[GmRepo] Bacteria associated to Clostridium difficile

This is a novel way of detecting patterns, instead of looking at the values, we use the rare bacteria to determine if the rate bacteria shifts matches. The table below does not show the amount, but how often a bacteria is seen in samples with various conditions. In general, if it is seen less, it is likely that the percentile values seen will be lower. If it seen more, than the percentile values will likely be higher than average.

If you are not logged in, you will see the full list. If you are logged in, then it is filtered to the sample you have selected. The data comes from 72,000+ samples on GMrepo : a curated database of human gut metagenomes

This is an experimental analysis

These are not predictive (chicken and egg questions). Values over 66% or below 33% that are a match may be a concern

Rank Name Clostridium difficile
Unknown 1247519   More
  genus Abiotrophia   Less
  genus Acetoanaerobium   More
  genus Acetobacter   Less
  genus Acetobacterium   More
  genus Acholeplasma   Less
  genus Achromobacter   Less
  genus Acidimicrobium   More
  genus Acidiphilium   More
  genus Acidithiobacillus   More
  genus Acidobacterium   Less
  genus Acidovorax   More
  genus Acinetobacter   Less
  genus Actinobacillus   More
  genus Actinomyces   Less
  genus Adhaeribacter   More
  genus Advenella   More
  genus Aequorivita   More
  genus Aerosphaera   Less
  genus Alcanivorax   More
  genus Aliivibrio   More
  genus Alishewanella   Less
  genus Alkaliflexus   More
  genus Alloprevotella   More
  genus Altererythrobacter   More
  genus Alteromonas   Less
  genus Ammonifex   More
  genus Amphibacillus   More
  genus Anabaena   More
  genus Anaerolinea   More
  genus Anaeromyxobacter   More
  genus Anaeroplasma   Less
  genus Anaerorhabdus   More
  genus Anaerostipes   Less
  genus Anaplasma   More
  genus Aneurinibacillus   Less
  genus Aquaspirillum   Less
  genus Aromatoleum   More
  genus Arsenophonus   More
  genus Arthrobacter   More
  genus Asaia   Less
  genus Asteroleplasma   More
  genus Azotobacter   Less
  genus Bacteriovorax   Less
  genus Bartonella   Less
  genus Beijerinckia   More
  genus Belliella   Less
  genus Bifidobacterium   Less
  genus Bilophila   Less
  genus Blautia   Less
  genus Bordetella   More
  genus Borrelia   More
  genus Borreliella   Less
  genus Brachybacterium   Less
  genus Brevundimonas   Less
  genus Brochothrix   Less
  genus Buchnera   Less
  genus Butyrivibrio   Less
  genus Caldanaerobacter   More
  genus Caldanaerobius   More
  genus Caldicellulosiruptor   Less
  genus Caldilinea   More
  genus Caminicella   More
  genus Campylobacter   Less
  genus Candidatus Azobacteroides   More
  genus Candidatus Desulforudis   More
  genus Cardiobacterium   Less
  genus Carnobacterium   More
  genus Cellulomonas   More
  genus Cellvibrio   More
  genus Chloroherpeton   More
  genus Chondromyces   Less
  genus Chromobacterium   More
  genus Chryseobacterium   Less
  genus Citrobacter   Less
  genus Clavibacter   Less
  genus Cloacimonas   Less
  genus Clostridium   Less
  genus Cobetia   Less
  genus Cohnella   Less
  genus Collinsella   Less
  genus Colwellia   More
  genus Comamonas   Less
  genus Conexibacter   More
  genus Coprobacillus   Less
  genus Coprococcus   Less
  genus Corynebacterium   Less
  genus Croceibacter   More
  genus Cryptobacterium   More
  genus Cytophaga   More
  genus Deferribacter   More
  genus Dehalogenimonas   More
  genus Deinococcus   Less
  genus Dendrosporobacter   Less
  genus Denitrovibrio   Less
  genus Desemzia   Less
  genus Desulfarculus   More
  genus Desulfatibacillum   More
  genus Desulfitobacterium   More
  genus Desulfohalobium   More
  genus Desulfonispora   More
  genus Desulfotomaculum   More
  genus Desulfurispirillum   More
  genus Desulfurivibrio   More
  genus Dialister   Less
  genus Dichelobacter   More
  genus Dickeya   More
  genus Dictyoglomus   More
  genus Dietzia   Less
  genus Dolosigranulum   Less
  genus Dorea   Less
  genus Dysgonomonas   Less
  genus Echinicola   More
  genus Ectothiorhodospira   More
  genus Edwardsiella   More
  genus Ehrlichia   More
  genus Emticicia   Less
  genus Enhydrobacter   More
  genus Enterococcus   More
  genus Erysipelatoclostridium   Less
  genus Erysipelothrix   More
  genus Ethanoligenens   More
  genus Eubacterium   Less
  genus Faecalibacterium   Less
  genus Faecalicoccus   Less
  genus Faecalitalea   More
  genus Ferrimonas   More
  genus Fibrobacter   Less
  genus Flammeovirga   More
  genus Flavobacterium   More
  genus Flectobacillus   More
  genus Formosa   More
  genus Francisella   More
  genus Frankia   More
  genus Gardnerella   More
  genus Gemella   Less
  genus Gemmobacter   Less
  genus Geobacter   More
  genus Geofilum   More
  genus Gillisia   More
  genus Globicatella   Less
  genus Gluconacetobacter   More
  genus Gordonibacter   More
  genus Gottschalkia   More
  genus Gramella   More
  genus Granulibacter   More
  genus Haemophilus   Less
  genus Hahella   More
  genus Haliscomenobacter   Less
  genus Halobacteroides   More
  genus Halomonas   More
  genus Halotalea   More
  genus Hathewaya   More
  genus Helcococcus   More
  genus Helicobacter   More
  genus Heliobacterium   Less
  genus Herminiimonas   More
  genus Hirschia   Less
  genus Holdemanella   Less
  genus Hymenobacter   Less
  genus Idiomarina   More
  genus Ignavibacterium   Less
  genus Intestinibacter   Less
  genus Janthinobacterium   More
  genus Jeotgalicoccus   Less
  genus Kandleria   Less
  genus Kangiella   More
  genus Kinetoplastibacterium   More
  genus Kocuria   More
  genus Kofleria   More
  genus Kosmotoga   More
  genus Kozakia   More
  genus Labilithrix   Less
  genus Lactobacillus   More
  genus Lactococcus   Less
  genus Lactonifactor   More
  genus Laribacter   Less
  genus Lautropia   Less
  genus Lawsonia   More
  genus Leadbetterella   More
  genus Legionella   More
  genus Leptolyngbya   More
  genus Leucobacter   Less
  genus Leuconostoc   More
  genus Lewinella   More
  genus Listeria   More
  genus Lysinibacillus   Less
  genus Macrococcus   More
  genus Mageeibacillus   More
  genus Mahella   More
  genus Marinilactibacillus   More
  genus Marinimicrobium   More
  genus Marinobacter   More
  genus Marinobacterium   Less
  genus Martelella   More
  genus Megamonas   Less
  genus Melissococcus   Less
  genus Mesonia   More
  genus Mesorhizobium   Less
  genus Methanobrevibacter   Less
  genus Methylacidiphilum   More
  genus Methyloligella   Less
  genus Methylophaga   More
  genus Microbulbifer   Less
  genus Micrococcus   Less
  genus MLOs   More
  genus Modestobacter   More
  genus Moorella   More
  genus Moraxella   Less
  genus Mucilaginibacter   Less
  genus Muricauda   More
  genus Mycolicibacterium   Less
  genus Natranaerobius   More
  genus Neomegalonema   More
  genus Niastella   More
  genus Nicoletella   Less
  genus Nisaea   Less
  genus Nitratiruptor   More
  genus Nitrosococcus   More
  genus Nitrosomonas   Less
  genus Nitrospira   More
  genus Nonlabens   More
  genus Nonomuraea   Less
  genus Novosphingobium   More
  genus Oenococcus   More
  genus Orientia   More
  genus Ornithobacterium   More
  genus Oscillatoria   More
  genus Oxalicibacterium   More
  genus Paludibacter   More
  genus Pandoraea   Less
  genus Paracoccus   Less
  genus Paraprevotella   More
  genus Pectinatus   Less
  genus Pectobacterium   More
  genus Pediococcus   More
  genus Pedobacter   More
  genus Pelagibacter   Less
  genus Pelodictyon   More
  genus Peptostreptococcus   More
  genus Photorhabdus   More
  genus Phycisphaera   More
  genus Planococcus   More
  genus Plesiomonas   More
  genus Polaribacter   More
  genus Ponticaulis   More
  genus Porphyrobacter   Less
  genus Porphyromonas   More
  genus Prochlorococcus   More
  genus Prolixibacter   More
  genus Prosthecobacter   Less
  genus Proteiniphilum   More
  genus Proteus   More
  genus Providencia   More
  genus Pseudanabaena   More
  genus Pseudoalteromonas   Less
  genus Pseudopedobacter   More
  genus Psychroflexus   More
  genus Puniceispirillum   More
  genus Rahnella   More
  genus Ralstonia   Less
  genus Raoultella   Less
  genus Rheinheimera   More
  genus Rhodoferax   More
  genus Rhodoplanes   More
  genus Rhodovulum   More
  genus Rickettsia   More
  genus Riemerella   More
  genus Rikenella   More
  genus Robiginitalea   More
  genus Roseomonas   Less
  genus Rubinisphaera   More
  genus Rubrivivax   More
  genus Rudaea   Less
  genus Rudanella   More
  genus Ruegeria   More
  genus Runella   More
  genus Saccharicrinis   More
  genus Salegentibacter   Less
  genus Salinibacter   More
  genus Salinisphaera   Less
  genus Sebaldella   More
  genus Sedimenticola   Less
  genus Sediminibacterium   Less
  genus Segetibacter   More
  genus Selenomonas   More
  genus Serratia   More
  genus Shewanella   More
  genus Shigella   More
  genus Singulisphaera   Less
  genus Sinorhizobium   More
  genus Sodalis   More
  genus Solibacillus   Less
  genus Solibacter   More
  genus Solitalea   More
  genus Sphaerobacter   Less
  genus Sphingobium   Less
  genus Sphingomonas   Less
  genus Spirosoma   Less
  genus Spirulina   More
  genus Sporosarcina   Less
  genus Stella   Less
  genus Streptomyces   More
  genus Streptosporangium   More
  genus Subdoligranulum   Less
  genus Succinivibrio   Less
  genus Suttonella   More
  genus Symbiobacterium   More
  genus Syntrophomonas   More
  genus Tannerella   More
  genus Tepidanaerobacter   More
  genus Tepidimonas   Less
  genus Terrisporobacter   More
  genus Tetragenococcus   More
  genus Thermacetogenium   More
  genus Thermicanus   Less
  genus Thermoanaerobacterium   More
  genus Thermobaculum   Less
  genus Thermocrinis   More
  genus Thermodesulfatator   More
  genus Thermodesulfovibrio   More
  genus Thermosynechococcus   Less
  genus Thermotoga   More
  genus Thiobacillus   Less
  genus Thiofaba   Less
  genus Tissierella   Less
  genus Tolumonas   Less
  genus Treponema   Less
  genus Trichodesmium   Less
  genus Truepera   Less
  genus Ureaplasma   More
  genus Ureibacillus   Less
  genus Vagococcus   Less
  genus Variovorax   More
  genus Verrucomicrobium   More
  genus Vibrio   More
  genus Viridibacillus   Less
  genus Vogesella   Less
  genus Weeksella   More
  genus Weissella   Less
  genus Wigglesworthia   Less
  genus Xanthomonas   More
  genus Xenorhabdus   More
  genus Xylella   More
  genus Zeaxanthinibacter   Less
  genus Zunongwangia   Less
  genus Zymomonas   More
  species [Bacillus] selenitireducens   More
  species [Bacteroides] pectinophilus   Less
  species [Brevibacterium] frigoritolerans   Less
  species [Clostridium] leptum   Less
  species [Clostridium] saccharogumia   Less
  species [Clostridium] spiroforme   Less
  species [Clostridium] sporosphaeroides   Less
  species [Clostridium] symbiosum   Less
  species [Clostridium] viride   More
  species [Eubacterium] rectale   Less
  species [Eubacterium] saphenum   More
  species [Eubacterium] siraeum   Less
  species [Haemophilus] ducreyi   More
  species [Ruminococcus] gnavus   Less
  species [Ruminococcus] lactaris   Less
  species [Ruminococcus] torques   Less
  species 3I1B110   More
  species Abiotrophia defectiva   Less
  species Absiella tortuosum   More
  species ACAM 246   More
  species Acetoanaerobium sticklandii   More
  species Acetobacter pasteurianus   Less
  species Achromobacter xylosoxidans   Less
  species Acidimicrobium ferrooxidans   More
  species Acidiphilium cryptum   More
  species Acidithiobacillus ferrooxidans   More
  species Acidobacterium capsulatum   Less
  species Acidovorax avenae   More
  species Acidovorax ebreus Byrne-Bailey et al. 2010   More
  species Acidovorax sp. KKS102   More
  species Acinetobacter baumannii   Less
  species Acinetobacter bereziniae   Less
  species Acinetobacter calcoaceticus   Less
  species Acinetobacter gerneri   Less
  species Acinetobacter haemolyticus   Less
  species Acinetobacter johnsonii   Less
  species Acinetobacter lwoffii   Less
  species Acinetobacter parapertussis (Eldering and Kendrick 1938) Steel and Cowan 1964   More
  species Acinetobacter phosphorescens Brisou 1955   Less
  species Acinetobacter pittii   Less
  species Acinetobacter towneri   Less
  species Actinobacillus pleuropneumoniae   More
  species Actinobacillus scotiae   Less
  species Actinomyces lingnae   Less
  species Actinomyces pheochromogenus (sic) Conn 1917   More
  species Adhaeribacter terreus   More
  species Advenella kashmirensis   More
  species Aequorivita sublithincola   More
  species Aerococcus viridans   Less
  species Aeromonas veronii   More
  species Aerosphaera taetra   Less
  species Agathobaculum desmolans   Less
  species Aggregatibacter actinomycetemcomitans   More
  species Agrobacterium vitis   More
  species Agromonas oligotrophica   Less
  species Alcaligenes venustus   More
  species Alcanivorax dieselolei   Less
  species Alicyclobacillus acidocaldarius   More
  species Aliivibrio fischeri   More
  species Alkaliflexus imshenetskii   More
  species Alkalihalobacillus halodurans   More
  species Alkalihalobacillus pseudofirmus   Less
  species Alloprevotella tannerae   More
  species alpha proteobacterium HIMB59   More
  species Alteromonas macleodii   Less
  species Alteromonas mediterranea   Less
  species Amedibacillus dolichus   Less
  species Ammonifex degensii   More
  species Amphibacillus xylanus   More
  species Anabaena sp. (ATCC 27893)   Less
  species Anabaena sp. 90   More
  species Anaerobutyricum hallii   Less
  species Anaerococcus octavius   Less
  species Anaerolinea thermophila   More
  species Anaeromyxobacter dehalogenans   More
  species Anaeroplasma bactoclasticum   Less
  species Anaerorhabdus furcosa   More
  species Anaerostipes butyraticus   Less
  species Anaerostipes caccae   Less
  species Anaplasma argentium Lignieres 1914   More
  species Aneurinibacillus aneurinilyticus   Less
  species Anoxybacillus flavithermus   More
  species Aphanocapsa sp. (strain N-1)   More
  species Apilactobacillus ozensis   More
  species Aquaspirillum putridiconchylium   Less
  species Aromatoleum aromaticum   More
  species Arsenophonus nasoniae   More
  species Arthrobacter agilis   Less
  species Arthrobacter citreus   More
  species Arthromitus sp. SFB-mouse   Less
  species Asaia bogorensis   Less
  species Asteroleplasma anaerobium   More
  species ATCC 15444   More
  species ATCC 15829   Less
  species ATCC 23123   More
  species ATCC 31418   Less
  species ATCC 33071   More
  species ATCC 33202   More
  species ATCC 33223   Less
  species ATCC 33545   More
  species ATCC 35250   Less
  species ATCC 43273   Less
  species ATCC 478   Less
  species ATCC 49049   More
  species ATCC 49095   Less
  species ATCC 49179   Less
  species ATCC 49882   Less
  species ATCC 51227   Less
  species ATCC 51573   More
  species ATCC 700074   Less
  species ATCC 700308   More
  species ATCC 700351   Less
  species ATCC 700550   Less
  species ATCC BAA-1233   Less
  species ATCC BAA-1733   More
  species ATCC BAA-2433   More
  species ATCC BAA-244   More
  species ATCC BAA-312   More
  species ATCC BAA-803   More
  species Azospirillum brasilense   More
  species Bacillus cereus   More
  species Bacillus infantis   Less
  species Bacillus lentus   Less
  species Bacillus licheniformis   Less
  species Bacillus smithii   Less
  species Bacillus sonorensis   Less
  species Bacillus sp. 1NLA3E   More
  species Bacillus vanillea Chen et al. 2015   More
  species Bacteriovorax stolpii   Less
  species Bacteroides acidifaciens   More
  species Bacteroides eggerthii   Less
  species Bacteroides graminisolvens   More
  species Bacteroides helcogenes   More
  species Bacteroides heparinolyticus   More
  species Bacteroides ovatus   Less
  species Bacteroides reticulotermitis   Less
  species Bacteroides rodentium   More
  species Bacteroides zoogleoformans   More
  species BCC 076   More
  species BCC 845   Less
  species Beijerinckia mobilis   Less
  species Belliella baltica   Less
  species Bernardetia litoralis   More
  species Bifidobacterium bombi   Less
  species Bifidobacterium boum   Less
  species Bifidobacterium breve   Less
  species Bifidobacterium catenulatum   Less
  species Bifidobacterium choerinum   Less
  species Bifidobacterium cuniculi   Less
  species Bifidobacterium gallicum   Less
  species Bifidobacterium merycicum   Less
  species Bifidobacterium pseudocatenulatum   Less
  species Bifidobacterium pseudolongum   Less
  species Bifidobacterium pullorum   Less
  species Bifidobacterium scardovii   Less
  species Blattabacterium sp. (Periplaneta americana)   More
  species Blautia glucerasea   Less
  species Blautia hansenii   Less
  species Blautia luti   Less
  species Blautia obeum   Less
  species Bordetella avium   More
  species Bordetella bronchiseptica   More
  species Bordetella petrii   Less
  species Borrelia turicatae   More
  species Brachybacterium conglomeratum   Less
  species Bradyrhizobium lablabi   Less
  species Brevibacterium casei   Less
  species Brevibacterium ravenspurgense   Less
  species Brevundimonas diminuta   Less
  species Brevundimonas naejangsanensis   Less
  species Brochothrix thermosphacta   Less
  species Buchnera aphidicola   Less
  species Burkholderia cepacia   Less
  species Burkholderia multivorans   More
  species Burkholderia pseudomallei   More
  species Burkholderia sp. ATSB16   Less
  species Burkholderia sp. CCGE1003   More
  species Burkholderia sp. KJ006   More
  species Butyrivibrio crossotus   Less
  species Butyrivibrio hungatei   Less
  species Butyrivibrio proteoclasticus   More
  species Caballeronia insecticola   More
  species Caldanaerobacter subterraneus   More
  species Caldanaerobius polysaccharolyticus   More
  species Caldicellulosiruptor bescii   More
  species Caldilinea aerophila   More
  species Caminicella sporogenes   More
  species Campylobacter concisus   Less
  species Campylobacter curvus   Less
  species Campylobacter jejuni   Less
  species Campylobacter showae   Less
  species Campylobacter upsaliensis   Less
  species Candidatus Azobacteroides pseudotrichonymphae   More
  species Candidatus Cloacimonas acidaminovorans   Less
  species Candidatus Desulforudis audaxviator   More
  species Candidatus Kinetoplastibacterium oncopeltii   More
  species Candidatus Nitrospira defluvii Spieck et al. 2006   More
  species Candidatus Pelagibacter sp. IMCC9063   Less
  species Candidatus Phytoplasma australiense Davis et al. 1997   More
  species Candidatus Puniceispirillum marinum   More
  species Candidatus Solibacter usitatus   More
  species Capnocytophaga canimorsus   More
  species Capnocytophaga sputigena   Less
  species Cardiobacterium hominis   Less
  species Carnobacterium maltaromaticum   More
  species CCTCC AB 2052005   Less
  species CCTCC M 2011381   More
  species CCUG 47128   Less
  species CCUG 62929   More
  species CECT 7134   More
  species CECT 9037   More
  species Cellulomonas gilvus   More
  species Cellulophaga lytica   More
  species Cellulosilyticum ruminicola   Less
  species Cellvibrio japonicus   More
  species CFBP 1269   More
  species Chloroherpeton thalassium   More
  species Chromobacterium janthinum (Zopf) Ford 1927   More
  species CIP 106858   Less
  species CIP 109099   More
  species CIP 111153   Less
  species Citrobacter freundii   Less
  species Clavibacter michiganensis   Less
  species Clostridium acetobutylicum   More
  species Clostridium autoethanogenum   More
  species Clostridium baratii   Less
  species Clostridium botulinum   More
  species Clostridium butyricum   Less
  species Clostridium celatum   Less
  species Clostridium cellulovorans   More
  species Clostridium colicanis   Less
  species Clostridium collagenovorans   Less
  species Clostridium gasigenes   Less
  species Clostridium kluyveri   More
  species Clostridium novyi   More
  species Clostridium paraputrificum   Less
  species Clostridium pasteurianum   More
  species Clostridium perfringens   Less
  species Clostridium saccharobutylicum   Less
  species Clostridium sardiniense   More
  species Clostridium sp. BNL1100   More
  species Clostridium subterminale   Less
  species Clostridium tertium   Less
  species Clostridium tetani   More
  species Collinsella aerofaciens   Less
  species Comamonas terrigena   Less
  species Companilactobacillus alimentarius   Less
  species Companilactobacillus farciminis   Less
  species Companilactobacillus paralimentarius   Less
  species Conexibacter woesei   More
  species Coprobacillus cateniformis   Less
  species Coprococcus comes   Less
  species Coprococcus eutactus   Less
  species Corynebacterium aurimucosum   More
  species Corynebacterium imitans   Less
  species Corynebacterium kroppenstedtii   Less
  species Corynebacterium pseudodiphtheriticum   Less
  species Corynebacterium resistens   More
  species Corynebacterium tuberculostearicum   Less
  species Croceibacter atlanticus   More
  species Cronobacter sakazakii   More
  species Cronobacter turicensis   More
  species Cronobacter universalis   Less
  species Cryptobacterium curtum   More
  species Cutibacterium acnes   Less
  species Cytophaga hutchinsonii   More
  species Deferribacter desulfuricans   More
  species Dehalobacter sp. CF   More
  species Dehalogenimonas lykanthroporepellens   More
  species Dendrosporobacter quercicolus   Less
  species Denitrovibrio acetiphilus   Less
  species Desemzia incerta   Less
  species Desulfarculus baarsii   More
  species Desulfatibacillum alkenivorans   More
  species Desulfitobacterium dehalogenans   More
  species Desulfitobacterium dichloroeliminans   More
  species Desulfofarcimen acetoxidans   More
  species Desulfohalobium retbaense   More
  species Desulfonispora thiosulfatigenes   More
  species Desulfoscipio gibsoniae   More
  species Desulfosporosinus meridiei   More
  species Desulfosporosinus orientis   More
  species Desulfotomaculum nigrificans   More
  species Desulfotomaculum ruminis   More
  species Desulfovibrio alaskensis   More
  species Desulfovibrio desulfuricans   More
  species Desulfovibrio giganteus   More
  species Desulfovibrio gigas   More
  species Desulfovibrio senezii   More
  species Desulfovibrio vulgaris   More
  species Desulfurispirillum indicum   More
  species Desulfurivibrio alkaliphilus   More
  species Dialister invisus   Less
  species Dichelobacter nodosus   More
  species Dictyoglomus turgidum   More
  species Dolosigranulum pigrum   Less
  species Dorea longicatena   Less
  species DSM 15400   More
  species DSM 17306   More
  species DSM 19519   More
  species DSM 22759   More
  species DSM 22781   Less
  species DSM 24301   More
  species DSM 3660   More
  species DSM 4868   More
  species DSM 6061   More
  species Dyadobacter alkalitolerans   Less
  species Dyadobacter beijingensis   Less
  species Dysgonomonas capnocytophagoides   Less
  species Echinicola vietnamensis   More
  species Ectothiorhodospira haloalkaliphila   More
  species Ehrlichia ruminantium   More
  species Emticicia oligotrophica   Less
  species Enhydrobacter aerosaccus   More
  species Enterobacter asburiae   More
  species Enterobacter hormaechei   Less
  species Enterobacteriaceae bacterium strain FGI 57   More
  species Enterocloster bolteae   Less
  species Enterococcus asini   More
  species Enterococcus casseliflavus   More
  species Enterococcus dispar   More
  species Enterococcus faecium   More
  species Enterococcus hirae   More
  species Enterococcus mundtii   More
  species Enterococcus sulfureus   More
  species Erysipelatoclostridium ramosum   Less
  species Erysipelothrix rhusiopathiae   More
  species Ethanoligenens harbinense   More
  species Eubacterium plexicaudatum   More
  species Eubacterium xylanophilum   Less
  species Evansella cellulosilytica   More
  species Exiguobacterium sibiricum   More
  species Exiguobacterium sp. AT1b   Less
  species Exiguobacterium sp. MH3   More
  species Facklamia hominis   Less
  species Facklamia sourekii   Less
  species Faecalibacterium prausnitzii   Less
  species Faecalicoccus pleomorphus   Less
  species Faecalitalea cylindroides   More
  species Ferrimonas balearica   Less
  species Fibrobacter succinogenes   Less
  species Flavobacteriaceae bacterium 3519-10   More
  species Flavobacteriaceae bacterium JCM 19294   Less
  species Flavobacterium akiainvivens   Less
  species Flavobacterium branchiophilum   Less
  species Flavobacterium columnare   More
  species Flavobacterium indicum   More
  species Flectobacillus major   More
  species Formosa agariphila   More
  species Francisella persica   More
  species Francisella philomiragia   More
  species Frankia sp. EAN1pec   More
  species Fructilactobacillus florum   More
  species Fructilactobacillus lindneri   More
  species Fructilactobacillus sanfranciscensis   Less
  species Furfurilactobacillus siliginis   More
  species Fusobacterium mortiferum   Less
  species Fusobacterium periodonticum   Less
  species Fusobacterium ulcerans   Less
  species Fusobacterium varium   More
  species gamma proteobacterium HdN1   Less
  species Gardnerella vaginalis   More
  species Gemella haemolysans   Less
  species Geobacillus sp. C56-T3   More
  species Geobacillus sp. GHH01   More
  species Geobacillus sp. Y412MC52   Less
  species Geobacter lovleyi   More
  species Geofilum rubicundum   More
  species Gillisia limnaea   More
  species Gleimia europaea   Less
  species Globicatella sanguinis   Less
  species Gluconacetobacter diazotrophicus   More
  species Gordonibacter pamelaeae   More
  species Gottschalkia acidurici   More
  species Gramella forsetii   More
  species Granulibacter bethesdensis   More
  species Granulicatella elegans   Less
  species Haemophilus parainfluenzae   Less
  species Hahella chejuensis   More
  species Hahella ganghwensis   Less
  species Halanaerobium praevalens   Less
  species Haliscomenobacter hydrossis   Less
  species Halobacteroides halobius   More
  species Halomonas cupida   Less
  species Halomonas neptunia   More
  species Hathewaya histolytica   More
  species Helcococcus sueciensis   More
  species Helicobacter canadensis   More
  species Helicobacter hepaticus   More
  species Helicobacter mustelae   More
  species Helicobacter pullorum   Less
  species Helicobacter trogontum   Less
  species Heliomicrobium modesticaldum   Less
  species Herminiimonas arsenicoxydans   More
  species Holdemanella biformis   Less
  species Holzapfelia floricola   More
  species Hymenobacter luteus   Less
  species Hyphomicrobium nitrativorans   Less
  species Hyphomicrobium vulgare   Less
  species Hyphomonas jannaschiana   More
  species Hyphomonas oceanitis   More
  species IFO 14477   More
  species Ignavibacterium album   Less
  species Intestinibacter bartlettii   Less
  species Janibacter terrae   More
  species Janthinobacterium lividum   Less
  species Janthinobacterium sp. Marseille   More
  species JCM 11775   Less
  species JCM 11969   More
  species JCM 14963   More
  species Jeotgalicoccus pinnipedialis   Less
  species Jeotgalicoccus psychrophilus   Less
  species Kandleria vitulina   Less
  species Kangiella sediminilitoris   More
  species KCTC 12531   Less
  species Klebsiella aerogenes   Less
  species Klebsiella michiganensis   More
  species Klebsiella variicola   More
  species Kofleria flava   More
  species Kozakia baliensis   More
  species Labilithrix luteola   Less
  species Lachnoclostridium phytofermentans   More
  species Lacrimispora indolis   Less
  species Lacrimispora xylanolytica   Less
  species Lacticaseibacillus manihotivorans   More
  species Lacticaseibacillus pantheris   More
  species Lacticaseibacillus thailandensis   Less
  species Lactiplantibacillus pentosus   More
  species Lactiplantibacillus plantarum   More
  species Lactobacillus amylovorus   Less
  species Lactobacillus gallinarum   Less
  species Lactobacillus johnsonii   More
  species Lactobacillus selangorensis   Less
  species Lactobacillus taiwanensis   More
  species Lactococcus garvieae   Less
  species Lactococcus lactis   Less
  species Lactococcus piscium   More
  species Lactonifactor longoviformis   More
  species Lapidilactobacillus dextrinicus   Less
  species Laribacter hongkongensis   Less
  species Latilactobacillus curvatus   Less
  species Latilactobacillus fuchuensis   More
  species Lautropia mirabilis   Less
  species Lawsonia intracellularis   More
  species Leadbetterella byssophila   More
  species Legionella pneumophila   More
  species Lentilactobacillus buchneri   More
  species Lentilactobacillus hilgardii   More
  species Lentilactobacillus parabuchneri   Less
  species Leuconostoc fallax   More
  species Levilactobacillus brevis   Less
  species Ligilactobacillus acidipiscis   More
  species Ligilactobacillus agilis   More
  species Ligilactobacillus animalis   Less
  species Ligilactobacillus equi   Less
  species Ligilactobacillus murinus   Less
  species Ligilactobacillus ruminis   Less
  species Limosilactobacillus antri   More
  species Limosilactobacillus coleohominis   Less
  species Limosilactobacillus oris   Less
  species Limosilactobacillus panis   Less
  species Limosilactobacillus pontis   More
  species Liquorilactobacillus cacaonum   Less
  species Liquorilactobacillus ghanensis   Less
  species Listeria monocytogenes   More
  species LMG:1227   Less
  species LMG:4044   More
  species Macrococcus caseolyticus   More
  species Mageeibacillus indolicus   More
  species Mahella australiensis   More
  species Mammaliicoccus sciuri   Less
  species Marinimicrobium agarilyticum   More
  species Marinobacter adhaerens Gardes et al. 2010   Less
  species Marinobacter nauticus   More
  species Marinomonas polaris   Less
  species Marinomonas posidonica   Less
  species Martelella mediterranea   More
  species Megamonas hypermegale   Less
  species Megasphaera cerevisiae   Less
  species Melissococcus plutonius   Less
  species Mesonia algae   More
  species Mesorhizobium australicum   Less
  species Mesorhizobium loti   Less
  species Methanobrevibacter smithii   Less
  species Methylacidiphilum infernorum Hou et al. 2008   More
  species Methylobacterium adhaesivum   More
  species Modestobacter marinus   More
  species Moorella thermoacetica   More
  species Moraxella catarrhalis   Less
  species Moraxella nonliquefaciens   Less
  species Moraxella osloensis   Less
  species Muricauda flava   More
  species Muricauda ruestringensis   More
  species Musicola paradisiaca   More
  species Mycetohabitans rhizoxinica   Less
  species Mycoplasma haemocanis   Less
  species Mycoplasma leachii   More
  species Mycoplasma penetrans   More
  species Natranaerobius thermophilus   More
  species Neisseria bacilliformis   More
  species Neobacillus niacini   Less
  species Neomegalonema perideroedes   More
  species Niallia nealsonii   More
  species Niastella koreensis   More
  species Nicoletella semolina   Less
  species Nitratiruptor sp. SB155-2   More
  species Nitratiruptor tergarcus   Less
  species Nitrosococcus oceani   More
  species Nitrosomonas sp. Is79A3   Less
  species Nonlabens spongiae   More
  species Oceanobacillus iheyensis   More
  species Oenococcus oeni   More
  species Orientia tsutsugamushi   More
  species Ornithobacterium rhinotracheale   More
  species Oscillatoria acuminata   Less
  species Oscillatoria nigro-viridis   More
  species Paenibacillus anaericanus   More
  species Paenibacillus mucilaginosus   More
  species Paenibacillus sp. IHBB 10380   Less
  species Paenibacillus sp. JDR-2   More
  species Paenibacillus sp. Y412MC10   More
  species Paludibacter propionicigenes   More
  species Pantoea sp. At-9b   More
  species Pantoea vagans   More
  species Parabacteroides chinchillae   More
  species Parabacteroides johnsonii   Less
  species Paraburkholderia fungorum   Less
  species Paraburkholderia phenoliruptrix   More
  species Paracholeplasma brassicae   Less
  species Paraprevotella clara   More
  species Paraprevotella xylaniphila   Less
  species Parasutterella secunda   Less
  species Paucilactobacillus suebicus   Less
  species Pectinatus haikarae   Less
  species Pectobacterium atrosepticum   More
  species Pectobacterium carotovorum   More
  species Pediococcus cellicola   More
  species Pediococcus damnosus   More
  species Pediococcus ethanolidurans   More
  species Pediococcus pentosaceus   Less
  species Pediococcus stilesii   Less
  species Pelobacter propionicus   More
  species Pelodictyon phaeoclathratiforme   More
  species Peptoniphilus methioninivorax   Less
  species Peptoniphilus tyrrelliae   Less
  species Peptostreptococcus stomatis   Less
  species Peribacillus simplex   Less
  species Phenylobacterium zucineum   Less
  species Phocaeicola barnesiae   Less
  species Phocaeicola coprocola   Less
  species Phocaeicola coprophilus   Less
  species Phocaeicola dorei   More
  species Phocaeicola massiliensis   Less
  species Phocaeicola plebeius   Less
  species Phocaeicola sartorii   More
  species Phycisphaera mikurensis   More
  species Phytoplasma mali   More
  species Plesiomonas shigelloides   More
  species Ponticaulis koreensis   More
  species Porphyromonas asaccharolytica   More
  species Porphyromonas cangingivalis   Less
  species Porphyromonas canoris   More
  species Porphyromonas catoniae   Less
  species Porphyromonas circumdentaria   Less
  species Porphyromonas gingivalis   More
  species Porphyromonas levii   More
  species Prevotella albensis   More
  species Prevotella baroniae   More
  species Prevotella buccae   More
  species Prevotella buccalis   Less
  species Prevotella copri   Less
  species Prevotella dentalis   More
  species Prevotella disiens   More
  species Prevotella histicola   More
  species Prevotella intermedia   More
  species Prevotella micans   More
  species Prevotella multiformis   More
  species Prevotella oryzae   Less
  species Prevotella oulorum   More
  species Prevotella ruminicola   More
  species Prevotella saccharolytica   Less
  species Prevotella salivae   Less
  species Prevotella sp. oral taxon 299   More
  species Priestia megaterium   More
  species Prochlorococcus marinus   More
  species Prosthecobacter debontii   Less
  species Proteiniphilum acetatigenes   More
  species Proteus penneri   More
  species Proteus vulgaris   More
  species Providencia burhodogranariea   Less
  species Providencia heimbachae   More
  species Providencia rettgeri   More
  species Providencia sneebia   Less
  species Pseudoalteromonas haloplanktis   More
  species Pseudoalteromonas phenolica   More
  species Pseudodesulfovibrio piezophilus   Less
  species Pseudomonas aeruginosa   Less
  species Pseudomonas amygdali   Less
  species Pseudomonas chlororaphis   Less
  species Pseudomonas fluorescens   More
  species Pseudomonas monteilii   Less
  species Pseudomonas parafulva   Less
  species Pseudomonas psychrophila   Less
  species Pseudomonas putida   Less
  species Pseudomonas resinovorans   Less
  species Pseudomonas syringae   Less
  species Pseudomonas viridiflava   Less
  species Pseudomonas xanthomarina   Less
  species Pseudopedobacter saltans   More
  species Psychrobacter adeliensis   Less
  species Psychroflexus salarius   Less
  species Psychroflexus torquis   More
  species Rahnella sp. Y9602   Less
  species Ralstonia pickettii   Less
  species Raoultella ornithinolytica   Less
  species Rheinheimera baltica   More
  species Rhodoferax ferrireducens   More
  species Rhodovulum sulfidophilum   More
  species Rickettsia felis   More
  species Rickettsia montanensis   More
  species Riemerella anatipestifer   More
  species Rikenella microfusus   More
  species Robiginitalea biformata   More
  species Roseburia faecis   Less
  species Roseburia intestinalis   Less
  species Roseburia inulinivorans   Less
  species Roseomonas mucosa   Less
  species Rossellomorea marisflavi   Less
  species Rubellimicrobium aerolatum   Less
  species Rubinisphaera brasiliensis   More
  species Rubrivivax gelatinosus   More
  species Rudaea cellulosilytica   Less
  species Rudanella lutea   More
  species Ruminiclostridium cellulolyticum   More
  species Ruminococcus bromii   Less
  species Ruminococcus callidus   Less
  species Ruminococcus champanellensis   More
  species Saccharicrinis fermentans   More
  species Salinibacter ruber   More
  species Salinicoccus hispanicus   Less
  species Salmonella bongori   More
  species Sarcina ventriculi   Less
  species Schaalia odontolytica   Less
  species Schaalia radingae   Less
  species Sebaldella termitidis   More
  species Sediminibacterium salmoneum   Less
  species Sediminispirochaeta smaragdinae   Less
  species Segetibacter koreensis   More
  species Selenomonas ruminantium   More
  species Selenomonas sputigena   More
  species Serratia sp. ATCC 39006   More
  species Shewanella pealeana   Less
  species Shewanella violacea   Less
  species Shigella boydii   More
  species Shigella flexneri   More
  species Shigella genomosp. SF-2015   More
  species Shigella sonnei   More
  species Singulisphaera acidiphila   Less
  species Sinorhizobium fredii   More
  species Slackia exigua   More
  species Slackia heliotrinireducens   More
  species Slackia isoflavoniconvertens   Less
  species Sodalis glossinidius   More
  species Solibacillus silvestris   Less
  species Solitalea canadensis   More
  species Sphaerobacter thermophilus   Less
  species Sphaerochaeta globosa   Less
  species Sphaerochaeta pleomorpha   Less
  species Sphingobacterium multivorum   Less
  species Sphingobacterium sp. 21   More
  species Sphingomonas asaccharolytica   Less
  species Sphingomonas jaspsi   Less
  species Sphingomonas mali   Less
  species Sphingomonas roseiflava   Less
  species Spiroplasma diminutum   More
  species Spiroplasma platyhelix   Less
  species Spiroplasma syrphidicola   Less
  species Spiroplasma taiwanense   More
  species Spirulina major   More
  species Sporomusa malonica   More
  species Staphylococcus intermedius   More
  species Staphylococcus pseudintermedius   Less
  species Stella humosa   Less
  species Stenotrophomonas terrae   Less
  species strain NLEP 97-1090   More
  species strain SL-HP   More
  species Streptococcus alactolyticus   Less
  species Streptococcus constellatus   More
  species Streptococcus infantarius   More
  species Streptococcus intermedius   More
  species Streptococcus macedonicus   More
  species Streptococcus oralis   Less
  species Streptococcus pasteurianus   Less
  species Streptococcus salivarius   Less
  species Streptosporangium roseum   More
  species Subdoligranulum variabile   More
  species Succinivibrio dextrinosolvens   Less
  species Sulfurovum sp. NBC37-1   More
  species Sutcliffiella horikoshii   Less
  species Sutterella sanguinus   More
  species Suttonella ornithocola   More
  species Symbiobacterium thermophilum   More
  species Synechococcus elongatus   More
  species Synechococcus sp. MINSyn016-15m-01 substr. AC6A1   More
  species Syntrophomonas palmitatica   More
  species Syntrophomonas wolfei   More
  species Syntrophotalea acetylenica   Less
  species Syntrophotalea carbinolica   More
  species Tannerella forsythia   More
  species Taylorella asinigenitalis   More
  species Tepidanaerobacter acetatoxydans   More
  species Tepidimonas arfidensis   Less
  species Terrisporobacter mayombei   More
  species Tetragenococcus halophilus   More
  species Thermacetogenium phaeum   More
  species Thermicanus aegyptius   Less
  species Thermoanaerobacter sp. X514   Less
  species Thermoanaerobacterium xylanolyticum   More
  species Thermobaculum terrenum   Less
  species Thermocrinis albus   More
  species Thermodesulfatator indicus   More
  species Thermodesulfovibrio aggregans   Less
  species Thermodesulfovibrio islandicus   Less
  species Thermodesulfovibrio yellowstonii   More
  species Thermus aquaticus   More
  species Thioalkalivibrio sulfidiphilus   Less
  species Thiobacillus denitrificans   Less
  species Thiofaba tepidiphila   Less
  species Tolumonas auensis   Less
  species Treponema berlinense   Less
  species Treponema denticola   More
  species Treponema primitia   More
  species Trichococcus flocculiformis   Less
  species Trichodesmium erythraeum   Less
  species Truepera radiovictrix   Less
  species Tsuneonella dongtanensis   More
  species Ureaplasma parvum   More
  species Vagococcus carniphilus   Less
  species Vagococcus lutrae   Less
  species Vagococcus teuberi   Less
  species Variovorax paradoxus   More
  species Veillonella atypica   Less
  species Veillonella dispar   More
  species Veillonella tobetsuensis   More
  species Verrucomicrobium spinosum   More
  species Vibrio parahaemolyticus   More
  species Vibrio tasmaniensis   More
  species Viridibacillus arvi   Less
  species Vogesella indigofera   Less
  species Weeksella virosa   More
  species Weissella confusa   Less
  species Weissella koreensis   Less
  species Weissella minor   Less
  species Weissella paramesenteroides   Less
  species Wigglesworthia glossinidia   Less
  species Xenorhabdus nematophila   More
  species Xylella fastidiosa   More
  species Zeaxanthinibacter enoshimensis   Less
  species Zunongwangia profunda   Less
  species Zymomonas mobilis   More
  subspecies Ruminiclostridium cellobioparum subsp. termitidis   More

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