1
Deferribacteraceae
1
52
85
Defluviitaleaceae
20
107
3
Dehalococcoidaceae
19
41
Deinococcaceae
10
56
133
Demequinaceae
24
Dermabacteraceae
70
38
45
Dermacoccaceae
7
12
3
Dermatophilaceae
1
4
1
Dermocarpellaceae
1
Desulfarculaceae
112
1
Desulfobacteraceae
2
264
2
68
Desulfobulbaceae
49
1
2
Desulfohalobiaceae
24
81
Desulfomicrobiaceae
113
19
Desulfonatronaceae
23
80
Desulfovibrionaceae
687
405
34
255
Desulfurellaceae
4
2
Desulfurobacteriaceae
5
1
Desulfuromonadaceae
51
138
Dictyoglomaceae
33
1
Dientamoebidae Grasse, 1953
1
Dietziaceae
4
59
18
Dunaliellaceae
1
Dysgonamonadaceae
24
4
Ectothiorhodospiraceae
1
100
193
Eggerthellaceae
461
430
38
12
Egibacteraceae
1
Egicoccaceae
1
Elusimicrobiaceae
7
29
6
Emplectonematidae
1
Endomicrobiaceae
1
Endozoicomonadaceae
1
Enterobacteriaceae
641
288
18
270
Enterococcaceae
158
119
30
254
Entomoplasmataceae
32
122
Eremolepidaceae
1
Erwiniaceae
126
126
4
4
Erysipelotrichaceae
837
432
24
284
Erythrobacteraceae
3
14
34
Eubacteriaceae
324
442
39
264
Euzebyaceae
16
123
Ferrimonadaceae
26
2
Ferrovaceae Johnson et al. 2014
1
Fervidobacteriaceae
4
Fibrobacteraceae
155
88
31
Fimbriimonadaceae
17
2
Flammeovirgaceae
1
176
72
Flavobacteriaceae
502
242
3
228
Fortieaceae
4
Francisellaceae
31
15
Frankiaceae
3
4
Fusobacteriaceae
141
211
8
119
Gaiellaceae
2
23
Gallionellaceae
16
28
Geminicoccaceae
2
Gemmataceae
1
6
5
Gemmatimonadaceae
1
16
3
Geobacteraceae
23
20
Geodermatophilaceae
3
60
6
Glareolidae
1
Gloeobacteraceae
7
1
Glycomycetaceae
66
23
Gnetaceae
1
Gomontiellaceae
45
1
Gomphosphaeriaceae
8
Gordoniaceae
4
38
7
Gottschalkiaceae
4
Gracilibacteraceae
8
213
4
Granulosicoccaceae
36
1
Haematopodidae
1
Hafniaceae
6
27
1
Hahellaceae
86
30
Halanaerobiaceae
1
92
48
Halieaceae
1
39
1
Haliscomenobacteraceae
46
3
Halobacteriaceae
1
Halobacteriovoraceae
22
4
Halobacteroidaceae
153
18
Halomonadaceae
1
234
2
100
Haloplasmataceae
1
9
Halothiobacillaceae
36
3
Hapalosiphonaceae
1
Helicobacteraceae
4
15
91
Heliobacteriaceae
84
4
120
Herpetosiphonaceae
3
Heteroleibleiniaceae
6
Holophagaceae
197
107
Holosporaceae
3
Hungateiclostridiaceae
4
Hydrogenophilaceae
5
94
36
Hydrogenothermaceae
8
1
Hyellaceae
1
Hymenobacteraceae
2
75
4
Hyphomicrobiaceae
4
54
130
Hyphomonadaceae
1
246
26
Iamiaceae
3
11
Ichthyobacteriaceae
1
Idiomarinaceae
18
17
Ignavibacteriaceae
1
23
19
Immundisolibacteraceae
3
Intrasporangiaceae
3
27
10
Isosphaeraceae
2
5
6
Jiangellaceae
3
4
Jonesiaceae
35
2
Kallotenuaceae
9
Kangiellaceae
23
1
Kiloniellaceae
25
3
64
Kineosporiaceae
1
23
8
Kofleriaceae
1
16
23
Kordiimonadaceae
58
Kosmotogaceae
1
1
Labilitrichaceae
27
Lachnospiraceae
853
442
39
288
Lactobacillaceae
827
434
26
250
Lanariaceae
1
Legionellaceae
1
23
169
Lentisphaeraceae
3
Leptolyngbyaceae
1
2
4
Leptospiraceae
16
96
Leptotrichiaceae
53
78
41
Leuconostocaceae
114
407
10
209
Lewinellaceae
7
Limnochordaceae
2
1
Listeriaceae
1
128
178
Litoricolaceae
21
6
Magnetococcaceae
8
1
Malasseziaceae
2
Marinifilaceae
115
3
Marinilabiliaceae
1
252
8
1
Mariprofundaceae
1
13
1
Melioribacteraceae
299
16
4
Merismopediaceae
3
Mesoaciditogaceae
2
Methanobacteriaceae
231
115
5
89
Methanocorpusculaceae
1
1
2
Methanomassiliicoccaceae
21
19
Methanoregulaceae
1
Methanosarcinaceae
1
Methylacidiphilaceae
6
Methylobacteriaceae
9
33
23
Methylococcaceae
1
87
6
Methylocystaceae
1
9
7
Methylophilaceae
121
115
Methylothermaceae
20
Microbacteriaceae
67
239
99
Microbulbiferaceae
4
Micrococcaceae
179
210
10
107
Microcoleaceae
130
13
Microcystaceae
4
Micromonosporaceae
2
99
81
Micropepsaceae
10
Microscillaceae
50
1
Microthrixaceae
1
mitosporic Venturiaceae
1
moles, shrew-moles, and desmans
1
Mooreiaceae
2
Moraxellaceae
40
209
2
143
Morganellaceae
11
219
4
Moritellaceae
1
1
Muribaculaceae
4
Mycobacteriaceae
75
42
62
Mycoplasmataceae
17
290
6
215
Myxococcaceae
2
4
Mzabimycetaceae
63
Nakamurellaceae
2
4
Nannocystaceae
11
12
Natranaerobiaceae
14
1
Nautiliaceae
12
2
Neisseriaceae
89
82
77
nightshade family
13
Nitriliruptoraceae
5
Nitrosomonadaceae
8
150
5
5
Nitrosopumilaceae
1
Nitrososphaeraceae
1
1
Nitrospinaceae
2
Nitrospiraceae
2
25
42
Nocardiaceae
24
5
35
Nocardioidaceae
4
173
44
Nocardiopsaceae
143
4
Nostocaceae
1
2
222
Oceanospirillaceae
125
64
Odoribacteraceae
360
418
35
247
Oleiphilaceae
3
Oligosphaeraceae
15
Opitutaceae
1
27
5
Orbaceae
3
4
Oscillatoriaceae
49
131
Oscillospiraceae
794
441
38
12
Oxalobacteraceae
281
216
26
165
Paenibacillaceae
3
379
32
212
Paludibacteraceae
1
4
Parachlamydiaceae
2
2
Paridae
1
Parvularculaceae
5
1
Pasteurellaceae
595
374
20
217
Pasteuriaceae
11
Patulibacteraceae
2
1
Pectobacteriaceae
1
194
1
4
Pelagibacteraceae
4
1
Peptococcaceae
559
410
26
264
Peptoniphilaceae
322
413
9
7
Peptostreptococcaceae
849
441
33
263
Persicobacteraceae
43
4
Petrotogaceae
4
Phycisphaeraceae
2
1
Phyllobacteriaceae
40
16
9
Piscirickettsiaceae
2
135
43
Planctomycetaceae
2
39
4
Planoceridae
1
Planococcaceae
42
367
18
118
Pleuronectidae
1
Polyangiaceae
1
2
19
Porphyromonadaceae
573
440
38
267
Porticoccaceae
1
Prevotellaceae
627
441
24
263
Prochloraceae
2
4
Prochlorococcaceae
1
Prochlorotrichaceae
3
Prolixibacteraceae
64
1
Promicromonosporaceae
18
8
Propionibacteriaceae
143
169
15
23
Prorhynchidae
1
Proteinivoraceae
207
Pseudanabaenaceae
1
85
Pseudoalteromonadaceae
24
13
Pseudomonadaceae
71
183
4
63
Pseudonocardiaceae
1
120
95
Psychromonadaceae
18
7
Puniceicoccaceae
7
193
165
Rarobacteraceae
35
Rhabdochlamydiaceae
27
Rhizobiaceae
18
49
11
73
Rhodanobacteraceae
1
89
4
Rhodobacteraceae
11
116
4
64
Rhodobiaceae
3
4
4
Rhodocyclaceae
76
190
167
Rhodospirillaceae
404
343
26
212
Rhodothalassiaceae
11
Rhodothermaceae
72
6
237
Rickettsiaceae
113
155
Rikenellaceae
779
438
38
39
Rivulariaceae
41
134
Roseiarcaceae
3
Roseiflexaceae
1
9
1
Rubricoccaceae
3
Rubritaleaceae
80
Rubrobacteraceae
1
23
5
Ruminococcaceae
842
442
39
287
Saccharospirillaceae
170
7
Salinibacteraceae
1
Salinisphaeraceae
11
1
Salinivirgaceae
1
Sandaracinaceae
5
1
Sanguibacteraceae
2
1
Saprospiraceae
26
22
Schleiferiaceae
8
Scytonemataceae
1
4
Sedimentisphaeraceae
3
Segniliparaceae
16
1
Selenomonadaceae
64
246
14
5
Shewanellaceae
69
167
Simkaniaceae
6
1
Simmondsiaceae
1
Sinobacteraceae
3
58
193
Sneathiellaceae
4
Solibacteraceae
1
1
Solirubrobacteraceae
1
10
5
Sphaerobacteraceae
6
Sphingobacteriaceae
8
285
26
263
Sphingomonadaceae
29
245
63
Spirillaceae
14
Spirochaetaceae
1
43
72
Spiroplasmataceae
173
4
Spirulinaceae
4
Spongiibacteraceae
100
1
Sporichthyaceae
7
1
Sporolactobacillaceae
66
62
Sporomusaceae
23
279
4
Staphylococcaceae
234
136
3
210
Sterolibacteriaceae
12
4
Streptococcaceae
842
440
39
267
Streptomycetaceae
88
2
63
Streptosporangiaceae
72
104
Succinivibrionaceae
16
125
66
Sulfolobaceae
5
Sutterellaceae
758
438
39
9
Symbiobacteriaceae
115
162
Synechococcaceae
6
85
Synergistaceae
251
175
1
193
Syntrophaceae
33
48
Syntrophobacteraceae
172
111
Syntrophomonadaceae
12
203
209
Syntrophorhabdaceae
1
16
Tannerellaceae
431
10
Taphrinaceae
1
Temperatibacteraceae
1
Thermaceae
1
29
123
Thermoactinomycetaceae
1
215
143
Thermoanaerobacteraceae
229
140
228
Thermoanaerobacterales Family III. Incertae Sedis
76
1
251
Thermoanaerobacterales Family IV. Incertae Sedis
9
Thermodesulfobacteriaceae
13
34
Thermodesulfobiaceae
15
28
6
4
Thermogemmatisporaceae
5
18
Thermoleophilaceae
19
Thermolithobacteraceae
23
Thermomicrobiaceae
1
Thermomonosporaceae
38
73
Thermonemataceae
13
Thermosporotrichaceae
2
Thermotogaceae
1
25
Thioalkalispiraceae
1
33
3
Thiobacillaceae
5
1
Thiotrichaceae
1
48
173
Thorselliaceae
35
Tissierellaceae
1
42
1
Trueperaceae
1
11
Tsukamurellaceae
1
2
27
unclassified Enterobacterales
3
Veillonellaceae
810
436
32
271
Verrucomicrobia subdivision 3
4
1
Verrucomicrobiaceae
241
76
223
Vesicomyidae
1
Vibrionaceae
1
57
21
Vicinamibacteraceae
1
Victivallaceae
303
152
8
4
Waddliaceae
1
Wenzhouxiangellaceae
18
1
Woeseiaceae
1
Xanthobacteraceae
2
8
7
Xanthomonadaceae
35
150
215
Yersiniaceae
22
78
5
4
genus
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Zoogloeaceae
2
4
16SrXII (Stolbur group)
3
Abiotrophia
19
42
14
Absiella
3
Acanthopleuribacter
22
Acaryochloris
2
Acetanaerobacterium
131
227
1
Acetatifactor
2
405
1
Acetitomaculum
148
311
1
Acetivibrio
34
363
27
Acetoanaerobium
246
1
Acetobacter
11
3
Acetobacterium
187
258
Acetobacteroides
132
Acetohalobium
1
14
Acetomicrobium
17
2
Acetonema
102
Acholeplasma
7
284
1
191
Achromatium
2
Achromobacter
1
9
23
Acidaminobacter
124
71
Acidaminococcus
109
224
4
196
Acidibacter
23
Acidicaldus
1
Acidicapsa
34
Acidiferrobacter
4
3
Acidihalobacter
1
Acidimicrobium
37
Acidiphilium
1
10
Acidipropionibacterium
1
4
Acidisphaera
1
Aciditerrimonas
51
Acidithiobacillus
23
1
Acidobacterium
4
Acidocella
1
Acidothermus
23
Acidovorax
8
15
18
Acinetobacter
33
111
1
54
Acizzia
1
Acrocarpospora
3
Actimicrobium
2
Actinoallomurus
1
Actinoalloteichus
4
Actinobacillus
105
98
3
157
Actinobaculum
20
5
26
Actinocatenispora
42
66
Actinocorallia
4
1
Actinokineospora
1
Actinomadura
18
17
Actinomyces
82
353
10
254
Actinomycetospora
2
Actinoplanes
51
10
Actinopolymorpha
19
Actinopolyspora
62
68
Actinosynnema
1
Actinotignum
20
41
Adhaeribacter
11
Adlercreutzia
568
3
202
Advenella
6
3
Aequorivita
7
2
2
Aeribacillus
24
1
Aeriscardovia
72
Aerococcus
19
93
12
Aeromicrobium
2
3
4
Aeromonas
11
78
2
4
Aerosphaera
52
Aestuariispira
187
2
Afipia
1
3
Agaribacter
151
Agarilytica
1
Agarivorans
3
1
Agathiphaga
1
Agathobacter
1
Agathobaculum
4
Aggregatibacter
191
71
85
Agmenellum
1
Agreia
1
Agrobacterium
1
11
Agrococcus
3
1
7
Agromyces
30
53
Ahniella
1
Akkermansia
518
379
28
239
Albidovulum
4
Albimonas
2
Alcaligenes
2
6
3
Alcalilimnicola
1
Alcanivorax
5
35
Algibacter
3
1
Algicola
22
Algimonas
5
Algiphilus
16
Algivirga
1
Algorimarina
1
Algoriphagus
51
3
Alicycliphilus
1
1
4
Alicyclobacillus
46
4
4
Aliiarcobacter
1
Aliidiomarina
12
Aliifodinibius
98
Aliihoeflea
1
Aliivibrio
1
Alishewanella
32
42
Alistipes
779
431
23
22
Alkalibacillus
2
20
Alkalibacter
43
Alkalibacterium
5
1
101
Alkalibaculum
91
Alkaliflexus
19
1
Alkalimarinus
6
Alkaliphilus
146
4
259
Alkalispirillum
1
Alkalitalea
1
Alkanibacter
1
Alkanindiges
1
3
Allisonella
77
73
3
Alloactinosynnema
4
Allobaculum
9
57
25
Allocatelliglobosispora
1
Allochromatium
15
Allofrancisella
4
1
Allofustis
2
4
Alloiococcus
3
38
2
Allokutzneria
1
1
Alloprevotella
96
193
2
Alloscardovia
27
52
28
Alocasia
1
Alsobacter
1
Altererythrobacter
3
6
4
Alteribacillus
1
Alterococcus
14
Alteromonas
11
4
Altibacter
1
Alysiella
2
2
Amaricoccus
1
1
14
Ameyamaea
3
Aminicella
206
Aminiphilus
1
31
Aminipila
4
Aminivibrio
16
Aminobacter
1
4
Aminobacterium
8
11
Aminomonas
25
4
Ammonifex
5
86
Ammoniphilus
11
13
Amnibacterium
1
Amphibacillus
13
4
Amphritea
2
8
Amycolatopsis
2
9
Amylibacter
3
Anabaenopsis
1
Anaerobacillus
25
1
70
Anaerobacter
65
Anaerobacterium
49
17
4
Anaerobiospirillum
12
Anaerobium
136
20
Anaerobranca
205
195
Anaerobutyricum
4
Anaerocella
71
Anaerococcus
409
272
6
124
Anaerocolumna
356
8
Anaerofilum
261
224
8
255
Anaerofustis
213
268
52
Anaeroglobus
22
241
Anaerolinea
4
18
15
Anaeromassilibacillus
10
Anaeromusa
5
44
Anaeromyxobacter
262
2
Anaerophaga
4
Anaeroplasma
49
86
1
21
Anaerorhabdus
7
Anaerosalibacter
107
Anaerosinus
37
7
Anaerosphaera
39
Anaerospora
73
Anaerosporobacter
589
265
6
Anaerostipes
827
458
39
255
Anaerotaenia
3
Anaerotignum
5
Anaerotruncus
774
380
31
258
Anaerovibrio
9
2
1
233
Anaerovorax
286
20
14
Anaplasma
7
1
Anderseniella
4
Andreprevotia
1
Aneurinibacillus
1
33
3
Angelakisella
23
Annandia
2
Anoxybacillus
4
16
25
Anoxybacter
4
Anoxynatronum
291
Antarctobacter
1
aphid P-endosymbionts
1
3
Apibacter
1
Aquabacterium
5
13
1
Aquamicrobium
4
Aquaspirillum
10
Aquibacter
1
6
Aquicella
5
Aquiflexum
4
1
Aquihabitans
9
Aquimarina
7
7
Aquimonas
9
1
Aquincola
1
Aquipuribacter
1
3
Aquisalimonas
22
Aquisphaera
2
Aquitalea
3
7
Arabia
1
1
Arachidicoccus
3
Arcanobacterium
34
17
1
8
Archaeoglobus
1
Archangium
2
1
Arcicella
47
Arcobacter
2
4
11
Arcticibacterium
1
Ardenticatena
9
Arenibacter
1
4
Arenimonas
18
Argyropelecus
1
Arhodomonas
7
Aridibacter
13
Armatimonas
1
Aromatoleum
1
Arsenicicoccus
1
1
Arsenophonus
24
4
Arthothelium
1
Arthrobacter
15
3
1
55
Arthronema
2
Arthrospira
1
1
6
Arum
1
Asaccharobacter
11
Asaccharospora
104
Asaia
4
1
Asinibacterium
3
Asteroleplasma
74
114
1
Asticcacaulis
1
23
95
Atlantibacter
1
Atopobium
118
164
3
81
Atopococcus
9
Atopostipes
26
Aurantimicrobium
1
Aurantimonas
1
Auraticoccus
1
3
Aureibacter
4
Aureicoccus
1
Aureimonas
1
1
Aureispira
1
Aureitalea
3
Auricoccus
1
Auritidibacter
1
Austwickia
1
Avibacterium
31
27
Azoarcus
3
1
23
Azohydromonas
5
Azonexus
7
Azorhizobium
1
1
Azospira
12
2
1
Azospirillum
2
157
2
51
Bacillus
81
198
1
181
Bacillus altitudinis complex
3
Bacteria
2
Bacterioplanes
1
1
Bacteriovorax
1
10
1
Bacteroides
838
433
18
287
Baia
34
Balneatrix
6
Balneola
95
22
Barnesiella
444
384
5
8
Barrientosiimonas
11
Bartonella
2
14
Basfia
3
1
Basilea
1
Bdellovibrio
1
4
Beggiatoa
1
Beijerinckia
2
Belliella
13
3
Bellilinea
2
Belnapia
1
1
Bergeyella
15
5
Bernardetia
37
1
Beutenbergia
1
Bibersteinia
1
2
Bifidobacterium
658
421
16
278
Bilophila
647
33
253
Biostraticola
15
Bisgaardia
36
Bittarella
8
Bizionia
2
Blastocatella
3
Blastochloris
3
Blastococcus
1
3
Blastocystis
2
Blastomonas
1
Blastopirellula
8
Blattabacterium
4
Blautia
841
444
39
288
Bogoriella
7
Bombiscardovia
1
3
Bordetella
27
4
Borrelia
2
10
Borreliella
3
Bosea
3
5
7
Bowmanella
32
Brachiaria
1
Brachybacterium
15
7
37
Brachymonas
1
Brachyspira
14
19
Bradymonas
1
Bradyrhizobium
12
1
11
Branchiibius
4
Brassicibacter
303
5
Brenneria
188
9
Breoghania
1
Brevefilum
1
Brevibacillus
47
1
25
Brevibacterium
70
49
26
Brevifollis
7
Brevinema
2
Brevundimonas
14
15
17
Brochothrix
5
163
Brockia
12
Brucella
1
1
Bryobacter
3
Bulleidia
5
30
1
43
Burkholderia
2
26
10
68
Burkholderia cepacia complex
4
Bursatella
1
Buttiauxella
57
1
1
Butyricicoccus
79
271
37
6
Butyricimonas
482
392
31
220
Butyrivibrio
432
436
30
194
Bythopirellula
5
Caballeronia
11
Caedibacter
2
Caenispirillum
9
Caldalkalibacillus
64
Caldanaerobacter
1
46
14
Caldanaerobius
17
Caldanaerovirga
2
Caldicellulosiruptor
29
1
236
Caldicoprobacter
125
7
Caldilinea
4
96
Caldimicrobium
1
1
Caldimonas
11
Caldinitratiruptor
117
Caldisalinibacter
209
Caldisericum
1
1
Calditerrivibrio
4
1
Caldithrix
1
63
Calochaete
4
Calolisianthus
1
Caloramator
1
292
10
249
Caloribacterium
5
Calothrix
41
124
Camarhynchus
1
Camelimonas
2
Camellia
1
Caminibacter
1
Caminicella
286
4
Campylobacter
296
189
4
108
Campylotropis
1
Candidatus Amoebophilus
222
Candidatus Aquiluna
1
Candidatus Arthromitus
3
Candidatus Azobacteroides
35
Candidatus Babela
2
Candidatus Blochmannia
72
Candidatus Contubernalis
30
Candidatus Endobugula
16
Candidatus Glomeribacter
118
Candidatus Gullanella
2
Candidatus Ishikawaella
1
Candidatus Kinetoplastibacterium
3
Candidatus Microthrix
1
Candidatus Nitrosoglobus
1
Candidatus Pelagibacter
4
Candidatus Phlomobacter
4
Candidatus Phytoplasma
8
224
Candidatus Planktophila
1
2
Candidatus Portiera
1
Candidatus Protochlamydia
1
Candidatus Regiella
13
Candidatus Rhabdochlamydia
27
Candidatus Saccharimonas
20
Candidatus Scalindua
4
Candidatus Soleaferrea
541
4
Candidatus Stoquefichus
127
1
Candidatus Sulcia
1
2
Candidatus Tammella
114
Candidatus Vidania
1
Candidatus Walczuchella
1
Capnocytophaga
13
12
9
Caproiciproducens
1
31
4
Carboxydocella
12
154
Carboxydothermus
5
4
Carboxylicivirga
134
1
Cardiobacterium
10
65
6
Carnimonas
13
Carnobacterium
10
2
16
Casaltella
299
4
Castellaniella
1
Catabacter
106
78
Catellicoccus
1
2
Catenibacterium
308
148
1
83
Catenisphaera
41
2
Catenovulum
1
Catenulispora
1
4
Catonella
11
428
17
224
Caulobacter
4
7
6
Cecembia
9
Cedecea
47
Celeribacter
3
Celerinatantimonas
6
Cellulomonas
31
12
Cellulophaga
4
4
Cellulosibacter
20
Cellulosilyticum
15
424
2
4
Cellulosimicrobium
3
Cellvibrio
13
3
Centipeda
19
Cerasicoccus
107
81
Cereibacter
1
Cesiribacter
18
Cetobacterium
4
17
16
Chamaesiphon
4
3
Chania
10
3
Chelativorans
4
1
Chelatococcus
2
1
Chelonobacter
1
7
Chiayiivirga
2
Chiropotes
1
Chishuiella
5
Chitinilyticum
2
Chitinimonas
12
Chitinispirillum
7
Chitinivibrio
2
Chitinolyticbacter
1
Chitinophaga
18
10
Chlamydia
1
1
Chloracidobacterium
9
3
Chlorobaculum
221
Chlorobium
1
1
Chloroflexus
1
Chlorogloeopsis
7
Chloroherpeton
10
3
Chondrocystis
1
Chondromyces
2
15
Chordaria
1
Christensenella
137
60
17
12
Chromatium
3
78
Chromobacterium
7
21
Chromohalobacter
3
Chroococcidiopsis
2
1
Chroococcus
101
Chryseobacterium
11
33
27
Chryseolinea
8
4
Chryseomicrobium
10
Chrysopa
1
Chthoniobacter
4
8
Chthonomonas
32
3
Cichlasoma
1
Citreitalea
1
Citricoccus
1
1
Citromicrobium
3
Clavibacter
2
4
Cloacibacillus
115
68
19
Cloacibacterium
6
7
4
Clostridiisalibacter
5
Clostridioides
335
54
3
10
Clostridium
823
433
19
285
Cnuella
3
Cobetia
1
Cocleimonas
2
Coenonia
2
Cohaesibacter
1
1
Cohnella
24
110
Coleofasciculus
1
Colidextribacter
1
25
Collimonas
14
5
Collinsella
814
381
34
228
Colwellia
17
4
Comamonas
31
22
18
Commensalibacter
2
Conchiformibius
1
Conexibacter
6
2
Confluentimicrobium
1
Congregibacter
3
coot
1
Coprobacillus
171
216
5
258
Coprobacter
314
288
11
1
Coprococcus
2
444
33
282
Coprothermobacter
6
23
3
Coptothyris
1
Coraliomargarita
26
89
Corallibacter
1
Coriobacterium
8
2
30
Corticibacter
2
Corynebacterium
497
257
6
156
Couchioplanes
5
1
Couratari
1
Coxiella
12
1
Craurococcus
2
Criblamydia
23
Crinalium
1
1
Croceibacter
6
1
Croceicoccus
1
Cronobacter
88
34
4
Crossiella
1
Cruoricaptor
1
33
Cryobacterium
11
3
1
Cryomorpha
48
Cryptanaerobacter
1
Cryptobacterium
3
139
1
Cucumibacter
2
Cupriavidus
2
21
5
Curculigo
1
Curtobacterium
1
3
Curvibacter
10
3
2
Cutibacterium
36
6
1
Cyanobacterium
22
38
Cyanobium
1
3
1
Cyanothece
1
Cyclobacterium
22
4
Cycloclasticus
16
5
Cyclonatronum
3
Cylindrospermum
1
Cyphomandra
5
1
Cystobacter
16
6
Cytophaga
1
31
1
Dactylosporangium
2
Dasania
11
Dechloromonas
31
Deefgea
3
Deferribacter
14
56
Deferrisoma
12
Defluviicoccus
5
Defluviimonas
3
Defluviitalea
2
89
Defluviitoga
1
1
Dehalobacter
101
5
4
Dehalobacterium
9
121
Dehalococcoides
19
3
Dehalogenimonas
76
43
Deinococcus
10
55
1
133
Delftia
81
5
6
Deltavirus
1
Demequina
23
1
Dendrosporobacter
31
Denitratisoma
1
6
27
Denitrobacter
1
Denitrobacterium
1
7
1
Denitrovibrio
3
Dermabacter
57
31
10
Dermacoccus
1
1
4
Dermatosorus
1
Derxia
14
Desemzia
93
1
Desertibacter
3
Desmospora
5
Desulfacinum
17
Desulfallas
1
Desulfarculus
74
1
Desulfatibacillum
1
1
Desulfatiferula
13
Desulfatiglans
4
Desulfatirhabdium
1
Desulfatitalea
5
Desulfitibacter
1
33
2
Desulfitispora
19
Desulfitobacterium
1
48
65
Desulfobacca
16
2
Desulfobacter
5
27
Desulfobacterium
132
1
Desulfobacula
3
Desulfobaculum
8
Desulfobotulus
3
Desulfobulbus
37
1
Desulfocapsa
1
1
Desulfocarbo
63
Desulfocella
1
142
Desulfococcus
3
4
Desulfocurvus
1
Desulfofaba
24
Desulfofarcimen
4
Desulfofrigus
17
26
Desulfofustis
5
Desulfoglaeba
114
Desulfohalobium
3
2
Desulfomicrobium
107
19
Desulfomonile
4
45
Desulfonatronobacter
3
Desulfonatronovibrio
4
59
Desulfonatronum
23
80
Desulfonauticus
6
25
Desulfonema
14
Desulfonispora
50
Desulfoplanes
8
Desulforegula
31
Desulforhabdus
1
Desulfosalsimonas
2
Desulfosarcina
13
20
Desulfosoma
61
Desulfosporosinus
1
109
1
141
Desulfotalea
1
1
Desulfothermus
4
Desulfotomaculum
2
353
10
150
Desulfovibrio
409
397
16
223
Desulfovirga
6
Desulfurella
2
2
Desulfuribacillus
3
Desulfurispira
2
Desulfurispirillum
67
Desulfurispora
246
126
Desulfurivibrio
2
1
Desulfurobacterium
4
1
Desulfurococcus
1
Desulfuromonas
31
12
Desulfuromusa
2
129
Dethiobacter
1
8
28
Dethiosulfatibacter
148
Dethiosulfovibrio
52
128
Devosia
1
30
99
Devriesea
1
Dialister
517
404
13
169
Diaphorobacter
1
3
Dichelobacter
1
Dichotomicrobium
5
Dickeya
9
1
10
Dictyoglomus
33
1
Dielma
331
254
9
3
Dientamoeba
1
Dietzia
3
59
18
Dinoroseobacter
1
Diplorickettsia
12
Diplosphaera
8
Dissulfuribacter
7
Dokdonella
8
112
Dokdonia
12
4
Dolichospermum
177
Dolosicoccus
2
Dolosigranulum
4
86
Dongia
90
Dorea
828
451
38
282
Doritaenopsis
1
Draconibacterium
9
1
Duganella
1
2
Duncaniella
4
Duodenibacillus
8
1
Dyadobacter
41
88
Dyella
2
2
Dysgonomonas
11
286
4
216
Echinicola
28
4
Echinops
1
Ectothiorhodosinus
3
Ectothiorhodospira
17
76
Edaphobacter
28
Edwardsiella
10
8
Effusibacillus
95
Eggerthella
607
340
25
219
Eggerthia
2
141
Egibacter
1
Egicoccus
1
Ehrlichia
9
79
Eikenella
11
4
1
Eionea
1
Eisenbergiella
545
324
23
2
Eisenibacter
50
Ekhidna
1
Elizabethkingia
21
6
Elstera
2
Elusimicrobium
7
29
3
Emcibacter
56
Empedobacter
8
1
Emticicia
89
2
201
Enchytraeus
1
Endobacter
1
Endomicrobium
1
Endozoicomonas
1
Enhydrobacter
2
Enorma
35
47
3
Ensifer
1
11
1
Enterobacter
223
27
9
123
Enterococcus
152
77
29
232
Enterorhabdus
283
147
7
4
Enterovibrio
1
Entomoplasma
12
11
Epibacterium
1
Epulopiscium
63
4
1
Ercella
120
1
Ereboglobus
3
Eremococcus
10
2
Erinaceus
1
Erwinia
1
87
1
84
Erysipelatoclostridium
801
456
36
10
Erysipelothrix
290
3
218
Erythrobacter
8
32
Escherichia
1
18
10
204
Ethanoligenens
370
134
Eubacterium
168
444
39
275
Eucorethra
1
Eudoraea
35
Euglena
1
Euryhalocaulis
7
Euzebya
16
123
Euzebyella
1
Exiguobacterium
18
8
Extensimonas
1
Ezakiella
23
1
Fabibacter
6
Facklamia
56
327
34
Faecalibacterium
819
444
37
286
Faecalibaculum
1
Faecalicatena
22
Faecalicoccus
274
4
1
Faecalitalea
53
19
8
Falcatimonas
1
15
Falsiporphyromonas
124
Fangia
14
Fastidiosipila
81
36
2
3
Fenollaria
244
5
1
Fergusonia
1
6
Fermentimonas
4
Ferrimicrobium
2
6
Ferrimonas
26
2
Ferrithrix
75
Ferrovibrio
2
Ferrovum
1
Ferruginibacter
1
36
Fervidicella
4
Fervidobacterium
9
Fibrella
3
Fibrobacter
96
83
30
Fictibacillus
18
4
Filifactor
2
139
19
80
Filimonas
1
4
Fimbriimonas
17
2
Finegoldia
473
330
6
138
Fischerella
1
Flammeovirga
21
72
Flavicella
4
Flaviflexus
10
3
Flavihumibacter
2
Flavisolibacter
1
1
9
Flavitalea
1
5
Flavivirga
1
Flavobacterium
428
22
15
Flavonifractor
815
437
33
11
Flectobacillus
45
Flexibacter
1
3
2
Flexistipes
32
1
Flexithrix
7
Flexivirga
1
Flintibacter
26
Fluoribacter
1
Fluviicola
14
3
1
Fluviimonas
168
Fodinibius
2
Fodinicurvata
190
1
Fontibacter
8
Fonticella
2
49
Formosa
5
Fournierella
1
16
Francisella
21
15
Franconibacter
4
Frankia
4
Frateuria
1
1
Fretibacter
14
Fretibacterium
103
1
Friedmanniella
13
5
Frigoribacterium
1
1
Frischella
1
3
Frondicola
1
Fructobacillus
17
15
Fuchsiella
4
Fucophilus
2
Fulvitalea
34
Fulvivirga
50
Fusibacter
85
18
Fusicatenibacter
799
440
18
1
Fusobacterium
141
193
4
115
Gabonibacter
10
Gaetbulibacter
1
Gaiella
2
23
Galenea
20
Gallaecimonas
3
Gallibacterium
1
15
5
Gallicola
76
29
1
Gallionella
14
30
Garciella
9
Gardnerella
44
48
2
14
Garritya
2
Gelria
228
1
Gemella
185
209
4
240
Geminicoccus
1
20
Geminocystis
1
Gemmata
1
4
5
Gemmatimonas
14
3
Gemmatirosa
2
1
Gemmiger
403
18
Gemmobacter
3
Geoalkalibacter
1
Geobacillus
6
22
12
89
Geobacter
20
20
Geodermatophilus
6
2
Geofilum
38
Geopsychrobacter
4
Georgenia
13
4
Geosporobacter
4
Geothermobacter
1
Geothrix
149
107
Geovibrio
1
8
Gibbsiella
4
Giesbergeria
1
2
Gilliamella
1
Gillichthys
1
Gillisia
14
145
Gilvimarinus
1
Gimesia
2
Glaciecola
37
46
Glaciimonas
2
Glaesserella
1
Globicatella
2
14
Gloeobacter
7
1
Gluconacetobacter
6
1
Gluconobacter
2
34
Glutamicibacter
33
Glycera
1
Glycocaulis
1
1
Glycomyces
7
22
Gorbachella
1
1
Gordonia
4
36
6
Gordonibacter
481
242
26
7
Gottschalkia
61
4
Gracilibacillus
50
Gracilibacter
3
210
3
Gracilimonas
138
Gramella
3
35
Granulibacter
4
Granulicatella
363
34
110
Granulicella
6
12
Granulosicoccus
34
1
Gryllotalpicola
5
1
Guggenheimella
159
Gymnocintractia
1
Gynuella
19
1
Haematobacter
3
3
Haematospirillum
2
Haemophilus
574
349
16
214
Hafnia
13
1
Hahella
86
30
Halanaerobacter
1
3
Halanaerobaculum
3
Halanaerobium
3
48
Halarsenatibacter
29
Haliangium
1
15
23
Haliea
1
6
Halioglobus
1
1
Haliscomenobacter
38
3
Halobacillus
14
4
Halobacteriovorax
22
4
Halobacteroides
3
1
Halocella
5
4
Halochromatium
95
22
Halodesulfovibrio
3
Haloferax
1
Haloferula
16
Halolactibacillus
4
Halomicronema
1
3
Halomonas
1
212
1
41
Halonatronum
3
Haloplasma
1
9
Halopolyspora
62
Halorhodospira
27
10
Halospina
7
Halospirulina
1
Halotalea
1
Halothermothrix
65
1
Halothiobacillus
18
2
Halyseosphaera
1
Hartmannibacter
1
Hathewaya
238
Hazenella
10
Helcococcus
22
61
29
Heleococcum
1
Helicobacter
4
14
90
Heliimonas
5
Heliobacterium
3
1
Heliomonas
1
Heliophilum
5
Heliorestis
5
102
Heliothrix
1
Hellea
5
Henriciella
199
Heratemis
1
Herbaspirillum
270
25
13
116
Herbinix
165
6
4
Herminiimonas
83
7
Herpetosiphon
4
Hespellia
523
427
16
Hippea
2
1
Hirschia
1
Histophilus
4
1
Hoeflea
1
Holdemanella
257
4
4
Holdemania
604
376
23
246
Holophaga
1
Hoppeia
2
Howardella
137
308
4
Hoyosella
22
Hugenholtzia
13
Humibacter
7
Hungateiclostridium
4
Hungatella
418
34
6
Hwangdonia
8
Hydrocarboniphaga
1
192
Hydrocoleum
1
Hydrogenibacillus
34
5
Hydrogenispora
226
Hydrogenoanaerobacterium
240
377
Hydrogenobacter
1
2
Hydrogenobaculum
4
Hydrogenophaga
1
2
Hydrogenophilus
3
89
106
Hydrogenothermus
5
Hydrotalea
1
12
Hylemonella
1
Hymenobacter
3
15
168
Hyphomicrobium
2
8
43
Hyphomonas
4
24
Iamia
1
2
Ianmoorea
3
Icaria
1
Ichthyobacterium
1
Ideonella
2
Idiomarina
5
17
Ignatzschineria
5
Ignavibacterium
23
20
Ignavigranum
2
40
Ihubacter
29
Ileibacterium
3
Ilumatobacter
36
Ilyobacter
4
Immundisolibacter
3
Imperialibacter
16
Indibacter
11
Indioceanicola
3
Inquilinus
5
3
Insolitispirillum
106
Intestinibacillus
9
Intestinibacter
817
388
21
3
Intestinimonas
765
430
37
11
Iodobacter
5
3
Isochromatium
2
Janibacter
2
1
2
Jannaschia
1
1
Janthinobacterium
4
6
Jatropha
1
Jatrophihabitans
3
1
Jeotgalibaca
3
Jeotgalibacillus
2
Jeotgalicoccus
2
26
4
Jiangella
1
6
Johnsonella
17
309
255
Jonesia
36
2
Jonquetella
11
48
1
Kaistia
17
3
Kallipyga
39
1
Kallotenue
9
Kandleria
72
Kangiella
22
1
Kastovskya
3
Keratinibaculum
6
Ketobacter
1
Ketogulonicigenium
1
1
Kiloniella
25
3
Kineococcus
4
2
Kineosporia
4
Kingella
12
3
3
Kistimonas
1
Kitasatospora
4
13
Klebsiella
158
36
7
73
Kluyvera
575
4
5
Kockovaella
1
Kocuria
14
17
13
Komagataeibacter
16
2
Kordia
1
Kordiimonas
2
Koreibacter
2
Kosakonia
113
3
Kosmotoga
1
11
Kozakia
1
3
Kribbella
132
17
Kushneria
1
3
55
Kutzneria
1
Kyrpidia
54
1
Kytococcus
2
2
Labilibacter
2
Labilithrix
27
Labrenzia
1
Labrys
1
Laceyella
4
21
Lachnoanaerobaculum
23
430
4
Lachnobacterium
13
323
29
241
Lachnoclostridium
444
39
10
Lachnospira
757
413
35
283
Lachnotalea
3
Lacibacter
3
2
Lacibacterium
59
Lacihabitans
5
Lacimicrobium
1
Lacinutrix
1
3
Lactobacillus
618
428
21
253
Lactococcus
286
260
10
128
Lactonifactor
504
303
29
Lacunisphaera
3
Lamprocystis
2
Laribacter
1
3
Larkinella
1
Lautropia
20
18
10
Lawsonella
1
Lawsonia
256
5
Lebetimonas
6
Lecanora
1
Legionella
1
23
169
Leifsonia
2
1
1
Leisingera
1
Lelliottia
4
Leminorella
1
Lentibacillus
25
41
Lentisphaera
3
Lentzea
3
Leptolinea
44
Leptolyngbya
2
1
70
Leptonema
6
Leptospira
8
96
Leptospirillum
11
1
Leptothrix
45
Leptotrichia
43
23
19
Leucobacter
20
7
Leuconostoc
88
324
4
124
Leucothrix
3
10
Levilinea
1
Levinea Young et al. 1971
62
3
14
55
Levyella
185
1
Lewinella
7
21
Libanicoccus
1
1
Liberibacter
6
1
Limibacillus
12
Limibacter
2
Limimonas
3
Limisphaera
2
Limnobacter
1
15
178
Limnobaculum
1
Limnochorda
2
1
Limnohabitans
2
3
Limnoraphis
2
Lishizhenia
1
Listeria
1
128
57
Litoribacillus
39
Litoribacter
10
Litoribrevibacter
5
Litoricola
21
6
Litorilinea
7
Litorilituus
33
4
Loktanella
5
1
Longilinea
1
1
Longimonas
34
Lucinoma
1
Ludwigia
1
Luminiphilus
30
Luna cluster
1
3
Lunatimonas
3
Luteibacter
1
30
143
Luteibaculum
1
Luteimonas
16
7
Luteipulveratus
1
Luteitalea
1
Luteivirga
4
Luteococcus
7
Luteolibacter
1
14
119
Lutibacter
1
15
4
Lutispora
103
1
Lutra
1
Lysinibacillus
9
7
44
Lysinimonas
1
Lysobacter
2
46
62
MAC
2
Macrococcus
1
6
114
Madoqua
1
Mageeibacillus
1
Magnetococcus
8
1
Magnetospira
3
1
Magnetospirillum
4
2
Magnetovibrio
3
Mahella
9
Malassezia
2
Maledivibacter
17
Mangrovibacter
1
Mangroviflexus
2
Mannheimia
8
39
104
Maribacter
1
5
Maricaulis
9
2
Marichromatium
1
8
44
Marinicauda
1
Marinicella
8
Marinifilum
115
Mariniflexile
3
4
Marinilabilia
22
1
Marinilactibacillus
4
Marinimicrobium
1
Marininema
1
Mariniphaga
15
Mariniradius
7
Marinitalea Kim et al. 2011
1
Marinithermofilum
2
Marinithermus
1
Marinitoga
1
6
Marinobacter
83
10
Marinobacterium
20
4
Marinococcus
4
15
Marinomonas
19
5
Marinoscillum
18
Marinospirillum
25
46
Marinovum
1
Mariprofundus
13
1
Marispirillum
35
Maritalea
1
Maritimibacter
1
Marivirga
2
1
Marivivens
1
Marixanthomonas
17
Marmoricola
10
1
Marseillibacter
1
36
Martelella
2
Marvinbryantia
636
402
3
4
Massilia
7
13
20
4
Massilioclostridium
1
24
Massiliprevotella
3
Mechercharimyces
7
2
Mediterranea
3
Megamonas
69
121
2
51
Meganema
14
Megasphaera
566
268
245
Meiothermus
1
12
106
Meiracyllium
1
Melaminivora
1
Melghiribacillus
3
Melghirimyces
21
Melioribacter
301
11
4
Melissococcus
2
9
Melittangium
5
1
Meniscus
19
Merdibacter
1
7
Mesoaciditoga
2
Mesoflavibacter
1
Mesonia
6
1
Mesoplasma
12
122
Mesorhizobium
10
5
5
Mesotoga
1
Metabacterium
1
2
Metakosakonia
1
Metallibacterium
1
Metallosphaera
5
Metaprevotella
3
Methanimicrococcus
1
Methanobrevibacter
227
112
4
96
Methanocorpusculum
1
1
2
Methanolinea
1
Methanomassiliicoccus
26
19
Methanomethylophilus
23
Methanosphaera
40
17
2
18
Methylacidimicrobium van Teeseling et al. 2014
1
Methylarcula
12
Methylibium
3
Methylobacillus
48
112
Methylobacter
6
Methylobacterium
9
19
24
Methylocaldum
2
4
Methyloceanibacter
1
Methylocella
4
12
Methylococcus
1
Methylocystis
5
2
Methylogaea
1
29
Methyloglobulus
36
Methylohalobius
11
Methylohalomonas
5
Methyloligella
2
Methylomagnum
4
Methylomarinovum
9
Methylomicrobium
4
3
Methylomonas
6
3
Methylomusa
4
Methylonatrum
2
158
Methyloparacoccus
2
Methylophaga
79
9
Methylophilus
11
Methylorubrum
4
Methylosinus
6
Methylosoma
1
Methylosphaera
4
Methylotenera
45
3
Methylothermus
1
Methyloversatilis
33
10
Methylovulum
1
Micavibrio
3
Microaerobacter
13
Microbacter
94
Microbacterium
11
113
53
Microbulbifer
7
Microchaete
2
Micrococcus
10
2
4
Microcoleus
42
Microcystis
4
Microlunatus
21
2
Micromonospora
5
13
Micropruina
1
1
Microscilla
1
Microterricola
4
Microtetraspora
2
3
Microvirga
1
5
3
Microvirgula
2
Millisia
1
Miniimonas
1
Mitsuaria
3
Mitsuokella
18
38
3
123
Mixta
1
Mizugakiibacter
8
Mobilitalea
61
2
Mobiluncus
129
159
1
35
Modestobacter
2
52
Modicisalibacter
1
Mogibacterium
529
315
1
230
Moheibacter
10
Mongoliicoccus
8
Mongoliitalea
1
Monoglobus
4
Moorea
34
1
Mooreia
2
Moorella
15
204
Moraxella
14
126
6
Mordavella
1
6
4
Morganella
4
92
35
Moritella
1
1
Moryella
700
342
4
39
Mucilaginibacter
23
5
4
Mucinivorans
24
1
Mucispirillum
3
2
Murdochiella
247
1
4
Muribaculum
4
Muricauda
1
10
Muriicola
1
Murimonas
412
3
Myceligenerans
8
Mycobacterium
32
21
63
Mycobacterium chelonae complex
2
Mycobacterium complex
2
Mycolicibacterium
3
Mycoplana
1
Mycoplasma
10
282
1
214
Myroides
12
9
Myxococcus
1
Nafulsella
7
Nakamurella
2
3
Nannocystis
10
12
Nanoscypha
1
Natranaerobaculum
3
Natranaerobius
10
1
Natranaerovirga
284
7
Natribacillus
1
Natroniella
3
Natronincola
40
222
Naumannella
7
Nautilia
5
1
Ndongobacter
1
Necropsobacter
8
Negativibacillus
1
29
1
Negativicoccus
131
119
105
Neglecta
1
Neoasaia
1
1
Neochlamydia
1
Neorhizobium
4
Neorickettsia
1
6
Neoscardovia
37
Neptuniibacter
2
Neptunomonas
1
1
Nereis
1
Nesterenkonia
51
7
Nevskia
1
3
9
Niabella
1
319
61
Niastella
1
3
2
Nibribacter
27
Nicoletella
4
Nigella
1
Nisaea
19
Nitratifractor
2
Nitratireductor
4
Nitratiruptor
1
1
Nitriliruptor
5
Nitrincola
1
Nitrobacter
3
1
Nitrococcus
13
Nitrolancea
4
Nitrosococcus
1
15
40
Nitrosomonas
2
143
5
3
Nitrosopumilus
1
Nitrososphaera
1
1
Nitrosospira
1
3
1
Nitrospina
2
Nitrospira
1
2
Nitrospirillum
3
1
Niveispirillum
97
1
Nocardia
3
4
Nocardioides
3
52
4
Nocardiopsis
20
5
Nodularia
1
36
Nonomuraea
13
48
Nosocomiicoccus
6
Nostoc
1
86
Novibacillus
8
4
Noviherbaspirillum
12
Novispirillum
59
146
Novosphingobium
7
17
7
Oblitimonas
1
Oceanibaculum
1
Oceanicoccus
25
1
Oceanimonas
2
1
Oceanirhabdus
3
Oceanisphaera
1
Oceanithermus
1
Oceanobacillus
14
4
Oceanobacter
1
Oceanospirillum
33
4
Oceanotoga
1
Ochrobactrum
28
3
22
Octadecabacter
2
3
Odoribacter
622
368
33
246
Oenococcus
37
63
Oerskovia
1
Ohtaekwangia
30
Okeania
2
Oleibacter
3
Oleiphilus
3
Oleispira
2
Oleomonas
23
Oligella
8
12
18
Oligosphaera
15
Oligotropha
1
Olivibacter
3
188
Olleya
4
Olsenella
64
216
9
24
Opitutus
1
6
5
Orbus
2
Orenia
30
Oribacterium
41
439
28
232
Orientia
51
1
Ornatilinea
4
Ornithinicoccus
1
2
Ornithinimicrobium
4
Ornithobacterium
3
4
Orrella
1
Oscillatoria
61
Oscillibacter
742
443
38
14
Oscillospira
622
1
32
274
Osmadenia
1
Otariodibacter
10
Ottowia
3
Owenweeksia
1
1
Oxalicibacterium
47
Oxalobacter
141
8
122
Oxalophagus
1
18
Oxobacter
5
112
Oxynema
2
Paenalcaligenes
1
1
Paenarthrobacter
1
1
Paenibacillus
1
353
13
88
Paeniclostridium
46
4
Paeniglutamicibacter
1
Paenisporosarcina
33
5
Pagothenia
1
Paludibacter
44
3
8
Paludibacterium
2
Paludibaculum
6
Paludisphaera
3
Panacagrimonas
2
Pandoraea
12
5
Pannonibacter
4
Panonychus
1
Pantoea
188
66
1
12
Papillibacter
418
225
29
Parabacteroides
762
452
37
286
Paraburkholderia
39
1
4
Parachlamydia
1
1
Paraclostridium
21
Paracoccus
1
20
9
Paraeggerthella
15
43
Parafilimonas
27
Parageobacillus
4
1
Paraglaciecola
5
1
Paraliobacillus
3
Parapedobacter
14
88
Paraperlucidibaca
1
Paraphotobacterium
1
Paraprevotella
212
382
8
213
Pararhodospirillum
1
1
Parasaccharibacter
4
1
Parascardovia
4
3
79
Parasegetibacter
2
Parashewanella
1
Parasporobacterium
170
182
17
Parasutterella
596
423
24
7
Parolsenella
1
Parvibacter
94
27
1
Parvibaculum
1
Parvimonas
96
86
5
Parvularcula
6
1
Pasteurella
20
11
24
Pasteuria
11
Patulibacter
2
1
Paucibacter
2
11
Paucimonas
2
Pectinatus
66
1
213
Pectobacterium
3
32
4
Pediococcus
34
56
157
Pedobacter
4
152
23
255
Pedomicrobium
1
1
8
Pelagibaca
1
Pelagibacterium
1
Pelagibius
2
Pelagicoccus
31
75
Pelistega
1
3
Pelobacter
21
8
Pelodictyon
1
Pelolinea
3
1
Pelomonas
20
4
3
Pelosinus
120
4
Pelospora
22
Pelotomaculum
47
111
Peptoanaerobacter
18
Peptoclostridium
665
69
1
Peptococcus
406
181
5
252
Peptoniphilus
439
371
6
258
Peptostreptococcus
206
186
2
69
Perameles
1
Peredibacter
4
Perexilibacter
18
Perlucidibaca
3
Permianibacter
21
Persephonella
1
Persicirhabdus
9
Persicitalea
30
Persicobacter
5
5
Petrimonas
13
4
Petrotoga
2
Phaeobacter
9
Phaeobacterium
6
Phaeochromatium
7
Phaeocystidibacter
7
Phaeodactylibacter
8
Phascolarctobacterium
556
385
19
256
Phaseolibacter
2
Phenylobacterium
2
11
14
Phocaeicola
1
108
Phocea
11
Phoenicibacter
1
Phormidium
1
Photobacterium
1
14
4
Photorhabdus
54
4
Phreatobacter
1
1
Phycicoccus
1
Phycisphaera
2
1
Phyllobacterium
30
1
Phytoactinopolyspora
2
Phytomonospora
24
Pigmentiphaga
16
Pilibacter
12
Pilimelia
1
9
Pimelobacter
3
Pirellula
9
2
Pisciglobus
15
Piscinibacter
3
Piscirickettsia
9
1
Planctomyces
1
1
Planctopirus
1
1
plane trees
1
Planifilum
1
8
138
Planktomarina
2
Planktothrix
2
3
Planococcus
39
45
Planomicrobium
38
3
7
Plantactinospora
1
Plantibacter
1
1
Plasticicumulans
75
Pleionea
1
Pleomorphomonas
5
1
Plesiocystis
3
Pleurocapsa
1
Pleuronectes
1
Pluralibacter
18
3
Polaribacter
1
8
Polaromonas
2
6
Polycladomyces
21
Polymorphobacter
2
Polymorphum
2
Polynucleibacter
47
Pontibacillus
77
61
Pontibacter
1
9
111
Ponticaulis
2
Pontivivens
1
Porphyrobacter
1
1
1
Porphyromonas
366
357
15
239
Portibacter
2
Porticoccus
1
Povalibacter
1
Pragia
143
4
Prauserella
2
Prevotella
480
456
23
280
Prochlorococcus
2
5
Prochlorothrix
1
Prognathochromis
1
Prolixibacter
3
Promicromonospora
1
3
Propionibacterium
121
16
9
16
Propionicimonas
1
4
Propioniferax
3
77
Propionigenium
3
10
Propionimicrobium
11
Propionispira
2
14
Propionispora
37
189
Propionivibrio
2
31
16
Prosthecobacter
15
48
Prosthecochloris
1
4
Proteiniborus
106
Proteiniclasticum
1
Proteiniphilum
40
14
4
Proteinivorax
50
Proteocatella
85
3
Proteus
17
58
1
11
Providencia
104
13
Pseudacidovorax
2
Pseudaeromonas
22
Pseudaminobacter
1
Pseudanabaena
4
Pseudarcicella
30
1
Pseudarthrobacter
1
Pseudoalteromonas
14
Pseudobacteroides
8
Pseudobutyrivibrio
833
273
27
252
Pseudochrobactrum
1
9
4
Pseudoclavibacter
53
166
12
Pseudoclostridium
4
Pseudodesulfovibrio
4
Pseudoduganella
6
Pseudoflavitalea
4
Pseudoflavonifractor
497
385
31
6
Pseudofulvibacter
1
Pseudofulvimonas
1
Pseudoglutamicibacter
6
Pseudohongiella
5
1
Pseudokineococcus
10
Pseudolabrys
1
pseudomallei group
4
Pseudomaricurvus
2
Pseudomonas
70
186
4
66
Pseudomonas chlororaphis group
4
Pseudonocardia
15
11
Pseudooceanicola
1
Pseudopedobacter
109
1
1
Pseudopropionibacterium
6
1
Pseudoramibacter
3
54
118
Pseudorhodobacter
51
Pseudorhodoferax
1
Pseudorhodoplanes
1
Pseudoscardovia
289
Pseudoscillatoria
202
Pseudospirillum
1
Pseudothermotoga
4
Pseudovibrio
2
1
Pseudoxanthobacter
2
Pseudoxanthomonas
6
22
5
Psychrilyobacter
10
Psychrobacter
2
76
119
Psychroflexus
20
24
Psychromicrobium
1
Psychromonas
16
7
Psychroserpens
2
2
Psychrosinus
11
Psychrosphaera
2
Pullulanibacillus
52
2
Puniceicoccus
73
31
Pusillimonas
3
1
Pyramidobacter
50
18
Pyrenomonas
1
Pyrinomonas
20
Pyxicoccus Reichenbach 2005
1
Qipengyuania
1
Quadrisphaera
1
Rahnella
11
1
Ralstonia
16
6
12
Ramlibacter
3
2
Raoultella
32
5
Raoultibacter
11
Raphidiopsis
3
Rapidithrix
6
Rarobacter
35
Rathayibacter
2
1
2
Rehaibacterium
2
Reichenbachiella
6
Reinekea
83
1
Renibacterium
1
Renobacter
4
Reyranella
6
Rhabdochromatium
8
Rheinheimera
4
43
2
Rhizobacter
7
Rhizobium
13
21
5
6
Rhizomicrobium
10
Rhodanobacter
32
1
Rhodobaca
1
Rhodobacter
4
2
25
Rhodobium
1
Rhodococcus
24
2
34
Rhodocyclus
1
Rhodocytophaga
1
22
Rhodoferax
2
20
Rhodoluna
3
Rhodomicrobium
3
1
Rhodonellum
21
Rhodopila
1
Rhodopirellula
1
1
Rhodoplanes
1
1
12
Rhodopseudomonas
5
12
3
Rhodospira
4
Rhodospirillum
1
2
121
Rhodothalassium
11
7
Rhodothermus
3
232
Rhodovibrio
16
65
Rhodovulum
3
22
4
Rickettsia
79
157
Rickettsiella
10
Riemerella
3
3
Rikenella
2
3
12
Risungbinella
15
Rivibacter
1
Rivicola
4
Rivularia
23
Robiginitalea
1
1
Robiginitomaculum
3
Robinsoniella
180
338
33
Rodentibacter
1
Romboutsia
548
392
3
1
Roseateles
3
1
Roseburia
837
444
39
284
Roseiarcus
3
Roseibacterium
1
1
Roseiflexus
8
1
Roseimarinus
5
Roseimicrobium
18
Roseitalea
1
Roseivirga
27
Roseivivax
2
Rosenbergiella
92
Roseobacter
3
Roseococcus
1
7
7
Roseomonas
4
8
26
Roseospira
6
34
Roseovarius
1
2
3
Rothia
158
10
24
76
Rubellimicrobium
3
10
4
Rubidibacter
2
Rubidimonas
26
Rubinisphaera
3
Rubribacterium
1
Rubritalea
80
84
Rubritepida
1
Rubrivivax
2
2
Rubrobacter
1
23
5
Rudaea
4
Rudanella
2
Ruegeria
1
Rufibacter
23
3
Ruminiclostridium
34
444
38
9
Ruminobacter
35
1
Ruminococcus
430
39
287
Rummeliibacillus
1
21
1
Runella
38
93
Ruthenibacterium
1
33
5
Saccharibacillus
11
Saccharibacter
9
Saccharicrinis
32
Saccharofermentans
77
2
Saccharomonospora
95
2
Saccharophagus
1
Saccharopolyspora
29
81
Saccharospirillum
6
Saccharothrix
1
1
Sagittula
1
Saguinus
1
Salegentibacter
4
Salibacterium
4
Salimicrobium
12
3
Salinibacillus
12
Salinibacter
1
Salinibacterium
2
Salinicoccus
47
140
Salinicola
1
1
Salinimicrobium
1
1
Salinimonas
4
Salinisphaera
11
1
Salinispira
4
Salinispirillum
104
Salinivenus
1
Salinivibrio
17
3
Salinivirga
1
Salipiger
1
Salisaeta
38
47
Salmonella
4
5
20
43
Sambucus
1
Sandaracinobacter
1
Sandaracinus
5
1
Sanguibacter
2
1
Saprospira
1
Sarcina
810
163
Scardovia
9
23
11
Schaalia
4
Schlegelella
3
2
6
Schleiferia
8
Schlesneria
1
Schumannella
1
Schwartzia
6
Scytonema
4
Sebaldella
1
23
Sedimentibacter
2
95
254
Sedimenticola
8
3
Sedimentisphaera
3
Sedimentitalea
1
Sediminibacillus
1
Sediminibacterium
1
13
Sediminicola
1
Sediminispirochaeta
1
Sediminitomix
38
Segetibacter
26
34
Segniliparus
16
1
Seinonella
10
Selenihalanaerobacter
33
Selenomonas
23
52
8
249
Sellimonas
1
Seminibacterium
1
Senegalimassilia
230
167
14
3
Seonamhaeicola
3
Serinibacter
1
Serinicoccus
9
6
Serpentinomonas
2
Serratia
8
68
3
190
Sharpea
10
112
Shewanella
70
168
Shigella
1
163
6
Shimazuella
1
6
Shimia
1
Shimwellia
1
Shinella
6
15
4
Shivajiella
1
Shuttleworthia
261
314
168
Siansivirga
1
3
Sideroxydans
1
Silanimonas
13
Silicimonas
1
Simiduia
10
1
Simkania
6
1
Simonsiella
3
Simplicispira
3
Singulisphaera
1
3
5
Sinibacillus
33
Sinobaca
1
Sinobacterium
59
Sinomonas
5
1
Sinorhizobium
5
Sinorhizobium fredii group
4
Sinorhizobium/Ensifer group
1
4
Sinosporangium
4
Siphonobacter
15
Skermanella
1
19
113
Slackia
273
252
19
233
Smithella
4
1
Sneathia
10
40
10
Sneathiella
4
Snodgrassella
1
Snowella
8
Sodalis
4
Soehngenia
1
11
Solimonas
4
Solirubrobacter
1
10
5
Solitalea
17
1
Solobacterium
103
63
2
2
Sorangium
2
1
4
Sphaerimonospora
3
Sphaerobacter
2
Sphaerochaeta
1
4
Sphaerospermopsis
1
Sphaerotilus
2
Sphingobacterium
4
84
3
255
Sphingobium
8
29
25
Sphingomicrobium
6
Sphingomonas
24
225
14
37
Sphingopyxis
3
11
4
Sphingorhabdus
3
1
Sphingosinicella
1
4
Spiribacter
8
4
Spirilliplanes
2
Spirillum
14
Spirochaeta
12
Spiroplasma
172
4
Spirosoma
4
5
Spirulina
3
Spongiibacter
1
Spongiibacterium
1
Spongitalea
1
Sporacetigenium
69
Sporanaerobacter
6
1
4
Sporichthya
7
2
Sporisorium
1
Sporobacter
429
404
11
Sporobacterium
1
265
1
Sporocytophaga
2
Sporohalobacter
8
Sporolactobacillus
3
62
Sporomusa
98
Sporosalibacterium
26
Sporosarcina
356
23
29
Sporotomaculum
76
125
Stackebrandtia
61
1
Stanieria
1
Staphylococcus
232
92
2
106
Stappia
1
Starria
43
Stella
90
Stenotrophomonas
30
37
29
Stenoxybacter
4
Steroidobacter
11
2
Sterolibacterium
6
Stigmatella
11
1
Stomatobaculum
18
179
1
Streptacidiphilus
8
Streptobacillus
2
31
3
Streptococcus
832
438
39
283
Streptohalobacillus
3
Streptomonospora
136
Streptomyces
85
2
48
Streptosporangium
5
6
Subdoligranulum
828
439
22
7
Subsaximicrobium
1
Succinatimonas
6
35
Succiniclasticum
37
109
5
16
Succinimonas
35
Succinispira
48
Succinivibrio
9
52
68
Sufflavibacter
1
Sulfitobacter
1
2
Sulfobacillus
15
13
Sulfuricaulis
3
Sulfuricella
1
Sulfuricurvum
3
Sulfuriferula
3
Sulfuriflexus
1
Sulfurifustis
3
1
Sulfurihydrogenibium
1
Sulfurimonas
1
1
Sulfurisoma
2
Sulfuritalea
1
Sulfurivirga
7
Sulfurospirillum
1
12
Sulfurovum
1
1
Sungkyunkwania
1
Sunxiuqinia
25
Sutterella
556
425
30
281
Suttonella
10
Swaminathania
1
Symbiobacterium
7
162
Symploca
5
Synechococcus
3
3
Synergistes
15
4
5
Syntrophaceticus
18
Syntrophobacter
7
3
Syntrophobotulus
6
1
Syntrophococcus
31
259
11
Syntrophomonas
3
178
52
Syntrophorhabdus
16
Syntrophothermus
17
1
Syntrophus
12
3
Taeniopygia
1
Taibaiella
1
26
Tamilnaduibacter
11
Tamlana
2
1
Tangfeifania
6
Tannerella
11
150
6
Tanticharoenia
1
Taonella
1
Tapinothrix
6
Tardiphaga
1
Tateyamaria
1
Tatumella
4
1
Taylorella
4
1
Telmatocola
1
Telmatospirillum
15
21
Temperatibacter
1
Tenacibaculum
3
30
Tenuibacillus
6
Tepidamorphus
1
Tepidanaerobacter
9
100
Tepidibacillus
31
Tepidibacter
63
76
Tepidimicrobium
162
1
20
Tepidimonas
13
18
1
Terasakiella
1
Terasakiispira
2
Teredinibacter
1
Terrabacter
1
Terracoccus
1
Terribacillus
13
1
4
Terriglobus
4
4
Terrimonas
19
Terrisporobacter
638
362
6
3
Tessaracoccus
24
78
1
Tetragenococcus
2
52
156
Tetrasphaera
10
Texcoconibacillus
68
Thalassococcus
3
Thalassolituus
1
Thalassomonas
7
Thalassospira
390
3
65
Thalassotalea
42
1
Thauera
35
40
Thermacetogenium
8
2
Thermaerobacter
18
4
Thermanaeromonas
1
3
Thermanaerothrix Gregoire et al. 2011
1
Thermanaerovibrio
1
1
Thermasporomyces
11
Thermicanus
1
216
206
Thermincola
1
13
3
Thermoactinomyces
90
7
Thermoanaerobacter
15
80
Thermoanaerobacterium
3
44
Thermoanaerobaculum
38
Thermobacillus
5
9
Thermobaculum
41
52
Thermobifida
1
Thermobispora
4
1
Thermoclostridium
4
Thermococcus
2
Thermocrinis
3
1
Thermodesulfatator
1
34
Thermodesulfobacterium
1
Thermodesulfobium
6
2
1
Thermodesulforhabdus
21
Thermodesulfovibrio
6
40
Thermoflexibacter
48
Thermogemmatispora
5
18
Thermogutta
10
1
Thermogymnomonas
11
Thermohalobacter
9
Thermohydrogenium
17
Thermoleophilum
19
Thermolithobacter
23
Thermolongibacillus
26
Thermomarinilinea
12
Thermomicrobium
1
Thermomonas
5
1
1
Thermomonospora
2
Thermonema
13
Thermophagus
33
Thermopolyspora
2
Thermosediminibacter
12
1
Thermosinus
1
Thermosipho
3
Thermosporothrix
2
Thermosulfidibacter
2
Thermosynechococcus
1
Thermosyntropha
3
Thermotoga
1
Thermotomaculum
5
Thermovenabulum
16
30
Thermovibrio
1
Thermovirga
3
Thermovorax
1
Thermus
15
44
Thioalbus
1
Thioalkalicoccus
5
Thioalkalimicrobium
1
36
29
Thioalkalispira
5
Thioalkalivibrio
20
38
Thiobacillus
1
20
37
Thiobacter
2
Thiocapsa
38
83
Thioclava
1
1
Thiococcus
1
Thiocystis
21
2
Thiofaba
1
Thioflavicoccus
1
Thiohalobacter
1
Thiohalocapsa
43
Thiohalomonas
3
Thiohalophilus
1
Thiohalorhabdus
66
127
Thiohalospira
5
Thiolamprovum
138
Thiolapillus
1
Thiomonas
1
111
66
Thiophaeococcus
6
Thioploca
4
Thioprofundum
5
Thioreductor
3
Thiorhodococcus
8
45
Thiorhodospira
2
8
Thiorhodovibrio
25
Thiothrix
1
38
174
Thiovirga
13
1
Thlaspi
1
Thorsellia
35
Tigriopus
1
Tilapia
1
Tindallia
58
229
Tissierella
40
Tistrella
22
1
Tolumonas
3
66
Tomitella
10
Tomopterna
1
Tonsilliphilus
1
4
Trabulsiella
40
Tranquillimonas
1
Traorella
1
Treponema
1
27
71
Trichococcus
6
7
14
Trichocoleus
2
Trichodesmium
19
Trichormus
1
Tropheryma
30
1
Truepera
1
11
Trueperella
7
8
4
Tsukamurella
1
2
27
Tuberibacillus
6
Tumebacillus
14
1
Tunicatimonas
22
Turicella
3
5
Turicibacter
504
282
10
199
Turneriella
5
Tychonema
126
Tyzzerella
444
36
6
Udeniomyces
1
Uliginosibacterium
47
30
Umboniibacter
1
unclassified Erysipelotrichaceae
4
unclassified Ruminococcaceae
4
Undibacterium
5
10
3
Ureaplasma
10
12
8
Ureibacillus
23
7
Ursidibacter
24
Vagococcus
9
23
102
Vallitalea
34
3
Vampirococcus
1
Vampirovibrio
10
1
Varibaculum
276
157
5
54
Variibacter
1
3
Variovorax
1
6
1
10
Veillonella
583
353
25
271
Verminephrobacter
14
1
Verrucomicrobium
36
1
Verrucosispora
2
1
Verticiella
2
Vibrio
31
15
Vibrio harveyi clade
3
Victivallis
301
152
7
1
Virgibacillus
1
17
25
Viridibacillus
11
33
Vitreoscilla
16
2
Vogesella
15
14
Volucribacter
13
1
Vulcanibacillus
3
Vulcaniibacterium
8
Vulcanithermus
6
Waddlia
1
Websdanea
1
Weeksella
3
1
Weissella
34
287
4
145
Wenyingzhuangia
2
3
Wenzhouxiangella
18
1
Wigglesworthia
4
Woeseia
1
Wohlfahrtiimonas
2
Wolbachia
6
Xanthobacter
2
3
1
Xanthomonas
1
11
11
Xenophilus
2
Xenorhabdus
113
4
Xuhuaishuia
1
Xylanimicrobium
1
Xylanimonas
1
Xylella
5
Xylophilus
2
Yangia
4
Yaniella
1
Yersinia
7
11
2
20
Youngiibacter
61
Youngimonas
4
Zeaxanthinibacter
2
Zhihengliuella
1
2
Zhongshania
23
1
Zhouia
2
Zobellella
36
3
Zobellia
1
4
Zoogloea
2
7
Zopfius
2
Zymobacter
26
kingdom
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Zymomonas
1
1
Chlorobionta
21
Fungi
2
no rank
Name
uBiome
Thryve
SequentiaBioTech
XenoGene
Others
Not yet classified (Prokaryotae)
226
[Clostridium] aminophilum DSM 10710
1
[Clostridium] bolteae 90A9
1
[Clostridium] cf. saccharolyticum K10
1
[Clostridium] citroniae WAL-17108
4
[Clostridium] clostridioforme 90A7
2
[Clostridium] clostridioforme 90A8
3
[Clostridium] clostridioforme CM201
1
[Clostridium] innocuum 2959
5
[Clostridium] saccharogumia DSM 17460
4
[Clostridium] sphenoides JCM 1415
3
[Clostridium] spiroforme DSM 1552
1
[Clostridium] symbiosum ATCC 14940
1
[Clostridium] symbiosum WAL-14163
2
3
[Clostridium] ultunense Esp
1
[Eubacterium] cellulosolvens 6
1
[Eubacterium] siraeum DSM 15702
1
Abiotrophia defectiva ATCC 49176
1
Absiella dolichum ATCC 29143
3
Acetobacterium sp. KB-1
1
Acinetobacter lwoffii WJ10621
1
Acinetobacter venetianus VE-C3
1
Actinobaculum sp. oral taxon 183 str. F0552
2
Actinomyces dentalis DSM 19115
1
Actinomyces gerencseriae DSM 6844
1
Actinomyces graevenitzii F0530
3
Actinomyces johnsonii F0542
1
Actinomyces massiliensis 4401292
1
Actinomyces naeslundii Howell 279
2
Actinomyces oris K20
1
Actinoplanes teichomyceticus ATCC 31121
1
Aeromicrobium marinum DSM 15272
1
Aeromonas caviae Ae398
1
Aeromonas hydrophila 4AK4
1
Aeromonas salmonicida subsp. pectinolytica 34mel
1
Agathobaculum desmolans ATCC 43058
4
Aggregatibacter sp. oral taxon 458 str. W10330
1
Alcaligenaceae bacterium YIT 11859
5
Aliivibrio fischeri SR5
1
Alistipes onderdonkii DSM 19147
5
Alistipes putredinis DSM 17216
5
Alistipes senegalensis JC50
4
Alistipes sp. JC136
4
Alloscardovia omnicolens F0580
1
Alteromonadales genera incertae sedis
1
Anabaena
1
Anaerostipes hadrus DSM 3319
1
Aneurinibacillus group
3
1
Angiospermae
21
Anoxybacillus kamchatkensis G10
1
ant endosymbionts
4
ant, tsetse, mealybug, aphid, etc. endosymbionts
1
1
aphid secondary symbionts
1
Aquiflexum balticum DSM 16537
1
Arcobacter cryaerophilus D2610
1
Arcobacter group
4
Arcobacter skirrowii CCUG 10374
1
ATCC 35035
2
ATCC 51140
2
Auraticoccus monumenti
1
1
Bacillales Family XI. Incertae Sedis
208
237
Bacillales Family XII. Incertae Sedis
3
8
Bacillales incertae sedis
212
210
Bacillus amyloliquefaciens UMAF6639
1
Bacillus atrophaeus UCMB-5137
1
Bacillus cereus AH676
1
Bacillus cereus ATCC 4342
1
Bacillus cereus F
1
Bacillus cereus F65185
1
Bacillus cereus m1293
1
Bacillus cereus Rock3-44
1
Bacillus cereus Rock4-18
1
Bacillus cereus Rock4-2
1
Bacillus jeotgali
1
Bacillus megaterium NCT-2
1
Bacillus megaterium Q3
1
Bacillus simplex NBRC 15720 = DSM 1321
1
Bacillus thuringiensis LM1212
1
Bacillus thuringiensis serovar andalousiensis
1
Bacillus thuringiensis serovar andalousiensis BGSC 4AW1
1
Bacillus thuringiensis serovar huazhongensis
1
Bacillus thuringiensis serovar huazhongensis BGSC 4BD1
1
Bacteria candidate phyla
170
bacterium 84634
6
Bacteroides acidifaciens JCM 10556
5
Bacteroides caccae CL03T12C61
3
Bacteroides cellulosilyticus CL02T12C19
2
Bacteroides chinchillae JCM 16497
4
Bacteroides clarus DSM 22519
2
Bacteroides dorei 5_1_36/D4
1
Bacteroides faecis JCM 16478
3
Bacteroides fluxus DSM 22534
2
Bacteroides fragilis str. 3397 T10
3
Bacteroides fragilis str. 3976T8
1
Bacteroides gallinarum DSM 18171
1
Bacteroides intestinalis 341
1
2
Bacteroides oleiciplenus DSM 22535
2
Bacteroides ovatus 3_8_47FAA
1
Bacteroides ovatus CL02T12C04
1
1
Bacteroides ovatus CL03T12C18
1
Bacteroides rodentium JCM 16496
4
Bacteroides salyersiae CL02T12C01
2
Bacteroides sartorii A-C2-0
1
Bacteroides sp. AP1
2
Bacteroides sp. CC31F
2
Bacteroides sp. JCM 17103
1
Bacteroides uniformis CL03T12C37
1
Bacteroides uniformis str. 3978 T3 i
1
Bacteroides vulgatus str. 3775 SL(B) 10 (iv)
1
Bacteroides vulgatus str. 3975 RP4
2
Bacteroides xylanisolvens CL03T12C04
2
Barnesiella intestinihominis str. YIT 11860
1
2
Bifidobacterium adolescentis JCM 15918
2
Bifidobacterium breve HPH0326
2
Bifidobacterium longum subsp. longum 2-2B
1
Bifidobacterium longum subsp. longum ATCC 55813
1
Bifidobacterium pseudocatenulatum IPLA36007
2
Bifidobacterium saeculare DSM 6531
3
Bilophila wadsworthia ATCC 49260
2
biota
858
Blattabacterium cuenoti BPAY
1
Blattabacterium cuenoti STAT
1
Blautia obeum ATCC 29174
6
Blautia producta ATCC 27340
2
Blautia schinkii DSM 10518
2
Blautia wexlerae DSM 19850
6
Borrelia coriaceae Co53
1
Borrelia crocidurae DOU
1
Borrelia hermsii YBT
1
Borreliella valaisiana VS116
1
Bovine herpesvirus type 2 (strain BHM-1)
1
Brevibacillus brevis X23
1
Brevibacillus laterosporus DSM 25
1
Brevibacterium massiliense 5401308
1
Brevibacterium mcbrellneri ATCC 49030
1
Buchnera aphidicola (Acyrthosiphon kondoi)
1
Buchnera aphidicola (Acyrthosiphon pisum)
2
Buchnera aphidicola (Cinara cedri)
1
Buchnera aphidicola (Cinara confinis)
1
Buchnera aphidicola (Cinara pseudotaxifoliae)
1
Buchnera aphidicola (Diuraphis noxia)
1
Buchnera aphidicola (Schizaphis graminum)
1
Buchnera aphidicola (Schlechtendalia chinensis)
1
Buchnera aphidicola (Tuberolachnus salignus)
1
Buchnera aphidicola (Uroleucon ambrosiae)
1
Bunyavirus la crosse
1
Burkholderiales Genera incertae sedis
22
4
Butyricicoccus pullicaecorum 1.2
4
Butyricimonas virosa DSM 23226
2
Calditrichae
62
Calothrix brevissima NIES-22
1
Calothrix parasitica NIES-267
1
Campylobacter sputorum biovar sputorum
1
Campylobacter sputorum bv. sputorum RM3237
1
Candidatus Accumulibacter
1
Candidatus Uzinura
1
Canine adenovirus 2
1
Capnocytophaga sp. ChDC OS43
1
Catenibacterium mitsuokai DSM 15897
1
Catonella morbi ATCC 51271
1
Chlamydia/Chlamydophila group
1
Chlamydiae/Verrucomicrobia group
336
Chlorobium/Pelodictyon group
1
Chromobacterium group
4
Chromophyta
2
Clostridioides difficile F501
4
Clostridioides difficile M120
1
Clostridioides difficile P28
2
Clostridioides difficile QCD-37x79
1
Clostridioides difficile QCD-63q42
1
Clostridioides difficile QCD-76w55
1
Clostridium beijerinckii NRRL B-598
1
Clostridium botulinum B
1
4
Clostridium botulinum CDC_1436
1
Clostridium botulinum F
1
Clostridium celatum DSM 1785
2
Clostridium glycolicum ATCC 14880
1
Clostridium hathewayi 12489931
1
Clostridium hathewayi DSM 13479
4
Clostridium nexile ATCC 27757
6
Clostridium orbiscindens 1_3_50AFAA
5
Clostridium paraputrificum AGR2156
2
Clostridium perfringens F262
1
Clostridium ramosum DSM 1402
2
Clostridium sp. DL-VIII
2
Collinsella intestinalis DSM 13280
2
Collinsella sp. YIT 12063
2
Collinsella stercoris DSM 13279
2
Corallococcus
2
core eudicots
21
Coriobacteriaceae bacterium B7
3
Coriobacteriaceae bacterium JC110
4
3
Coriobacteriaceae bacterium phI
1
Corynebacterium accolens ATCC 49725
1
Corynebacterium durum F0235
2
Cyanobacteria/Melainabacteria group
17
Dactylococcopsis
1
Desulfobacula toluolica
1
Desulfosporosinus youngiae DSM 17734
1
Dethiobacter alkaliphilus AHT 1
1
Dialister sp. YIT 11850
3
Dickeya paradisiaca NCPPB 2511
1
Dickeya zeae MK19
1
dicots
21
Dolichospermum compactum NIES-806
1
Dorea formicigenerans ATCC 27755
6
Dorea longicatena AGR2136
3
Eggerthella lenta 1_1_60AFAA
1
Embryophyta
21
Empedobacter brevis NBRC 14943 = ATCC 43319
1
Endozoicomonas montiporae CL-33
1
Enterobacter asburiae LF7a
1
Enterococcus avium ATCC 14025
1
Enterococcus faecalis EnGen0285
1
Enterococcus faecium E4453
3
Enterorhabdus mucosicola DSM 19490
2
environmental samples
1
1
Erysipelotrichaceae bacterium GAM147
2
Escherichia coli HVH 175 (4-3405184)
1
Escherichia coli O15:H11
1
Escherichia coli O157
1
Escherichia coli O55:H7
1
Escherichia coli STEC_DG131-3
1
euasterids I
21
Eubacterium brachy ATCC 33089
1
Eubacterium cylindroides ATCC 27803
3
Eubacterium limosum KIST612
1
Eubacterium plautii ATCC 29863
1
Eubacterium ramulus ATCC 29099
6
Euphyllophyta
21
Eutheria
1
Faecalicoccus pleomorphus ATCC 29734
1
FCB group
486
Flavisolibacter sp. 17J28-1
2
Fluoribacter dumoffii NY 23
1
Formosa agariphila KMM 3901
1
Fremyella diplosiphon NIES-3275
2
Fungi/Metazoa group
2
Fusobacterium hwasookii ChDC F206
1
Fusobacterium nucleatum subsp. animalis 21_1A
1
Gemella sanguinis M325
1
Geminocystis herdmanii PCC 6308
1
Geobacter daltonii
1
Granulicatella adiacens ATCC 49175
2
H11N8 subtype
1
Haemophilus haemolyticus M19107
1
Haemophilus influenzae PittAA
1
Haemophilus parahaemolyticus G321
1
Haemophilus paraphrohaemolyticus HK411
1
Haemophilus pittmaniae CCUG 48703
1
Haloplasma contractile SSD-17B
1
Herpes simplex virus (type 1 / strain A44)
1
HIV-1 M:CRF02 233Hald
1
Hoeflea phototrophica DFL-43
1
Holdemania filiformis DSM 12042
5
Holdemania massiliensis AP2
2
Human papillomavirus unidentified type (RTRX1)
1
IFM 1018
2
Igbo Ora virus
1
Immundisolibacterales
2
Influenza A virus (A/Bangkok(H3N2))
1
Influenza A virus (A/China/C1-8/2002(H3N2))
1
Influenza A virus (A/duck/Hunan/344/2006(H5N1))
1
Influenza A virus (A/northern shoveler/Alaska/17/2007(H3N8))
1
Influenza A virus (A/pigeon/Rostov-on-Don/6/07(H5N1))
1
Influenza A virus (A/Shiga/2/91(H3N2))
1
Influenza B virus (B/New York/02/2007)
1
Influenza B virus (B/Oregon/01/2007)
1
Influenza B virus (B/Pennsylvania/06/2007)
1
Jonquetella anthropi DSM 22815
1
Klebsiella oxytoca G54
1
Klebsiella quasipneumoniae subsp. similipneumoniae MGH 44
1
Klebsiella variicola MGH 80
1
Komagataeibacter hansenii ATCC 23769
1
Kosakonia radicincitans DSM 16656
1
Labrenzia alexandrii DFL-11
1
Lachnospiraceae bacterium oral taxon 082 str. F0431
1
Lactobacillales incertae sedis
52
Lactobacillus amylovorus DSM 20531
1
Lactobacillus casei subsp. casei ATCC 393
1
Lactobacillus gasseri 202-4
1
Lactobacillus gasseri DSM 14869
1
Lactobacillus salivarius str. Ren
1
Leadbetterella
9
1
Leptospira biflexa serovar Patoc
1
Leptospira interrogans serovar Copenhageni/Icterohaemorrhagiae
1
Leptospira interrogans serovar Linhai
1
Leptospira interrogans serovar Manilae
1
lice endosymbionts
1
Listeria monocytogenes FSL J1-208
1
Mastadenovirus 1
1
mealybug secondary endosymbionts
1
Megamonas funiformis YIT 11815
1
Megasphaera elsdenii 14-14
1
Mesangiospermae
21
Mesorhizobium ciceri biovar biserrulae
1
Mesorhizobium ciceri ca181
1
Methanobrevibacter smithii DSM 2375
1
methanotroph E10
1
Methylacidiphilum fumariolicum SolV
1
Microcystis aeruginosa PCC 7806
1
Microcystis aeruginosa PCC 7806SL
1
Mitsuokella jalaludinii DSM 13811
1
Mobiluncus/Falcivibrio group
51
Moorella group
4
Mycetocola
1
Mycobacterium canettii
1
Mycoplasma gallisepticum str. R
1
Mycoplasma mycoides subsp. capri LC
1
Myroides odoratus DSM 2801
1
Myxococcus fulvus 124B02
1
Mzabimycetaceae
1
Negativicoccus succinicivorans DORA_17_25
2
Neorhizobium galegae bv. officinalis
1
Nitrosospira briensis C-128
1
Nodularia spumigena CCY9414
1
Nonlabens
7
2
Nonlabens marinus S1-08
1
Norovirus noodle salad/Stuttgart21334/2006/DEU
1
Nostoc carneum NIES-2107
1
Nostoc linckia NIES-25
1
Oceanobacillus kimchii X50
1
Odoribacter laneus JCM 16069
2
Oenococcus kitaharae DSM 17330
1
oligotrophic marine Gammaproteobacteria group
1
OM182 clade
1
Oscillibacter ruminantium GH1
2
Paenibacillus durus ATCC 35681
1
Parabacteroides distasonis CL03T12C09
1
Parabacteroides distasonis str. 3776 D15 iv
1
Parabacteroides distasonis str. 3999B T(B) 4
1
Parabacteroides distasonis str. 3999B T(B) 6
1
Parabacteroides johnsonii CL02T12C29
1
Parabacteroides merdae CL03T12C32
1
Parabasalia
1
Paraprevotella clara str. YIT 11840
3
Pasteurella multocida subsp. multocida P1062
1
Pediococcus acidilactici 7_4
1
Peptoniphilus lacrimalis DNF00528
1
Peptostreptococcus anaerobius DSM 2949
1
Planktothrix agardhii
1
Plasmodium cynomolgi (strain Ceylon)
1
Plasmodium cynomolgi (strain London)
1
Plasmodium falciparum (isolate mad20 / papua new guinea)
1
Plasmodium falciparum (isolate TAK 9)
1
Porphyromonas somerae DSM 23386
2
Porphyromonas uenonis DSM 23387
2
Prevotella bivia DNF00650
1
Prevotella scopos JCM 17725
2
Prevotella sp. 4401737
2
Prevotella stercorea DSM 18206
2
1
primary endosymbiont of Heteropsylla cubana
1
Providencia sneebia DSM 19967
1
Pseudomonas amygdali pv. tabaci
1
Pseudomonas fluorescens NCIMB 11764
1
Pseudomonas fluorescens Q2-87
1
Pseudomonas fluorescens R124
1
Pseudomonas fluorescens WH6
1
Pseudomonas moraviensis R28-S
1