Oxalobacter vibrioformis Details: NCBI 933080, gram-negative or unknown [species]
| DSM 5502| Oxalobacter vibrioformis| Oxalobacter vibrioformis Dehning and Schink 1990| strain WoOx3
Oxalate Metabolism: Oxalobacter vibrioformis is known to metabolize oxalate, converting it into formate and carbon dioxide. This metabolic activity may contribute to the regulation of oxalate levels in the gastrointestinal tract.
Potential Role in Kidney Stone Prevention: Oxalate is a key component of kidney stones. Some studies suggest that Oxalobacter species, including O. formigenes (closely related to O. vibrioformis), may play a role in reducing the risk of kidney stone formation by promoting the breakdown of oxalate in the gut. However, the specific impact of O. vibrioformis in this regard requires further research.
Association with Human Health: The relationship between Oxalobacter species and human health is an area of ongoing research. While some studies suggest a potential association between reduced levels of Oxalobacter and an increased risk of kidney stone formation, the evidence is not conclusive, and more research is needed.
Implications for Oxalate Absorption: Oxalobacter vibrioformis may influence the absorption of dietary oxalate in the intestine, potentially impacting the amount of oxalate that reaches the kidneys. This, in turn, could have implications for individuals prone to kidney stone formation.
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Other Sources for more information:
- Immune Epitope Database
- The NCBI taxonomy database
- UniProt
- Immune Epitope Taxonomy Database (IEDB)
- AI Engines For more Details: Perplexity Kagi Labs You
 Statistics
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NCBI | Data Punk | End Products Produced |
Lab Reporting
Different labs use different software to read the sample. See this post for more details.
One lab may say you have none, another may say you have a lot! - This may be solely due to the software they are using to estimate.
We deem lab specific values using values from the KM method for each specific lab to be the most reliable.
Desired Levels Suggestions for Oxalobacter vibrioformis
- Frequency - how often do samples show this bacteria
- UD - An alternative statistical algorithm (which factors in the frequency)
- Kaltoft-Moldrup Heuristic Using uploaded data
- Lab Low and High are calculated using the formula that most labs use: Mean - 2 Standard Deviation to Mean + 2 Standard Deviation
| Lab | Frequency | UD-Low | UD-High | KM Low | KM High | Lab Low | Lab High | Mean | Median | Standard Deviation | Box Plot Low | Box Plot High | KM Percentile Low | KM Percentile High |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Other Labs | 0.22 | 1 | 593 | 0 | 638 | 126.4 | 13 | 260.9 | 1 | 593 | 14.3 %ile | 71.4 %ile | ||
| biomesight | 26.15 | 0 | 20 | 20 | 110 | 0 | 189 | 64.5 | 40 | 63.5 | 0 | 120 | 8 %ile | 92 %ile |
| thryve | 0.63 | 1 | 77 | 0 | 84 | 27.6 | 19 | 28.9 | 1 | 77 | 11.1 %ile | 77.8 %ile |
External Reference Ranges for Oxalobacter vibrioformis
| Source of Ranges | Low Boundary | High Boundary | Low Boundary %age | High Boundary %age |
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Statistic by Lab Source for Oxalobacter vibrioformis
| Lab | Frequency Seen | Average | Standard Deviation | Sample Count | Lab Samples |
|---|---|---|---|---|---|
| BiomeSight | 28.061 % | 0.006 % | 0.006 % | 832.0 | 2965 |
| CerbaLab | 66.667 % | 0 % | 0 % | 2.0 | 3 |
| Medivere | 42.857 % | 0.021 % | 0.033 % | 3.0 | 7 |
| Thryve | 0.503 % | 0.003 % | 0.004 % | 7.0 | 1392 |
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