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Citizen Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a symptom. There are many bacteria involved. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is based on associations discovered from annotated 16s microbiome samples. See this post for more information.

SymptomImpactPredictor of Bacteria Shift
Autonomic Manifestations: cardiac arrhythmiasWorsen3.5
DePaul University Fatigue Questionnaire : AllergiesImproves-2.8
DePaul University Fatigue Questionnaire : Anxiety/tensionImproves-2.8
DePaul University Fatigue Questionnaire : DepressionImproves-2.8
DePaul University Fatigue Questionnaire : Difficulty finding the right wordImproves-2.8
DePaul University Fatigue Questionnaire : FatigueImproves-2.8
DePaul University Fatigue Questionnaire : Forgetting what you are trying to sayImproves-2.8
DePaul University Fatigue Questionnaire : Walking up early in the morning (e.g. 3AM)Improves-2.8

Published Science Infered Impact

We take what shifts this modifier is known to make and the shifts reported for a medical condition. There are many bacteria. We sum all of the shifts (some positive and some negative) to estimate a predictor. Some bacteria may have greater impact (that information is not available in 99% of studies) so the estimate can be wrong in edge cases.

This is according to the microbiome shifts reported in studies. Clinical studies may show different results

SymptomImpactPredictor of Bacteria Shift
AcneWorsen0
ADHDWorsen2.72
Allergic Rhinitis (Hay Fever)Worsen2.72
AllergiesWorsen3.42
Amyotrophic lateral sclerosis (ALS) Motor NeuronImproves-3.38
Ankylosing spondylitisImproves-2.76
Anorexia NervosaImproves-2.85
AsthmaWorsen2.8
AtherosclerosisImproves-4.58
AutismWorsen4.14
Barrett esophagus cancerWorsen2.62
Brain TraumaWorsen2.72
CarcinomaImproves-2.83
Celiac DiseaseWorsen0.21
Cerebral PalsyImproves-2.83
Chronic Fatigue SyndromeWorsen2.6
Chronic Kidney DiseaseWorsen2.72
Chronic Urticaria (Hives)Improves-2.83
Colorectal CancerImproves-1.13
COVID-19Improves-2.83
Crohn's DiseaseWorsen0
DepressionImproves-2.92
EczemaWorsen4.1
EpilepsyImproves-1.02
FibromyalgiaWorsen2.72
gallstone disease (gsd)Improves-2.8
Gastroesophageal reflux disease (Gerd) including Barrett's esophagusWorsen3.56
Hashimoto's thyroiditisWorsen2.8
High Blood PressureWorsen2.72
Histamine IssuesImproves-2.1
Histamine Issues From UbiomeWorsen2.72
hypercholesterolemia (High Cholesterol)Worsen2.39
Hyperlipidemia (High Blood Fats)Worsen3.42
IgA nephropathy (IgAN)Worsen2.72
Inflammatory Bowel DiseaseImproves-4.16
Irritable Bowel SyndromeWorsen3.38
Liver CirrhosisImproves-4.35
ME/CFS with IBSImproves-3.5
ME/CFS without IBSImproves-3.5
Multiple SclerosisImproves-4.32
Multiple system atrophy (MSA)Improves-2.72
Nonalcoholic Fatty Liver Disease (nafld) NonalcoholicImproves-4.41
ObesityImproves-3.51
OsteoarthritisImproves-2.83
OsteoporosisImproves-2.72
Parkinson's DiseaseImproves-3.7
PsoriasisImproves-3.85
rheumatoid arthritis (RA),Spondyloarthritis (SpA)Worsen3.81
RosaceaWorsen2.72
SchizophreniaImproves-3.82
Sjögren syndromeImproves-3.5
Small Intestinal Bacterial Overgrowth (SIBO)Improves-2.83
Stress / posttraumatic stress disorderImproves-2.72
Systemic Lupus ErythematosusImproves-1.18
Type 1 DiabetesWorsen4.09
Type 2 DiabetesImproves-2.26
Ulcerative colitisImproves-2.95

Bacteria Impacted

We extend modifiers to include items that changes the parent and child taxa. I.e. for a species, that would be the genus that is belongs to and the strains in the species.

📓 - direct citation | 👪 - Impacts Parent Taxa | 👶 - Impacts Child Taxa | 🧙 - Inferred
Taxonomy Rank Effect Citations
Lactobacillaceae family Decreases 📓 Source Study
Streptococcaceae family Decreases 📓 Source Study
Lactobacillus genus Decreases 📓 Source Study
Streptococcus genus Decreases 📓 Source Study
Lactovum genus Decreases 👪 Source Study
Pediococcus genus Decreases 👪 Source Study
Sharpea genus Decreases 👪 Source Study
[Clostridium] symbiosum species Decreases 📓 Source Study
Lactobacillus casei group species Decreases 📓 Source Study
Lactobacillus rhamnosus species Decreases 📓 Source Study
NBRC 15891 species Decreases 📓 Source Study
Streptococcus sobrinus species Decreases 📓 Source Study
Streptococcus sp. 11aTha1 species Decreases 📓 Source Study
Streptococcus sp. 2011_Ileo_MS_A10 species Decreases 📓 Source Study
Streptococcus sp. 2011_Oral_MS_A3 species Decreases 📓 Source Study
Streptococcus sp. 2011_Oral_MS_E1 species Decreases 📓 Source Study
Streptococcus sp. 3244O2 species Decreases 📓 Source Study
Streptococcus sp. BS35a species Decreases 📓 Source Study
Streptococcus sp. F0442 species Decreases 📓 Source Study
Streptococcus sp. GMD6S species Decreases 📓 Source Study
Streptococcus sp. oral taxon G59 species Decreases 📓 Source Study
Streptococcus sp. oral taxon G63 species Decreases 📓 Source Study
Streptococcus sp. S16-11 species Decreases 📓 Source Study
Streptococcus sp. TM013 species Decreases 📓 Source Study
Streptococcus thermophilus species Decreases 📓 Source Study
ATCC 43138 species Decreases 👪 Source Study
ATCC 700934 species Decreases 👪 Source Study
BCRC 17755 species Decreases 👪 Source Study
CCUG 46149 species Decreases 👪 Source Study
CCUG 48363 species Decreases 👪 Source Study
CCUG 48460 species Decreases 👪 Source Study
CCUG 55896 species Decreases 👪 Source Study
CCUG 63301 species Decreases 👪 Source Study
CCUG 63631 species Decreases 👪 Source Study
CGMCC 1.15531 species Decreases 👪 Source Study
CGMCC 1.15532 species Decreases 👪 Source Study
CGMCC 1.15533 species Decreases 👪 Source Study
CGMCC 1.15534 species Decreases 👪 Source Study
CGMCC 1.15667 species Decreases 👪 Source Study
CRBIP 24.179 species Decreases 👪 Source Study
DSM 104980 species Decreases 👪 Source Study
DSM 18963 species Decreases 👪 Source Study
DSM 19284 species Decreases 👪 Source Study
DSM 26920 species Decreases 👪 Source Study
Eubacterium uniforme species Decreases 👪 Source Study
JCM 1039 species Decreases 👪 Source Study
JCM 32269 species Decreases 👪 Source Study
Lactobacillus acetotolerans species Decreases 👪 Source Study
Lactobacillus acidipiscis species Decreases 👪 Source Study
Lactobacillus agilis species Decreases 👪 Source Study
Lactobacillus alimentarius species Decreases 👪 Source Study
Lactobacillus allii species Decreases 👪 Source Study
Lactobacillus amylolyticus species Decreases 👪 Source Study
Lactobacillus animalis species Decreases 👪 Source Study
Lactobacillus antri species Decreases 👪 Source Study
Lactobacillus apis species Decreases 👪 Source Study
Lactobacillus backii species Decreases 👪 Source Study
Lactobacillus bifermentans species Decreases 👪 Source Study
Lactobacillus bombi species Decreases 👪 Source Study
Lactobacillus brantae species Decreases 👪 Source Study
Lactobacillus buchneri species Decreases 👪 Source Study
Lactobacillus casei species Decreases 👪 Source Study
Lactobacillus ceti species Decreases 👪 Source Study
Lactobacillus coleohominis species Decreases 👪 Source Study
Lactobacillus composti species Decreases 👪 Source Study
Lactobacillus coryniformis species Decreases 👪 Source Study
Lactobacillus crustorum species Decreases 👪 Source Study
Lactobacillus curieae species Decreases 👪 Source Study
Lactobacillus equi species Decreases 👪 Source Study
Lactobacillus equigenerosi species Decreases 👪 Source Study
Lactobacillus farciminis species Decreases 👪 Source Study
Lactobacillus fermentum species Decreases 👪 Source Study
Lactobacillus floricola species Decreases 👪 Source Study
Lactobacillus frumenti species Decreases 👪 Source Study
Lactobacillus fuchuensis species Decreases 👪 Source Study
Lactobacillus gallinarum species Decreases 👪 Source Study
Lactobacillus ginsenosidimutans species Decreases 👪 Source Study
Lactobacillus hamsteri species Decreases 👪 Source Study
Lactobacillus harbinensis species Decreases 👪 Source Study
Lactobacillus hayakitensis species Decreases 👪 Source Study
Lactobacillus heilongjiangensis species Decreases 👪 Source Study
Lactobacillus helveticus species Decreases 👪 Source Study
Lactobacillus hilgardii species Decreases 👪 Source Study
Lactobacillus hokkaidonensis species Decreases 👪 Source Study
Lactobacillus ingluviei species Decreases 👪 Source Study
Lactobacillus intestinalis species Decreases 👪 Source Study
Lactobacillus jensenii species Decreases 👪 Source Study
Lactobacillus johnsonii species Decreases 👪 Source Study
Lactobacillus kalixensis species Decreases 👪 Source Study
Lactobacillus kefiranofaciens species Decreases 👪 Source Study
Lactobacillus kefiri species Decreases 👪 Source Study
Lactobacillus kunkeei species Decreases 👪 Source Study
Lactobacillus lindneri species Decreases 👪 Source Study
Lactobacillus malefermentans species Decreases 👪 Source Study
Lactobacillus mali species Decreases 👪 Source Study
Lactobacillus mellifer species Decreases 👪 Source Study
Lactobacillus mellis species Decreases 👪 Source Study
Lactobacillus murinus species Decreases 👪 Source Study
Lactobacillus namurensis species Decreases 👪 Source Study
Lactobacillus nodensis species Decreases 👪 Source Study
Lactobacillus oligofermentans species Decreases 👪 Source Study
Lactobacillus oris species Decreases 👪 Source Study
Lactobacillus oryzae species Decreases 👪 Source Study
Lactobacillus ozensis species Decreases 👪 Source Study
Lactobacillus pantheris species Decreases 👪 Source Study
Lactobacillus parabuchneri species Decreases 👪 Source Study
Lactobacillus paracollinoides species Decreases 👪 Source Study
Lactobacillus parafarraginis species Decreases 👪 Source Study
Lactobacillus paralimentarius species Decreases 👪 Source Study
Lactobacillus paraplantarum species Decreases 👪 Source Study
Lactobacillus pentosus species Decreases 👪 Source Study
Lactobacillus perolens species Decreases 👪 Source Study
Lactobacillus plajomi species Decreases 👪 Source Study
Lactobacillus pontis species Decreases 👪 Source Study
Lactobacillus psittaci species Decreases 👪 Source Study
Lactobacillus rapi species Decreases 👪 Source Study
Lactobacillus rodentium species Decreases 👪 Source Study
Lactobacillus sakei species Decreases 👪 Source Study
Lactobacillus saniviri species Decreases 👪 Source Study
Lactobacillus satsumensis species Decreases 👪 Source Study
Lactobacillus selangorensis species Decreases 👪 Source Study
Lactobacillus songhuajiangensis species Decreases 👪 Source Study
Lactobacillus sp. species Decreases 👪 Source Study
Lactobacillus sp. 7_1_47FAA species Decreases 👪 Source Study
Lactobacillus sp. Akhmro1 species Decreases 👪 Source Study
Lactobacillus sp. BHWM-4 species Decreases 👪 Source Study
Lactobacillus sp. C30An8 species Decreases 👪 Source Study
Lactobacillus sp. C4I1 species Decreases 👪 Source Study
Lactobacillus sp. C4I18 species Decreases 👪 Source Study
Lactobacillus sp. CBA3606 species Decreases 👪 Source Study
Lactobacillus sp. H7_2_4MCO2 species Decreases 👪 Source Study
Lactobacillus sp. H7_6_6MCO2 species Decreases 👪 Source Study
Lactobacillus sp. HBUAS52074 species Decreases 👪 Source Study
Lactobacillus sp. HSLZ-75 species Decreases 👪 Source Study
Lactobacillus sp. MYMRS/TEN2 species Decreases 👪 Source Study
Lactobacillus sp. NRCT-KU 1 species Decreases 👪 Source Study
Lactobacillus sp. S16 species Decreases 👪 Source Study
Lactobacillus sp. T059 species Decreases 👪 Source Study
Lactobacillus sp. TAB-22 species Decreases 👪 Source Study
Lactobacillus sp. TAB-29 species Decreases 👪 Source Study
Lactobacillus tucceti species Decreases 👪 Source Study
Lactobacillus vaccinostercus species Decreases 👪 Source Study
Lactobacillus vaginalis species Decreases 👪 Source Study
Lactobacillus vini species Decreases 👪 Source Study
Lactobacillus zymae species Decreases 👪 Source Study
LMG:9496 species Decreases 👪 Source Study
Streptococcus acidominimus species Decreases 👪 Source Study
Streptococcus anginosus group species Decreases 👪 Source Study
Streptococcus canis species Decreases 👪 Source Study
Streptococcus cristatus species Decreases 👪 Source Study
Streptococcus danieliae species Decreases 👪 Source Study
Streptococcus dentapri species Decreases 👪 Source Study
Streptococcus dentasini species Decreases 👪 Source Study
Streptococcus didelphis species Decreases 👪 Source Study
Streptococcus entericus species Decreases 👪 Source Study
Streptococcus G418 species Decreases 👪 Source Study
Streptococcus gallolyticus species Decreases 👪 Source Study
Streptococcus hyointestinalis species Decreases 👪 Source Study
Streptococcus hyovaginalis species Decreases 👪 Source Study
Streptococcus infantarius species Decreases 👪 Source Study
Streptococcus infantis species Decreases 👪 Source Study
Streptococcus iniae species Decreases 👪 Source Study
Streptococcus marimammalium species Decreases 👪 Source Study
Streptococcus massiliensis species Decreases 👪 Source Study
Streptococcus merionis species Decreases 👪 Source Study
Streptococcus milleri species Decreases 👪 Source Study
Streptococcus mitis species Decreases 👪 Source Study
Streptococcus oralis species Decreases 👪 Source Study
Streptococcus orisasini species Decreases 👪 Source Study
Streptococcus orisratti species Decreases 👪 Source Study
Streptococcus parauberis species Decreases 👪 Source Study
Streptococcus pharyngis species Decreases 👪 Source Study
Streptococcus phocae species Decreases 👪 Source Study
Streptococcus pluranimalium species Decreases 👪 Source Study
Streptococcus plurextorum species Decreases 👪 Source Study
Streptococcus porcorum species Decreases 👪 Source Study
Streptococcus pseudopneumoniae species Decreases 👪 Source Study
Streptococcus pseudoporcinus species Decreases 👪 Source Study
Streptococcus rupicaprae species Decreases 👪 Source Study
Streptococcus sanguinis species Decreases 👪 Source Study
Streptococcus seminale species Decreases 👪 Source Study
Streptococcus sobrinus species Decreases 👪 Source Study
Streptococcus sp. 2_1_36FAA species Decreases 👪 Source Study
Streptococcus sp. 2011_Ileo_MS_A12 species Decreases 👪 Source Study
Streptococcus sp. 2011_Ileo_MS_C3 species Decreases 👪 Source Study
Streptococcus sp. 2011_Oral_MS_B3 species Decreases 👪 Source Study
Streptococcus sp. 2011_Oral_MS_D12 species Decreases 👪 Source Study
Streptococcus sp. 2011_Oral_MS_E1 species Decreases 👪 Source Study
Streptococcus sp. A12 species Decreases 👪 Source Study
Streptococcus sp. AS14 species Decreases 👪 Source Study
Streptococcus sp. BS35b species Decreases 👪 Source Study
Streptococcus sp. canine oral taxon 279 species Decreases 👪 Source Study
Streptococcus sp. F0441 species Decreases 👪 Source Study
Streptococcus sp. F0442 species Decreases 👪 Source Study
Streptococcus sp. FDAARGOS_192 species Decreases 👪 Source Study
Streptococcus sp. HPA1 species Decreases 👪 Source Study
Streptococcus sp. HPH0090 species Decreases 👪 Source Study
Streptococcus sp. HSISB1 species Decreases 👪 Source Study
Streptococcus sp. HSISM1 species Decreases 👪 Source Study
Streptococcus sp. HSISS1 species Decreases 👪 Source Study
Streptococcus sp. HSISS2 species Decreases 👪 Source Study
Streptococcus sp. I-G2 species Decreases 👪 Source Study
Streptococcus sp. JS71 species Decreases 👪 Source Study
Streptococcus sp. M143 species Decreases 👪 Source Study
Streptococcus sp. NPS 308 species Decreases 👪 Source Study
Streptococcus sp. oral taxon 064 species Decreases 👪 Source Study
Streptococcus sp. oral taxon 071 species Decreases 👪 Source Study
Streptococcus sp. oral taxon 431 species Decreases 👪 Source Study
Streptococcus sp. oral taxon G62 species Decreases 👪 Source Study
Streptococcus sp. oral taxon G63 species Decreases 👪 Source Study
Streptococcus sp. S16-08 species Decreases 👪 Source Study
Streptococcus sp. TM013 species Decreases 👪 Source Study
Streptococcus sp. Z15 species Decreases 👪 Source Study
Streptococcus suis species Decreases 👪 Source Study
Streptococcus troglodytae species Decreases 👪 Source Study
Streptococcus troglodytidis species Decreases 👪 Source Study
Streptococcus uberis species Decreases 👪 Source Study
Streptococcus urinalis species Decreases 👪 Source Study
Streptococcus vestibularis species Decreases 👪 Source Study
Streptococcus viridans species Decreases 👪 Source Study

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This is an Academic site. It generates theoretical models of what may benefit a specific microbiome results.