[GmRepo] Bacteria associated to Autoimmune Diseases

This is a novel way of detecting patterns, instead of looking at the values, we use the rare bacteria to determine if the rate bacteria shifts matches. The table below does not show the amount, but how often a bacteria is seen in samples with various conditions. In general, if it is seen less, it is likely that the percentile values seen will be lower. If it seen more, than the percentile values will likely be higher than average.

If you are not logged in, you will see the full list. If you are logged in, then it is filtered to the sample you have selected. The data comes from 72,000+ samples on GMrepo : a curated database of human gut metagenomes

This is an experimental analysis

These are not predictive (chicken and egg questions). Values over 66% or below 33% that are a match may be a concern

Rank Name Autoimmune Diseases
family Candidatus Accumulibacter Less
genus Acetobacter Less
genus Acetonema Less
genus Achromobacter More
genus Acidobacterium Less
genus Acidocella Less
Genus Actinoallomurus Less
genus Actinobaculum Less
genus Actinocorallia More
genus Adlercreutzia Less
genus Aerococcus Less
genus Aeromicrobium More
genus Aeromonas More
genus Agrobacterium Less
genus Algoriphagus Less
genus Alicycliphilus Less
genus Alicyclobacillus Less
genus Aminobacter Less
genus Anabaena More
genus Anaerofilum More
genus Anaeroplasma Less
genus Apibacter Less
genus Aquimarina More
genus Arcobacter More
genus Bacteriovorax More
genus Balneola More
genus Bartonella Less
genus Bifidobacterium Less
genus Bordetella More
genus Bradyrhizobium Less
genus Brevibacillus Less
genus Brochothrix Less
genus Burkholderia Less
genus Butyrivibrio Less
genus Caldicellulosiruptor Less
genus Candidatus Amoebophilus Less
genus Candidatus Arthromitus Less
genus Candidatus Babela Less
genus Candidatus Koribacter Less
genus Candidatus Pelagibacter Less
genus Candidatus Phytoplasma Less
genus Candidatus Protochlamydia Less
genus Cellulophaga Less
genus Cellulosilyticum Less
genus Chelatococcus More
genus Chlorobaculum More
genus Chloroflexus More
genus Chthonomonas Less
genus Citrobacter More
genus Clostridium Less
genus Coleofasciculus Less
genus Collinsella Less
genus Comamonas More
genus Conchiformibius More
genus Conexibacter Less
genus Cryptobacterium Less
genus Cupriavidus Less
genus Cyanothece More
genus Dehalobacter Less
genus Deinococcus Less
genus Desulfatiglans Less
genus Desulfococcus Less
genus Desulfomonile Less
genus Desulfonatronum Less
genus Dietzia Less
genus Dolosigranulum Less
genus Dyadobacter Less
genus Elizabethkingia More
genus Enterovibrio Less
genus Entomoplasma More
genus Erwinia Less
genus Exiguobacterium Less
genus Filifactor Less
genus Fodinicurvata More
genus Gallibacterium Less
genus Gallionella Less
genus Gemmata Less
genus Geobacter More
genus Geofilum Less
genus Geothrix Less
genus Gillisia More
genus Granulicella Less
genus Hafnia More
genus Halanaerobium Less
genus Haliscomenobacter Less
genus Halomonas Less
genus Halothermothrix Less
genus Halothiobacillus Less
genus Heliobacterium Less
genus Herbaspirillum Less
genus Hespellia Less
Genus Hylemonella More
genus Hyphomicrobium Less
genus Ignatzschineria Less
genus Ignavigranum Less
genus Insolitispirillum More
genus Janibacter Less
genus Klebsiella More
genus Kribbella Less
genus Kyrpidia Less
genus Lautropia More
genus Lawsonia Less
genus Legionella More
genus Lentisphaera Less
genus Leptotrichia More
genus Leucobacter Less
genus Marichromatium More
genus Marinococcus More
genus Marinomonas Less
genus Megasphaera Less
genus Meiothermus Less
genus Mesorhizobium Less
Genus Metallosphaera More
genus Methanobrevibacter Less
genus Methanomassiliicoccus Less
genus Microvirga Less
genus Moraxella Less
genus Morganella More
genus Mycoplasma Less
genus Nesterenkonia Less
genus Nitrobacter Less
genus Nitrosospira Less
genus Niveispirillum More
genus Nocardia Less
genus Nonomuraea Less
genus Novosphingobium More
Genus Oceanisphaera Less
genus Oceanobacillus Less
genus Orenia Less
genus Owenweeksia Less
genus Oxalophagus Less
genus Pandoraea Less
genus Pantoea Less
genus Paraburkholderia Less
genus Parachlamydia Less
genus Paracoccus Less
genus Pectinatus Less
genus Pediococcus Less
genus Pedomicrobium More
genus Pelobacter Less
genus Pimelobacter More
genus Porphyrobacter Less
genus Propionibacterium Less
genus Proteus More
genus Providencia More
genus Pseudoalteromonas Less
genus Pseudomonas More
genus Pseudothermotoga Less
genus Pseudoxanthomonas More
genus Ralstonia Less
genus Reinekea Less
genus Rhizobium Less
genus Rhodopseudomonas Less
genus Rothia More
genus Rudaea Less
genus Runella Less
genus Saccharibacter Less
genus Saprospira Less
genus Scytonema More
genus Sedimenticola Less
genus Sediminibacterium Less
genus Seinonella Less
genus Shewanella Less
genus Simonsiella More
genus Singulisphaera Less
genus Sneathia More
genus Solibacillus Less
genus Sphaerochaeta Less
genus Sphingomonas Less
genus Sporocytophaga Less
genus Streptobacillus Less
genus Succinimonas More
genus Sulfobacillus Less
genus Sulfuricella Less
genus Synechococcus Less
genus Synergistes Less
genus Syntrophobotulus Less
genus Terribacillus Less
genus Thauera Less
genus Thermicanus More
genus Thermoanaerobacter Less
genus Thermodesulfobium Less
genus Thermomonas Less
genus Thermosipho Less
genus Thermus Less
genus Thioalkalivibrio Less
genus Thiobacillus Less
Genus Thiococcus Less
genus Thiocystis Less
genus Thiomonas More
genus Treponema Less
genus Turicella Less
genus Ureibacillus Less
genus Variovorax More
genus Verminephrobacter Less
genus Vibrio Less
genus Weeksella More
genus Wolbachia Less
genus Wolinella Less
genus Xanthomonas Less
species [Clostridium] cellulolyticum More
species [Clostridium] citroniae More
species [Clostridium] methylpentosum Less
species [Clostridium] viride Less
species [Eubacterium] dolichum Less
species [Eubacterium] hallii Less
species [Eubacterium] sulci More
species [Ruminococcus] gnavus Less
species Acetobacter pasteurianus Less
species Acetonema longum Less
species Acholeplasma brassicae Less
species Achromobacter piechaudii More
species Achromobacter xylosoxidans Less
species Acidobacterium capsulatum Less
species Acidovorax avenae More
species Acidovorax konjaci More
species Acinetobacter bereziniae More
species Acinetobacter genomic species 11 More
species Acinetobacter haemolyticus More
species Acinetobacter johnsonii More
species Acinetobacter junii More
species Acinetobacter lwoffii Less
species Acinetobacter pittii Less
species Acinetobacter radioresistens Less
species ACM 2034 Less
species Actinobacillus succinogenes Less
species Actinobaculum massiliense Less
species Actinocorallia aurantiaca More
species Actinomyces europaeus Less
species Actinomyces hordeovulneris More
species Actinomyces radicidentis Less
species Actinomyces sp. More
species Actinomyces sp. CCUG 28744 More
species Actinomyces suimastitidis Less
species Acuformis perennis More
species Adhaeribacter terreus More
species Adlercreutzia equolifaciens Less
species Aerococcus viridans Less
species Aeromicrobium marinum Less
species Aeromonas aquariorum More
Species aestuarii Less
species AJ 2197 Less
Species alactolyticus Less
Species algicola More
species Algoriphagus marincola Less
species Alicycliphilus denitrificans Less
species Alistipes sp. RMA 9912 Less
species Alkaliphilus metalliredigens Less
species Alteromonas macleodii Less
species Aminobacter aminovorans Less
species anaerobic eubacterium PCP-1 Less
species Antarctic bacterium R-8282 More
species Aquaspirillum aquaticum More
species Arcobacter butzleri More
Species arcticus Less
species Arthrobacter sp. FB24 Less
species ATCC 12706 More
species ATCC 13125 Less
species ATCC 27409 More
species ATCC 29543 Less
species ATCC 33119 More
species ATCC 33121 More
species ATCC 33487 More
species ATCC 35035 Less
species ATCC 35892 Less
species ATCC 35979 More
species ATCC 43386 More
species ATCC 49337 More
species ATCC 49652 More
species ATCC 49673 Less
species ATCC 49724 Less
species ATCC 49792 Less
species ATCC 49852 Less
species ATCC 49927 Less
species ATCC 49956 Less
species ATCC 51200 Less
species ATCC 51230 Less
species ATCC 51547 Less
species ATCC 51573 More
species ATCC 700827 Less
species ATCC BAA-1038 More
species ATCC BAA-1088 More
species ATCC BAA-1589 More
species ATCC BAA-1885 Less
species ATCC BAA-2412 Less
species ATCC BAA-2476 Less
species ATCC BAA-269 Less
species ATCC BAA-344 Less
species ATCC BAA-404 More
species ATCC BAA-599 Less
species Bacillus aquatilis Frankland and Frankland 1889 Less
species Bacillus cellulosilyticus Less
species Bacillus cereus More
Species Bacillus halmapalus More
species Bacillus macroides Bennett and Canale-Parola 1965 Less
species Bacillus nirobakter (sic) Castellani and Chamers 1919 Less
species Bacillus thermosphaericus Less
species Bacillus trypoxylicola More
species Bacteriovorax stolpii More
species Bacterium fascians (Tilford 1936) Lacey 1939 Less
species Bacterium thiocyanoxidans Happold and Key 1937 More
species Bacteroides clarus Less
species Bacteroides coprocola Less
species Bacteroides finegoldii Less
species Bacteroides fluxus More
species Bacteroides luti Less
species Bacteroides reticulotermitis Less
species Bacteroides salanitronis Less
species Bacteroides xylanisolvens Less
Species bactoclasticum Less
species Bartonella bacilliformis Less
species BCRC 17933 More
species Bifidobacterium adolescentis Less
species Bifidobacterium asteroides Less
species Bifidobacterium biavatii Less
species Bifidobacterium bifidum Less
species Bifidobacterium breve Less
species Bifidobacterium catenulatum Less
species Bifidobacterium choerinum Less
species Bifidobacterium dentium Less
species Bifidobacterium indicum Less
species Bifidobacterium longum Less
species Bifidobacterium pseudolongum Less
species Bifidobacterium saguini Less
species Bradyrhizobium lablabi Less
species Bradyrhizobium sp. ORS 278 Less
species Brevibacillus brevis Less
species Brevibacterium antiquum More
species Brevibacterium maris (Harrison 1929) Breed 1953 Less
species Brevundimonas aurantiaca More
species Brevundimonas naejangsanensis Less
species Brevundimonas subvibrioides More
species Burkholderia cepacia Less
species Burkholderia cordobensis YI23 Less
species Burkholderia sp. L226 Less
species Butyrivibrio crossotus Less
species Butyrivibrio proteoclasticus Less
species Campylobacter concisus More
species Campylobacter hyointestinalis Less
species Campylobacter upsaliensis Less
species Candidatus Accumulibacter phosphatis Less
species Candidatus Amoebophilus asiaticus Less
species Candidatus Arthromitus sp. SFB-rat-Yit Less
species Candidatus Babela massiliensis Less
species Candidatus Blochmannia floridanus More
species Candidatus Koribacter versatilis Less
species Candidatus Liberibacter americanus More
species Candidatus Methanomassiliicoccus intestinalis Less
species Candidatus Phytoplasma mali Less
species Candidatus Protochlamydia amoebophila Less
species Capnocytophaga granulosa More
species Carnobacterium divergens More
species Caulobacter henricii Less
species Caulobacter vibrioides Less
species CCTCC AB205007 Less
species CCUG 11878 Less
species CCUG 348 Less
species CCUG 46150 Less
species CCUG 48825 Less
species CCUG 49271 More
species CCUG 53856 Less
species Cellulosilyticum lentocellum Less
species CGMCC 1.6117 Less
species Chryseobacterium glaciei More
species Chryseobacterium hispalense Less
species Chthonomonas calidirosea Less
species CIP 106121 More
species CIP 107839 More
species CIP 108053 Less
species CIP 108786 Less
species Citrobacter freundii More
species Citrobacter koseri More
species Clostridioides mangenotii Less
species Clostridium aceticum More
species Clostridium beijerinckii Less
species Clostridium butyricum Less
species Clostridium celatum Less
species Clostridium frigoris More
species Clostridium gasigenes Less
species Clostridium paraputrificum Less
species Clostridium perfringens Less
species Clostridium sartagoforme Less
species Clostridium septicum Less
species Clostridium sp. SY8519 Less
species Clostridium sporogenes Less
species Clostridium tertium Less
species Clostridium tetani Less
species Clostridium thermobutyricum Less
species Cohnella xylanilytica More
species Coleofasciculus chthonoplastes Less
species Collinsella aerofaciens Less
species Collinsella stercoris Less
species Conexibacter woesei Less
species Coprobacillus cateniformis More
species Corynebacterium accolens Less
species Corynebacterium glucuronolyticum Less
species Corynebacterium kroppenstedtii Less
species Corynebacterium mycetoides More
species Corynebacterium otitidis Less
species Corynebacterium suis Soltys and Spratling 1957 Less
species Corynebacterium tuscaniense Less
species CRBIP 24.179 Less
species Cronobacter muytjensii More
species Cryptobacterium curtum Less
Species cunicula More
species Cupriavidus metallidurans Less
species Cutibacterium acnes Less
species Cyanobacteria bacterium Yellowstone A-Prime Less
species Dehalobacter sp. CF Less
species Desulfomonile tiedjei Less
species Desulfonatronum lacustre Less
species Desulfonema magnum More
species Desulfotomaculum gibsoniae More
species Dolosigranulum pigrum Less
species DSM 11293 Less
species DSM 1135 More
species DSM 15362 Less
species DSM 16501 More
species DSM 17973 More
species DSM 19938 Less
species DSM 5680 Less
species Elizabethkingia meningoseptica More
species Enterobacter hormaechei Less
species Enterobacteriaceae bacterium 9_2_54FAA More
species Enterococcus durans Less
species Enterococcus gilvus Less
Species Entomoplasma somnilux More
species Erysipelotrichaceae bacterium 3_1_53 More
species Eubacterium oxidoreducens More
species Eubacterium uniforme Less
species Exiguobacterium sp. AT1b Less
species Facklamia ignava More
species Ferrimonas futtsuensis Less
species Filifactor alocis Less
species Fusobacterium equinum Less
species Fusobacterium gonidiaformans Less
species Fusobacterium mortiferum Less
species Fusobacterium necrophorum Less
species Fusobacterium perfoetens Less
species Fusobacterium periodonticum More
species Fusobacterium varium Less
species Gallibacterium anatis Less
species Gallionella capsiferriformans Less
species gamma proteobacterium HdN1 Less
species Gemmata obscuriglobus Less
species Geobacter species Less
species Geofilum rubicundum Less
species Geothrix fermentans Less
Species gerneri More
species Granulicatella elegans More
species Hafnia alvei More
Species hakonensis More
species Haliscomenobacter hydrossis Less
species Halolactibacillus miurensis More
species Halothermothrix orenii Less
species Halothiobacillus neapolitanus Less
species Hespellia stercorisuis Less
species Ignavigranum ruoffiae Less
species Insolitispirillum peregrinum More
species JCM 11775 Less
species JCM 6498 Less
species Jeotgalicoccus pinnipedialis Less
species KACC 12744 Less
species Klebsiella oxytoca More
species Klebsiella pneumoniae aerogenes More
species Kocuria rhizophila Less
species Kyrpidia tusciae Less
species Lachnoclostridium phytofermentans Less
species Lactobacillus acidophilus Less
species Lactobacillus agilis More
species Lactobacillus animalis Less
species Lactobacillus brantae Less
species Lactobacillus coleohominis Less
species Lactobacillus floricola Less
species Lactobacillus fuchuensis Less
species Lactobacillus gallinarum Less
species Lactobacillus gasseri Less
species Lactobacillus ingluviei Less
species Lactobacillus johnsonii Less
species Lactobacillus mucosae Less
species Lactobacillus murinus Less
species Lactobacillus oris Less
species Lactobacillus parafarraginis More
species Lactobacillus paralimentarius Less
species Lactobacillus pontis Less
species Lactobacillus reuteri Less
species Lactobacillus ruminis Less
species Lactobacillus salivarius Less
species Lactobacillus sanfranciscensis Less
species Lactobacillus vaginalis Less
species Lactococcus garvieae Less
species Lactococcus raffinolactis Less
species Lautropia mirabilis More
species Lawsonia intracellularis Less
species Legionella lansingensis More
species Leptotrichia goodfellowii More
species Leptotrichia wadei More
species LMG:5929 More
species LMG:7828 More
species LMG:9496 Less
species Lysinibacillus fusiformis More
species Marinomonas polaris Less
species MCC 2795 Less
species Mediterranea massiliensis More
species Megamonas hypermegale Less
species Megasphaera cerevisiae Less
species Megasphaera elsdenii Less
species Meiothermus silvanus Less
species Mesorhizobium ciceri More
species Mesorhizobium loti Less
species Methanobrevibacter smithii Less
species Methylobacterium organophilum More
species Micrococcus asaccharolyticus (Distaso 1912) Hall 1948 More
species Moraxella catarrhalis Less
species Moraxella osloensis Less
species Morganella morganii More
Species mossii Less
Species mulderi Less
species Neisseria weaveri More
species Nitrosospira multiformis Less
species Niveispirillum irakense More
species Oxalobacter vibrioformis More
species Oxalophagus oxalicus Less
species Paenibacillus alvei More
species Paenibacillus apiarius More
species Paenibacillus larvae Less
species Paenibacillus sepulcri More
species Pandoraea pnomenusa Less
species Pantoea ananatis Less
species Paraburkholderia fungorum Less
species Paraburkholderia phymatum Less
species Paraburkholderia xenovorans Less
species Parachlamydia acanthamoebae Less
species Paracoccus denitrificans More
species Paraprevotella xylaniphila Less
species Pectinatus haikarae Less
species Pediococcus acidilactici Less
species Pediococcus damnosus Less
species Pediococcus parvulus Less
species Pediococcus pentosaceus Less
species Pelobacter acetylenicus Less
Species pentosovorans More
species Persicobacter psychrovividus More
species Photobacterium kishitanii More
species Pimelobacter simplex More
species Planococcus antarcticus Less
species Porphyromonas bennonis More
species Porphyromonas somerae More
species Prevotella aurantiaca More
species Prevotella baroniae More
species Prevotella buccae Less
species Prevotella copri Less
species Prevotella dentalis Less
species Prevotella dentasini Less
species Prevotella enoeca Less
species Prevotella melaninogenica More
species Prevotella multisaccharivorax Less
species Prevotella oryzae Less
species Prevotella oulorum Less
species Prevotella paludivivens Less
species Prevotella shahii Less
species Proteus hauseri More
species Proteus mirabilis More
species Proteus penneri More
species Proteus vulgaris More
species Providencia heimbachae Less
species Providencia stuartii More
species Pseudoalteromonas luteoviolacea More
Species pseudodiphtheriticum Less
species Pseudomonas alcaligenes Less
species Pseudomonas fluorescens More
species Pseudomonas fragi More
species Pseudomonas oleovorans More
species Pseudomonas parafulva Less
species Pseudomonas putida More
species Pseudomonas xanthomarina More
species Pseudorhodobacter ferrugineus More
species Pseudoxanthomonas suwonensis Less
species Ralstonia pickettii Less
species Ralstonia solanacearum Less
species Rheinheimera baltica Less
species Rhizobium etli Less
species Rhodococcus hoagii More
species Rhodopseudomonas palustris Less
species RIA 1112 More
species Roseiflexus castenholzii Less
species Roseiflexus sp. RS-1 Less
Species roseosporus More
species Rothia mucilaginosa More
species Rudaea cellulosilytica Less
species Ruminococcus bromii Less
species Saccharibacter floricola Less
species Saprospira grandis Less
species secondary endosymbiont of Ctenarytaina eucalypti More
species secondary endosymbiont of Heteropsylla cubana More
species Sediminibacterium salmoneum Less
species Seinonella peptonophila Less
Species selenatis Less
Species simplex More
species Singulisphaera acidiphila Less
species Sneathia sanguinegens More
Species soli More
species Sphingobacterium multivorum Less
species Sphingomonas jaspsi Less
species Sphingomonas paucimobilis Less
species Sphingomonas wittichii More
species Sphingopyxis macrogoltabida More
species Spiroplasma floricola Less
species Spiroplasma platyhelix Less
species Sporocytophaga myxococcoides Less
species Staphylococcus haemolyticus Less
species Staphylococcus saprophyticus Less
species strain 8 More
species strain SL-HP Less
species Streptococcus faecalis Less
species Streptococcus thoraltensis More
species Streptococcus vestibularis Less
species Streptomyces aureus More
species Streptomyces coelicolor More
species Streptomyces griseus More
species Succinimonas amylolytica More
species Sulfuricella denitrificans Less
species Sutterella sanguinus Less
species Syntrophobotulus glycolicus Less
species Thermicanus aegyptius More
species Thermoanaerobacter kivui More
species Thermodesulfobium narugense Less
species Thermodesulfovibrio aggregans Less
species Thermodesulfovibrio thiophilus More
species Thermomonas brevis Less
species Thermus scotoductus Less
species Thioalkalivibrio sulfidiphilus Less
species Thiobacillus denitrificans Less
species Thiocystis violascens Less
species Tissierella creatinophila Less
species Treponema berlinense Less
species Treponema brennaborense Less
species Treponema maltophilum Less
species Treponema paraluiscuniculi Less
species Treponema succinifaciens Less
species Turicibacter sanguinis Less
species Veillonella parvula Less
species Verminephrobacter eiseniae Less
species Vibrio alginolyticus Less
species Vibrio crassostreae Less
species Vibrio harveyi Less
Species vulgaris More
species Weeksella virosa More
species Weissella soli Less
species Xanthomonas albilineans Less
species Xanthomonas translucens Less
species Xenorhabdus bovienii Less
Species yoronensis Less

(Legacy User)

This is an Academic site. It generates theoretical models of what may benefit a specific microbiome results.

Copyright 2016-2021 Lassesen Consulting, LLC [2007], DBA, Microbiome Prescription. All rights served. Permission to data scrap or reverse engineer is explicitly denied to all users. U.S. Code Title 18 PART I CHAPTER 47 ยงโ€ฏ1030, CETS No.185, CFAA