Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank	Bacteria	BiomeSight 1415 Samples	Thryve 1124 Samples	uBiome 814 Samples	SequentiaBiotech 36 Samples	CosmosId 34 Samples	custom 23 Samples	Microba 18 Samples	AmericanGut 18 Samples	BiomeSightRdp 12 Samples	Medivere 7 Samples	es-xenogene 4 Samples
biotype	Haemophilus influenzae aegyptius						1
biotype	Mycobacterium tuberculosis variant caprae	1
biotype	Mycobacterium tuberculosis variant pinnipedii	135
clade							1
clade										1
clade	50 kb inversion clade	391	11		2						3	1
clade	Amniota						1			1
clade	ant endosymbionts	356									6	4
clade	ant, tsetse, mealybug, aphid, etc. endosymbionts	366		1							6	4
clade	aphid secondary symbionts	18										1
clade	asterids			18						1
clade	Bacteria candidate phyla			199		5	1					3
clade	Bacteroidetes/Chlorobi group	1410	1109	790	36	33	22	17	18	12	7	4
clade	Bilateria	293	8	11	1		1			2	1	4
clade	Boreoeutheria						1			1
clade	Caldiserica/Cryosericota group	1	5									1
clade	campanulids									1
clade	Candidatus Baumannia											1
clade	Candidatus Dependentiae											3
clade	Candidatus Uzinura											1
clade	core chlorophytes									1
clade	core genistoids	392	11		2						3	1
clade	Cyanobacteria/Melainabacteria group	1322	767	31	18		8		7	6	7	4
clade	Deuterostomia	5					1			1		1
clade	Dicondylia	162	7	11	1					2	1	4
clade	Dipnotetrapodomorpha	5					1			1		1
clade	Ditrysia									1
clade	dothideomyceta						1
clade	Ecdysozoa	162	7	11	1					2	1	4
clade	Embryophyta	394	11	18	2					1	3	1
clade	eudicotyledons	394	11	18	2					1	3	1
clade	Eumetazoa	320	8	11	1		1			2	1	4
clade	Euphyllophyta	394	11	18	2					1	3	1
clade	Euteleostomi	5					1			1		1
clade	Eutheria						1			1
clade	fabids	391	11		2						3	1
clade	FCB group	1410	1109	790	36	33	22	18	18	12	7	4
clade	genistoids sensu lato	391	11		2						3	1
clade	Gnathostomata	5					1			1		1
clade	Gunneridae	394	11	18	2					1	3	1
clade	Heliantheae alliance									1
clade	lamiids			18
clade	leotiomyceta						1				1
clade	lice endosymbionts			1
clade	Lophotrochozoa	265	1									1
clade	Luna-1 subcluster		3	1								3
clade	Mandibulata	162	7	11	1					2	1	4
clade	mealybug secondary endosymbionts											1
clade	Mesangiospermae	394	11	18	2					1	3	1
clade	Metamonada			1
clade	Methanomada group	381	232	220	16	3	4	1	11	8	7
clade	Nitrospinae/Tectomicrobia group	4	5
clade	Obtectomera									1
clade	OM182 clade			1
clade	OMG group			1
clade	Opisthokonta	320	8	11	1		4		13	2	6	4
clade	Panarthropoda	162	7	11	1					2	1	4
clade	Pancrustacea	162	7	11	1					2	1	4
clade	Patescibacteria group											1
clade	Pentapetalae	394	11	18	2					1	3	1
clade	Protostomia	288	8	11	1					2	1	4
clade	PVC group	1306	1014	567	29	16	16	8	14	12	5	4
clade	Rhizaria						2			2
clade	rosids	391	11		2						3	1
clade	saccharomyceta						4				6
clade	Sar			2			2			2
clade	SAR116 cluster											1
clade	sordariomyceta						1
clade	Spermatophyta	394	11	18	2					1	3	1
clade	Spiralia	265	1									1
clade	Stenosarchaea group	13	8	10			1
clade	Stramenopiles			2
clade	sulfur-oxidizing symbionts			1								1
clade	TACK group	14	5				1
clade	Teleostomi	5					1			1		1
clade	Terrabacteria group	1410	1109	792	36	33	22	18	18	12	7	4
clade	Tetrapoda	5					1			1		1
clade	Theria						1			1
clade	Tracheophyta	394	11	18	2					1	3	1
clade	Vertebrata	5					1			1		1
class							1
class							1
class	Acidimicrobiia	171	373	2			3				3	1
class	Acidithiobacillia		36				1					1
class	Acidobacteriia	242	692	111			2			2	2	4
class	Actinomycetia	1400	1111	785	35	33	19	16	17	12	7	4
class	Agaricomycetes						1
class	algae						2			2
class	Alphaproteobacteria	1374	1087	437	32	4	8	11	7	12	7	4
class	Amphibia	5										1
class	Anaerolineae	593	230	9			1			5	7	4
class	Anthozoa	36										1
class	Aquificae	8	63				3			4		4
class	Archaeoglobi		1
class	Ardenticatenia		18				3					1
class	Armatimonadia		1
class	Bacilli	1411	1154	786	36	32	19	17	18	12	7	4
class	Bacteroidia	1411	1154	790	36	33	22	17	18	12	7	4
class	Balneolia	59	575		7		2			3
class	Betaproteobacteria	1407	1145	747	36	31	18	14	18	12	7	4
class	Bivalvia	197	1
class	Blastocatellia		127	1						1		3
class	Caldilineae	464	312				2			5	7	3
class	Caldisericia	1	5									1
class	Calditrichia	270	10								7	1
class	Candidatus Babeliae											3
class	Candidatus Brocadiia	11										1
class	Chitinispirillia		13							2
class	Chitinivibrionia		2
class	Chitinophagia	659	881	5		5	1		1	9	6	4
class	Chlamydiia	129	124				1			1	1	1
class	Chlorobia	1148	78	1			1			2	2	4
class	Chloroflexia	2	57	2	14		1					1
class	Chlorophyceae									1
class	Chrysiogenetes	240	17				1			1		1
class	Chthonomonadetes	5	102									3
class	Clostridia	1411	1154	792	36	33	22	17	18	12	7	4
class	Conoidasida						1
class	Coprothermobacteria	12	53	7
class	Coriobacteriia	1397	1148	786	36	33	13	13	18	12	7	4
class	Cytophagia	1362	974	7	12		4			9	6	4
class	Deferribacteres	349	95	1			1			1	4	4
class	Dehalococcoidia	91	218	1		1	1			2		4
class	Deinococci	890	238	7	13		1			7	7	4
class	Deltaproteobacteria	1395	1105	646	33	19	17	13	14	12	7	4
class	Dictyoglomia		78			2						1
class	Dothideomycetes						1
class	Elusimicrobia	7	81	7	19				3	6	7	1
class	Endomicrobia											1
class	Epsilonproteobacteria	774	511	266	10	3	2		7	8	7	4
class	Erysipelotrichia	1408	1153	785	36	32	14	11	17	12	7	4
class	Eurotiomycetes						1				1
class	Fibrobacteria	112	255	186			2					1
class	Fimbriimonadia	2	27									1
class	Flavobacteriia	1235	595	458	12	3	7	1	2	5	7	4
class	Florideophyceae								10
class	Fusobacteriia	719	655	144	7	4	2	2	2	5	6	4
class	Gammaproteobacteria	1408	1152	720	36	31	12	15	18	12	7	4
class	Gastropoda	96	1									1
class	Gemmatimonadetes	8	47	1	15		1			5	7	1
class	Gloeobacteria		9				1			1		1
class	Halobacteria	3	1				1
class	Holophagae	654	607				2			6
class	Hydrogenophilalia	700	238	6			1			1	1
class	Ignavibacteria	37	735	2	16		2			6		4
class	Insecta	162	7	11	1					2	1	4
class	Ktedonobacteria	128	15				1				3
class	Lentisphaeria		287	283	6	2	3	1	5	6		1
class	Limnochordia		1									1
class	Magnoliopsida	394	11	18	2					1	3	1
class	Malgrandaviricetes									1
class	Mammalia						1			1
class	Methanobacteria	381	236	220	16	3	4	1	11	8	7
class	Methanococci						1
class	Methanomicrobia	10	7	10			1
class	Methylacidiphilae	12				1						1
class	Mollicutes	1360	1009	167	25	1	5		2	11	6	4
class	Negativicutes	1406	1154	792	34	33	20	16	17	12	7	4
class	Nitriliruptoria	794	55				3			1		1
class	Nitrososphaeria	7	1
class	Nitrospinia	4	5
class	Nitrospira	264	50	1			1				6	4
class	Oligoflexia	23	93	1		1	1			1	1	4
class	Oligosphaeria		40	1
class	Opitutae	849	415	96	1	1	2			5	4	4
class	Phycisphaerae		2				1					4
class	Pisoniviricetes					1
class	Planctomycetia	17	105	1			1					4
class	Rhodothermia	105	29							1
class	Rubrobacteria	10	105				3			2		3
class	Saccharomycetes						4				6
class	Saprospiria	68	159									4
class	Solibacteres		31	1
class	Sordariomycetes						1
class	Spartobacteria	23	52
class	Sphingobacteriia	1411	617	18	26		5		4	10	7	4
class	Spirochaetia	616	190	16			4			6	1	4
class	Synergistia	1051	431	236	1	1	3	1	1	8	7	4
class	Thermoanaerobaculia		77
class	Thermococci	3	1				1
class	Thermodesulfobacteria	138	31							1	2	1
class	Thermodesulfovibrionia Umezawa et al. 2021	124	2
class	Thermoflexia		4
class	Thermoleophilia	20	88							1
class	Thermolithobacteria		50
class	Thermomicrobia		18							2		1
class	Thermoplasmata		33	36			1	1
class	Thermoprotei	7
class	Thermotogae	47	36				1				6	4
class	Tissierellia	1395	1102	512	14	10	5		8	12	7	4
class	Tremellomycetes						1		13
class	unclassified Cyanobacteria											1
class	Verrucomicrobiae	1216	1005	492	26	15	14	8	13	12	3	4
class	Vicinamibacteria											1
class	Zetaproteobacteria		32	1			1					1
cohort	Endopterygota									1		3
cohort	Paraneoptera	157	2	11						2		1
cohort	Polyneoptera	7	7		1						1
family		1
family	'Williamsiaceae'	2
family	Acanthopleuribacteraceae		57
family	Acaryochloridaceae		3
family	Acetobacteraceae	458	345	2	1	1	1			1	3	4
family	Acholeplasmataceae	1278	737	19	15		2			6	6	4
family	Acidaminococcaceae	1293	1063	565	22	22	10	12	13	8	7	4
family	Acidiferrobacteraceae		16									4
family	Acidimicrobiaceae	171	361				2				3	1
family	Acidithiobacillaceae		36				1					1
family	Acidobacteriaceae	241	177	87			1			2	2	4
family	Acidothermaceae		46									1
family	Actinomycetaceae	1124	1009	634	24	28	6	1	8	12	7	4
family	Actinopolymorphaceae	89	1									1
family	Actinopolysporaceae	282	191							4		1
family	Aerococcaceae	593	943	80		2	3		1	10	7	4
family	Aeromonadaceae	322	229	7	4	1	1		3	1	2	4
family	Akkermansiaceae	1240	1054	811	36	28	16	15	18	10	4	4
family	Alcaligenaceae	1393	204	6	10		3		1	2	7	4
family	Alcanivoracaceae	165	20				1					1
family	Algiphilaceae		42
family	Alicyclobacillaceae	2	390		7		3			6		4
family	Alsobacteraceae		2
family	Alteromonadaceae	467	448				1	1	2	1		4
family	Amaranthaceae	4
family	Amoebophilaceae	1255	3				1				5	1
family	Anaerolineaceae	243	229	8			1			5		4
family	Anaeromyxobacteraceae	1	618			1	1					1
family	Anaeroplasmataceae	139	415	128	3		1		2	4	2
family	anamorphic Herpotrichiellaceae						1
family	Anaplasmataceae	359	22			1	1			2	2	4
family	Aphanizomenonaceae	940	3							1	7	4
family	Aphanothecaceae		3				1					1
family	Aphididae	3								2
family	Aquificaceae	8	30				2			4		3
family	Archaeoglobaceae		1
family	Archangiaceae	52	82				1					1
family	Arcobacteraceae Waite et al. 2017	76	20	1			1				1	4
family	Ardenticatenaceae		18				3					1
family	Armatimonadaceae		1
family	Aspergillaceae						1				1
family	Asteraceae									1
family	Atopobiaceae	530	722	165	10	4	1			7	3	4
family	Aurantimonadaceae	18	16				1					1
family	Azonexaceae	127	23				1			1
family	Azospirillaceae	715	531	1	2		1	3		7	2	4
family	Babyloniidae	1
family	Bacillaceae	1299	853	232	31	3	5		12	11	7	4
family	Bacillales Family X. Incertae Sedis	1402	554				3			6	7
family	Bacillidae	7	6		1						1
family	bacterial virus						1
family	Bacteriovoracaceae	8	49	1		1						1
family	Bacteroidaceae	1411	1154	784	35	33	22	17	18	12	7	4
family	Balneatrichaceae		14
family	Balneicellaceae							11
family	Balneolaceae	60	571		1		2			3
family	Barnesiellaceae		968	513	11	17	8	8	18	9		4
family	Bartonellaceae	40	11				1					4
family	Bdellovibrionaceae	15	10				1			1	1	1
family	Beijerinckiaceae	44	9									4
family	Bernardetiaceae		112				2					1
family	Beutenbergiaceae											1
family	Bifidobacteriaceae	1397	1154	812	36	32	20	17	18	12	7	4
family	Blastocatellaceae		18	1						1
family	Blastochloridaceae	5										1
family	Blastocystidae			2
family	Blattabacteriaceae						1					4
family	Bogoriellaceae	11	42					3
family	Borreliaceae	17	2				1					4
family	Boseaceae		7	1			1					4
family	Brachyspiraceae	23		13			1					4
family	Bradymonadaceae											1
family	Bradyrhizobiaceae	51	56	11			1		1	1	1	4
family	Breoghaniaceae											1
family	Brevibacteriaceae	106	103	60			1		1		7	4
family	Brevinemataceae		5							1
family	Brucellaceae	131	42	25	4		1		1	3		4
family	Bruguierivoracaceae Li et al. 2021	5	26				1					4
family	Bryobacteraceae		19				1
family	Budviciaceae		272				1	12		1		4
family	Burkholderiaceae	1254	378	27	17		3	1	3	10	7	4
family	Caedimonadaceae											1
family	Caldicoprobacteraceae		36	236
family	Caldilineaceae	465	310				2			5	7	3
family	Caldisericaceae		5									1
family	Calditrichaceae	270	10								7	1
family	Caliciviridae					1
family	Calotrichaceae	569	100				1				6	4
family	Campylobacteraceae	571	427	265	7	3	2		7	6	7	4
family	Candidatus Babeliaceae											3
family	Candidatus Brocadiaceae	11										1
family	Candidatus Competibacteraceae		162				2			1
family	Candidatus Desulfofervidaceae											1
family	Candidatus Methanomethylophilaceae			23
family	Candidatus Midichloriaceae			1								1
family	Candidatus Nanopelagicaceae						1					3
family	Candidatus Paracaedibacteraceae				1
family	Candidatus Scalinduaceae Lodha et al. 2021	11
family	Canidae									2
family	Cardiobacteriaceae	30	153	2			1					1
family	Carnobacteriaceae	899	663	325	5	13	5	1	3	8	7	4
family	Catabacteriaceae		161	99	1	1		1		8	6
family	Catalimonadaceae		46
family	Catenulisporaceae		3									4
family	Caulobacteraceae	650	155	9			1		4	5	1	4
family	Celerinatantimonadaceae		6
family	Cellulomonadaceae	90	101			4	1					4
family	Cellvibrionaceae	97	78				1					4
family	Cenarchaeaceae DeLong and Preston 1996	2
family	Cesiribacteraceae		44
family	Chamaesiphonaceae		5									3
family	Chelatococcaceae	4	3									1
family	Chitinispirillaceae		13							2
family	Chitinivibrionaceae		2
family	Chitinophagaceae	664	881	5		5	1		1	9	6	4
family	Chlamydiaceae	1	2				1					1
family	Chlorobiaceae	1148	78				1			2	2	4
family	Chloroflexaceae		2	2								1
family	Chlorogloeopsidaceae		10
family	Christensenellaceae		258	180	24	26	3		14	10	7	4
family	Chromatiaceae	1156	550	2	1		3			4	6	4
family	Chromobacteriaceae	194	103				1				1	4
family	Chroococcaceae	571	2								2	1
family	Chroococcidiopsidaceae	1					1					1
family	Chrysiogenaceae	244	17				1			1		1
family	Chthoniobacteraceae	23	12
family	Chthonomonadaceae	5	102									3
family	Clostridiaceae	1410	1154	788	36	33	20	15	17	12	7	4
family	Clostridiales Family XI. Incertae Sedis			217
family	Clostridiales Family XVI. Incertae Sedis	794	37				4			3	2	1
family	Clostridiales Family XVII. Incertae Sedis	53	114			1	1			7	2	4
family	Coccidae	125								3
family	Coelosphaeriaceae	32
family	Cohaesibacteraceae		1									1
family	Coleofasciculaceae	11	3
family	Colwelliaceae	4	174				1			2		4
family	Comamonadaceae	1248	220	111	3		2		9	5	6	4
family	Conexibacteraceae	6	8
family	Coprobacillaceae Verbarg et al. 2014	1393	870	393	5	28	5		11	5	7
family	Coprothermobacteraceae	12	53	7
family	Coriobacteriaceae	1401	1021	781	34	24	7		18	11	7	4
family	Corynebacteriaceae	701	645	445	8	13	2	2	7	10	1	4
family	Coxiellaceae	34	42	2			1				1	1
family	Crenotrichaceae	3
family	Criblamydiaceae		43
family	Crocinitomicaceae		28		3		1					1
family	Cryomorphaceae		95	1								1
family	Cryptococcaceae								13
family	Cryptosporangiaceae	1
family	Cryptosporidiidae						1
family	Cyanobacteriaceae	225	33								1
family	Cyanobacteriaceae	226	33								1
family	Cyanobiaceae Salazar et al., 2020	3	5	1			1					4
family	Cyanothecaceae											1
family	Cyclobacteriaceae		314				1					4
family	Cytophagaceae	1291	779	3	4		1			5	6	4
family	Debaryomycetaceae						1
family	Deferribacteraceae	351	108	1			1			1	4	4
family	Defluviitaleaceae		279	18	3		3			9
family	Dehalococcoidaceae	91	60			1	1			1		1
family	Deinococcaceae	665	158	6	1		1			2	4	4
family	Demequinaceae	8	67							1
family	Dermabacteraceae	243	80	55			1	1		1		4
family	Dermacoccaceae	11	30	2		1	1		1			1
family	Dermatophilaceae	1	9									1
family	Dermocarpellaceae											1
family	Desulfallaceae Watanabe et al. 2020	608	220				3			1	7	1
family	Desulfarculaceae		236									1
family	Desulfobacteraceae	326	647	2	2		7			7	2	4
family	Desulfobulbaceae	19	118		1		1					1
family	Desulfocapsaceae	12	16				1					1
family	Desulfohalobiaceae	255	70								7	3
family	Desulfomicrobiaceae	87	275				1			7		4
family	Desulfonatronaceae	278	43								2
family	Desulfovibrionaceae	1357	1010	646	32	19	13	13	14	12	7	4
family	Desulfurellaceae	5	10									1
family	Desulfurobacteriaceae		15									1
family	Desulfurococcaceae	1
family	Desulfuromonadaceae	697	109				3			1	5	4
family	Devosiaceae	444	66						1	1		4
family	Diapheromeridae		1
family	Dictyoglomaceae		78			2						1
family	Dientamoebidae			1
family	Dietziaceae	79	146	2				2				1
family	Dysgonomonadaceae	1137	719	46	4		7		2	7	7	4
family	Ectothiorhodospiraceae	947	260	1			3			7	2	4
family	Edwardsiidae	36										1
family	Eggerthellaceae	1384	1120	774	35	33	13	13	14	12	7	4
family	Egibacteraceae											1
family	Egicoccaceae											1
family	Elioraeaceae		3
family	Elusimicrobiaceae	7	62	7					3	1		1
family	Emcibacteraceae		135
family	Endomicrobiaceae											1
family	Endozoicomonadaceae		6									1
family	Enterobacteriaceae	1356	709	593	32	28	10	15	17	12	7	4
family	Enterococcaceae	1291	387	140	28	27	7	5	11	8	4	4
family	Entomoplasmataceae	634	81				1			3	2	4
family	Eriococcidae		1	11
family	Erwiniaceae	347	365	176	4		2		11	1	2	4
family	Erysipelotrichaceae	1408	1153	785	36	32	13	11	17	12	7	4
family	Erythrobacteraceae	106	49	2			1		1			4
family	Eubacteriaceae	1404	1154	299	36	33	13	14	13	12	7	4
family	Eubacteriales Family XII. Incertae Sedis	387	625	18			6			8	6
family	Eubacteriales Family XIII. Incertae Sedis	1180	1068	656	31	17	4	1	12	12	7	4
family	Euzebyaceae	793	49				1			1		1
family	Fabaceae	391	11		2						3	1
family	Fastidiosibacteraceae		15
family	Faucheaceae								10
family	Ferrimonadaceae	12	42									1
family	Ferrovaceae		2
family	Fervidobacteriaceae	16	1				1				1	4
family	Fibrobacteraceae	112	243	140			2					1
family	Fimbriimonadaceae	2	27									1
family	Flammeovirgaceae	317	381	1			3			1		4
family	Flavobacteriaceae	1235	530	455	3	1	7		2	5	7	4
family	Flexibacteraceae		8	1	2					1
family	Fortieaceae		15
family	Francisellaceae	62	76	2			2				1	4
family	Frankiaceae	2	6				1					4
family	Fulvivirgaceae	7	154				2			1		4
family	Fusobacteriaceae	655	560	121	7	4	1	2	2	4	6	4
family	Gaiellaceae		41				2
family	Gallionellaceae	173	29				1		2			1
family	Geminicoccaceae		50							2
family	Gemmataceae	9	15	1			1					1
family	Gemmatimonadaceae	8	31	1			1					1
family	Geobacteraceae	87	69				5				1	4
family	Geodermatophilaceae	12	104	1						1		4
family	Gloeobacteraceae		9				1			1		1
family	Gloeotrichiaceae	3
family	Glycomycetaceae	65	148							1	1	1
family	Gomontiellaceae		94							2		1
family	Gomphosphaeriaceae	33
family	Gordoniaceae	55	82	1			1					4
family	Gottschalkiaceae		139				4			3		4
family	Gracilibacteraceae		487	9	3		3			7
family	Granulosicoccaceae		79									1
family	great apes						1
family	Hafniaceae	76	55	14	2		4			1		1
family	Hahellaceae	160	203				2			1		3
family	Halanaerobiaceae	290	240	1			3			7	2	4
family	Halieaceae		63				1					1
family	Haliscomenobacteraceae	1	86									3
family	Haloarculaceae		1
family	Halobacteriaceae	3	1				1
family	Halobacteriaceae Clade I						1
family	Halobacteriovoraceae	7	34				1					4
family	Halobacteroidaceae	44	393				3			3	4	1
family	Haloferacaceae	1					1
family	Halomonadaceae	510	480		2	1	4			2	3	4
family	Haloplasmataceae		34	1						2
family	Halorubraceae	2
family	Halothiobacillaceae	18	106				2
family	Hapalosiphonaceae											1
family	Helicobacteraceae	405	45	3			1			1	1	4
family	Heliobacteriaceae	618	211		4		2	4		7	5	1
family	Herpetosiphonaceae	1	5
family	Hesperiidae									1
family	Heteroleibleiniaceae		14
family	Holophagaceae	654	563				2			5
family	Holosporaceae					1						3
family	Hungateiclostridiaceae	592	726	142	35	7	2	6		8	6	4
family	Hydrogenophilaceae	704	245	5			1			1	1
family	Hydrogenothermaceae		25							1		1
family	Hyellaceae											1
family	Hymenobacteraceae	944	210	2			1			6	1	4
family	Hyphomicrobiaceae	639	109				1		1	1	5	4
family	Hyphomonadaceae	82	594	1			1			5	3	2
family	Iamiaceae		22
family	Ichthyobacteriaceae											1
family	Idiomarinaceae	53	27				1			1		1
family	Ignavibacteriaceae	37	45	1								1
family	Ilumatobacteraceae		91
family	Immundisolibacteraceae											3
family	Intrasporangiaceae	51	66				1					4
family	Isosphaeraceae	7	5	1								4
family	Jatrophihabitantaceae		6									1
family	Jiangellaceae	17	8								1	4
family	Jonesiaceae	27	111
family	Kaistiaceae	10	36							1
family	Kallotenuaceae		16
family	Kangiellaceae		38									1
family	Kiloniellaceae	325	479		5					2
family	Kineosporiaceae	15	66							1		1
family	Kofleriaceae	118	27									3
family	Kordiimonadaceae		154
family	Kosmotogaceae	11	12				1					1
family	Kribbellaceae	71	288								5
family	Ktedonobacteraceae		1
family	Kytococcaceae	1		2								1
family	Labilitrichaceae		36
family	Lachnospiraceae	1411	1154	791	36	33	22	17	18	12	7	4
family	Lacipirellulaceae		6
family	Lactobacillaceae	1373	1154	813	36	30	12	12	18	12	7	4
family	Lawsonellaceae				1
family	Legionellaceae	919	71	1			1			5	3	4
family	Lentisphaeraceae		4
family	Leptolyngbyaceae	320	3	1			1				2	4
family	Leptospiraceae	376	59				4			2		4
family	Leptotrichiaceae	165	206	38			2			1	1	4
family	Leuconostocaceae	1103	1036	102	9	3	1	5	2	8	6	4
family	Lewinellaceae	66	8
family	Limnochordaceae		1									1
family	Listeriaceae	939	262	1		1	1		4	3	1	4
family	Litoricolaceae	87	38								3
family	Luteibaculaceae Bowman 2020		1
family	Magnetococcaceae		18				1					1
family	Maricaulaceae	10	32									1
family	Marinifilaceae		289				1			4		4
family	Marinilabiliaceae		574	1	7					6		1
family	Marinobacteraceae Liao et al. 2020	72	159				1	1				4
family	Mariprofundaceae		32	1			1					1
family	Marivirgaceae		2				2					1
family	Melioribacteraceae		727		16		2			6		4
family	Merismopediaceae				3
family	Mesoaciditogaceae		5
family	Methanobacteriaceae	381	231	220	3	3	4	1	11	6	1
family	Methanococcaceae						1
family	Methanocorpusculaceae	4	1	1
family	Methanomassiliicoccaceae		33	31			1	1
family	Methanoregulaceae		2
family	Methanosarcinaceae	7	3				1
family	Methanotrichaceae		1
family	Methylacidiphilaceae	12				1						1
family	Methylobacteriaceae	79	62	4			1					4
family	Methylococcaceae	9	208	1			3					4
family	Methylocystaceae	24	21				1					4
family	Methylophilaceae	614	283				1			1	2	1
family	Methylothermaceae		48
family	Microbacteriaceae	445	633	49			2		3	5	5	4
family	Microbulbiferaceae	7	1				1					4
family	Micrococcaceae	539	587	151	25	22	5		1	4	6	4
family	Microcoleaceae	309	329	1			1			1		4
family	Microcystaceae	6					2					1
family	Micromonosporaceae	410	253	1			1		1	2	6	4
family	Micropepsaceae		13
family	Microscillaceae		142									1
family	Microviridae									1	7
family	Mooreiaceae		10
family	Moraxellaceae	713	546	21	7	4	1	5	5	8	6	4
family	Morganellaceae	209	519	17	17	1	2	1	10	10	7	4
family	Moritellaceae		1				1					1
family	Motilibacteraceae		17
family	Muribaculaceae						2			1		4
family	Mycobacteriaceae	226	103	59		2	1			2	1	4
family	Mycoplasmataceae	1166	791	11	6		2			8	5	4
family	Mycoplasmoidaceae		27
family	Myoviridae						1
family	Myxococcaceae	1	4				1					4
family	Mzabimycetaceae		145
family	Nakamurellaceae		2							1		4
family	Nannocystaceae	93	25								1
family	Natranaerobiaceae		32									1
family	Nautiliaceae	3	33				1			2		1
family	Neisseriaceae	454	196	68	10	5	2	3	3	5	7	4
family	Neomegalonemataceae		22							1
family	Nitratiruptoraceae Waite et al. 2017		1									1
family	Nitriliruptoraceae	5	6				2
family	Nitrosomonadaceae	11	339	8	4		3			3		4
family	Nitrosopumilaceae	1	4				1
family	Nitrososphaeraceae	7	1
family	Nitrospinaceae	4	5
family	Nitrospiraceae	264	50	1			1				5	4
family	Nocardiaceae	138	12	21			1			2	1	4
family	Nocardioidaceae	198	416	1			2				6	4
family	Nocardiopsaceae		319				1		2	1		4
family	Nostocaceae	1201	5		2		1			2	7	4
family	Oceanospirillaceae	360	291				1		1			4
family	Odoribacteraceae	1319	1066	619	33	25	14	14	16	11	7	4
family	Oleiphilaceae											3
family	Oligoflexaceae		1
family	Oligosphaeraceae		40
family	Opitutaceae	8	49			1	1			1		4
family	Orbaceae		5				1					4
family	Ornithinimicrobiaceae	31	20				1					4
family	Oscillatoriaceae	651	123									4
family	Oscillospiraceae	1407	1154	788	36	33	22	17	18	12	7	4
family	Oxalobacteraceae	883	495	258	25	2	3		8	8	7	4
family	Paenibacillaceae	1121	979	1	29		4		6	7	7	4
family	Paludibacteraceae	5	137	1	3		2		2	1		4
family	Parachlamydiaceae	2	3									1
family	Parvibaculaceae		2									4
family	Parvoviridae									2
family	Parvularculaceae		31									1
family	Pasteurellaceae	1150	933	548	29	17	6	6	17	8	7	4
family	Pasteuriaceae	57
family	Patulibacteraceae	1	3
family	Pectobacteriaceae	70	454	2	1		1			1	3	4
family	Pelagibacteraceae		4				1					1
family	Peptococcaceae	1390	1069	520	24	4	6		9	11	7	4
family	Peptoniphilaceae	1369	1071	505	7	9	4		8	12	7	4
family	Peptostreptococcaceae	1255	1149	789	30	31	11	8	15	12	7	4
family	Perlucidibacaceae Liao et al. 2020		3
family	Persicobacteraceae	1	77							1		4
family	Petrotogaceae	16	18				1				6	4
family	phages with long non-contractile tails						1
family	Phreatobacteraceae		1									1
family	Phycisphaeraceae		2									1
family	Phyllobacteriaceae	21	37	35			1		1			4
family	Pirellulaceae Dedysh et al. 2020	3	39									1
family	Piscirickettsiaceae	185	322	2			3		1			4
family	Planctomycetaceae	8	98				1					1
family	Planococcaceae	705	946	39	22		2		6	12	7	4
family	Pleioneaceae		2
family	Pleomorphomonadaceae	5	7									1
family	Polyangiaceae	56	3	1			1			1		4
family	Porphyromonadaceae	1405	1142	524	35	22	6	2	10	12	7	4
family	Porticoccaceae		1
family	Prevotellaceae	1386	1146	568	21	14	20	2	17	12	7	4
family	Prochloraceae	2	2				1					4
family	Prochlorococcaceae			1
family	Prochlorotrichaceae		3									3
family	Prolixibacteraceae		146				1			4		1
family	Promicromonosporaceae	3	51					1	1			4
family	Propionibacteriaceae	59	465	118	13	9	1			4	4	4
family	Proteidae	5										1
family	Proteinivoraceae	1094	477				7			8	7
family	Pseudanabaenaceae	405	3							1	2	4
family	Pseudoalteromonadaceae	32	46				1				1	4
family	Pseudococcidae	35	2									1
family	Pseudomonadaceae	391	409	51	9	2	5		11	3	5	4
family	Pseudonocardiaceae	379	345				1			3	4	4
family	Pseudoxanthobacteraceae		5
family	Psychromonadaceae	16	36									4
family	Puniceicoccaceae	844	393	7			1			5	4	1
family	Pyrinomonadaceae		39
family	Rarobacteraceae		56
family	Reichenbachiellaceae		41
family	Reyranellaceae		5
family	Rhabdochlamydiaceae	120
family	Rhizobiaceae	356	84	8	14		1		1	2	7	4
family	Rhodanobacteraceae	968	212				1			3	3	4
family	Rhodobacteraceae	284	283	4	4	1	1		1	4	7	4
family	Rhodobiaceae	4	7	3								4
family	Rhodocyclaceae	856	376	70			1		1	1		1
family	Rhodospirillaceae	1144	867	370	25		5	11		11	7	4
family	Rhodothalassiaceae	11	14							1
family	Rhodothermaceae	1294	143		6		2			7	1	4
family	Rhodovibrionaceae	296	428		1					8
family	Rickettsiaceae	737	226				1			3	6	4
family	Rikenellaceae	34	1125	733	35	32	16	16	18	10	7	4
family	Rivulariaceae	620	101								6	4
family	Robiginitomaculaceae		43							2
family	Roseiarcaceae		4
family	Roseiflexaceae	1	10									1
family	Roseivirgaceae		44
family	Roseobacteraceae Pujalte et al. 2014	80	51	1			1				2	4
family	Ruaniaceae						1
family	Rubricoccaceae		9
family	Rubritaleaceae	474	160					4		2
family	Rubrobacteraceae	10	70				3			2		3
family	Ruminococcaceae	1411	1154	788	36	28	6	17	18	12	7	4
family	Saccharomycetaceae						4				5
family	Saccharospirillaceae	34	439							1		1
family	Salinibacteraceae		2
family	Salinisphaeraceae		17									1
family	Salinivirgaceae											1
family	Salisaetaceae	279	117				1			4
family	Sandaracinaceae		11									1
family	Sanguibacteraceae	4	2								1	1
family	Saprospiraceae	68	53									1
family	Schleiferiaceae		18									1
family	Scytonemataceae		2									4
family	Sedimentisphaeraceae						1					3
family	Segniliparaceae		33				2					1
family	Selenomonadaceae	1387	650	99	12	5	8			12	7	4
family	Shewanellaceae	880	150				2			2	5	4
family	Simkaniaceae		7									1
family	Sinobacteraceae	1012	145	2			1			1		1
family	Sneathiellaceae		10
family	Solanaceae			11
family	Solibacteraceae	1		1								1
family	Solirubrobacteraceae	12	22
family	Sphaerobacteraceae		29							1
family	Sphaerochaetaceae	3	2				1					1
family	Sphingobacteriaceae	1409	617	4	24		5		4	10	7	4
family	Sphingomonadaceae	504	616	17	14		2		1	7	6	4
family	Sphingosinicellaceae		9							1		4
family	Spirillaceae		4		14
family	Spirochaetaceae	339	121				1			3	1	4
family	Spiroplasmataceae		378				1			6		4
family	Spirosomaceae	1124	638		2		3			4	6	4
family	Spirulinaceae		9
family	Spongiibacteraceae		184							1		1
family	Sporichthyaceae	4	19
family	Sporolactobacillaceae	434	158				2				1	1
family	Sporomusaceae	938	781	34			3			5	7	4
family	Staphylinidae									1		3
family	Staphylococcaceae	1095	345	207	3	3	6	5	5	7	5	4
family	Stappiaceae		2				1					4
family	Stellaceae		198							1
family	Steroidobacteraceae	14	32
family	Sterolibacteriaceae	216	63	11			1					4
family	Streptococcaceae	1401	1151	774	36	32	16	13	16	12	7	4
family	Streptomycetaceae	265	222		2		1		2		6	4
family	Streptosporangiaceae	551	168				1				2	1
family	Succinivibrionaceae	375	276	15		2	1		3
family	Sulfolobaceae	5
family	Sulfuricellaceae Watanabe et al. 2014		6				1					1
family	Sulfurovaceae Waite et al. 2017		5				1					1
family	Sutterellaceae	1389	1136	713	36	29	17	13	18	12	7	3
family	Symbiobacteriaceae	858	289				3			7		3
family	Synechococcaceae	407	8	1			1					4
family	Synergistaceae	1045	431	236	1	1	3	1	1	8	7	4
family	Syntrophaceae	204	61				1			1	1	4
family	Syntrophobacteraceae	433	412				2			1	2	1
family	Syntrophomonadaceae	1165	498	11			3			4	5	4
family	Syntrophorhabdaceae		35	1
family	Syntrophotaleaceae	11
family	Tannerellaceae	1397	1091	719	34	33	19	15	18	12	7	4
family	Temperatibacteraceae		1
family	Tepidamorphaceae		2
family	Tepidanaerobacteraceae	474	11				1				2	1
family	Terasakiellaceae											1
family	Terrimicrobiaceae		4
family	Thalassobaculaceae	63	3							2
family	Thalassospiraceae	324	34	358						2		1
family	Thermaceae	506	88	1			1			2	5	4
family	Thermoactinomycetaceae	883	564	1			4			4	6	4
family	Thermoanaerobacteraceae	1212	329	212			4			7	4	4
family	Thermoanaerobacterales Family III. Incertae Sedis	1361	173		1		4			9	7	4
family	Thermoanaerobacterales Family IV. Incertae Sedis		34				1
family	Thermoanaerobaculaceae		77
family	Thermococcaceae	3	1				1
family	Thermodesulfobacteriaceae	138	31							1	2	1
family	Thermodesulfobiaceae	13	67	17	5		2			2		1
family	Thermodesulfovibrionaceae	257	15								6	3
family	Thermoflexaceae		4
family	Thermoflexibacteraceae		106
family	Thermogemmatisporaceae	128	7								3
family	Thermoguttaceae Dedysh et al. 2020		39									1
family	Thermohalobacteraceae Spring 2020		852		4		4			8
family	Thermoleophilaceae		38							1
family	Thermolithobacteraceae		50
family	Thermomicrobiaceae											1
family	Thermomonosporaceae	405	65				1			1	3	4
family	Thermonemataceae		21							4
family	Thermoproteaceae	1
family	Thermosediminibacteraceae	93	54								6	1
family	Thermosporotrichaceae		8
family	Thermosynechococcaceae											1
family	Thermotogaceae	48	1				1				6	4
family	Thermotomaculaceae		15							1
family	Thioalkalibacteraceae	10	1
family	Thioalkalispiraceae		53	1								3
family	Thiobacillaceae	239	61	6							1	1
family	Thiofilaceae		3
family	Thiolinaceae		2
family	Thioprofundaceae		6
family	Thiotrichaceae	949	75	1					3	2	3	1
family	Thiovulaceae Waite et al. 2017	8	12				1					3
family	Thorselliaceae		54
family	Tissierellaceae	89	513	1	2	1	4			5	3	4
family	Treponemataceae	338	55				1			5	1	4
family	Trichocoleusaceae		2
family	Trichocomaceae										1
family	Tropherymataceae		59									1
family	Trueperaceae		16
family	Tsukamurellaceae	79	3								1	4
family	Turicibacteraceae Verbarg et al. 2014	971	695	474	8	14	6	2	11	9	5	4
family	unclassified Actinobacteria (class) (miscellaneous)											1
family	unclassified Bacillales		19	40
family	unclassified Burkholderiales	200	198	18		15			3		3	4
family	unclassified Clostridiales		719	783	35	30	5	3	1	8		4
family	unclassified Rickettsiales											4
family	Unionidae	198	1
family	Vallitaleaceae Quemeneur et al.		68		3		4			9
family	Veillonellaceae	1410	1147	744	32	28	14	6	16	12	7	4
family	Verrucomicrobia subdivision 3	13	21				2
family	Verrucomicrobiaceae	1213	210	220			3		1	2	3	1
family	Vibrionaceae	93	106				3				4	4
family	Vicinamibacteraceae											1
family	Victivallaceae		282	283	6	2	2		5	6
family	Viviparidae	95	1									1
family	Waddliaceae	7	1
family	Weeksellaceae	67	99	8			1		1	1		4
family	Wenzhouxiangellaceae		34									1
family	Woeseiaceae											1
family	Xanthobacteraceae	26	20				1				6	1
family	Xanthomonadaceae	1145	297	19			4		7	6	6	4
family	Xenococcaceae	1
family	Yersiniaceae	1063	189	20	6		7		13	10		4
family	Zoogloeaceae	332	147	1	1		1		2	1	3	4
family	Zymomonadaceae	1	1									1
forma specialis	Buchnera aphidicola (Acyrthosiphon kondoi)											1
forma specialis	Buchnera aphidicola (Acyrthosiphon pisum)											2
forma specialis	Buchnera aphidicola (Aphis glycines)											1
forma specialis	Buchnera aphidicola (Cinara cedri)											1
forma specialis	Buchnera aphidicola (Cinara confinis)											1
forma specialis	Buchnera aphidicola (Cinara pseudotaxifoliae)											1
forma specialis	Buchnera aphidicola (Cinara tujafilina)											1
forma specialis	Buchnera aphidicola (Diuraphis noxia)											1
forma specialis	Buchnera aphidicola (Myzus persicae)											4
forma specialis	Buchnera aphidicola (Schizaphis graminum)											1
forma specialis	Buchnera aphidicola (Schlechtendalia chinensis)											1
forma specialis	Buchnera aphidicola (Tuberolachnus salignus)											1
forma specialis	Buchnera aphidicola (Uroleucon ambrosiae)											1
forma specialis	cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko											1
forma specialis	endosymbiont of Bathymodiolus septemdierum str. Myojin knoll											1
forma specialis	primary endosymbiont of Heteropsylla cubana											1
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis											1
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina morsitans											4
forma specialis	Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)											3
genus							1
genus							1
genus							1
genus							1
genus							1
genus	'Grimontella'							1
genus	'Haloanella'	2
genus	'Kouleothrix'	1
genus	'Terrahaemophilus'						1
genus	Abiotrophia	85	134	9		2	2			2
genus	Absiella	397	415			12	1			6	1
genus	Abyssivirga						1
genus	Acanthopleuribacter		57
genus	Acaryochloris		3
genus	Accumulibacter											3
genus	Acetanaerobacterium		550	123	1		3			9
genus	Acetatifactor		1040	2		1	3			4
genus	Acetilactobacillus											3
genus	Acetitomaculum		794	138	1		3			3
genus	Acetivibrio	1388	1064	32	26	2	9			9	7	4
genus	Acetoanaerobium		593				4			7		1
genus	Acetobacter	4	17			1	1					3
genus	Acetobacterium	1384	485			2	4			8	7	4
genus	Acetobacteroides		285
genus	Acetohalobium	37	3				1					1
genus	Acetomicrobium	12	38									1
genus	Acetonema		264				2			2
genus	Acholeplasma	978	736	6	1		2			6	3	4
genus	Achromatium	11
genus	Achromobacter	117		1	9		1			1	2	4
genus	Acidaminobacter	335	340				3			6	3
genus	Acidaminococcus	977	586	96	4	1	5		5	5	3	4
genus	Acidianus	1
genus	Acidibacter		47
genus	Acidibrevibacterium											1
genus	Acidicaldus		2
genus	Acidicapsa		66							1
genus	Acidiferrobacter		10									3
genus	Acidihalobacter						1					1
genus	Acidimicrobium	154									1	1
genus	Acidiphilium	36	16								1	1
genus	Acidipropionibacterium	20		1			1					4
genus	Acidisoma	2
genus	Acidisphaera	1										1
genus	Aciditerrimonas		150				2
genus	Acidithiobacillus		36				1					1
genus	Acidobacterium	1										3
genus	Acidocella	2	1
genus	Acidothermus		46									1
genus	Acidovorax	77	39	1			1		1	1	4	4
genus	Acinetobacter	308	299	16	6	4	1	5	5	1	4	4
genus	Acrocarpospora		4
genus	Actibacter		1
genus	Actimicrobium		3
genus	Actinoallomurus	2
genus	Actinoalloteichus		1									4
genus	Actinobacillus	795	285	90	7		4			1	5	4
genus	Actinobaculum	110	8	17		7			2			1
genus	Actinocatenispora	356	104							1
genus	Actinocorallia	3	4								2
genus	Actinokineospora	4									3
genus	Actinomadura	35	37				1				2	1
genus	Actinomyces	1033	905	579	10	27	5		5	10	7	4
genus	Actinomycetospora	7	2
genus	Actinoplanes	10	102				1					4
genus	Actinopolymorpha	89	1									1
genus	Actinopolyspora	282	188							4		1
genus	Actinosynnema											1
genus	Actinotalea	1
genus	Actinotignum	24	62	29						3
genus	Acutalibacter									9
genus	Adhaeribacter		32
genus	Adlercreutzia	1030		537	5	26	6	1	6	2	6	1
genus	Advenella		5				1					3
genus	Aequorivita	1	9		2							1
genus	Aeribacillus		27							1		1
genus	Aeriscardovia		169
genus	Aerococcus	25	325	16			1			2		4
genus	Aeromicrobium	12	3	1							3	1
genus	Aeromonas		140	7	4	1	1					4
genus	Aerosphaera			48
genus	Aerosticca Watanabe et al. 2020											3
genus	Aestuariibacter		2
genus	Aestuariicola	1
genus	Aestuariispira		492		2
genus	Afifella	1
genus	Afipia	4		1								3
genus	Agaribacter		287
genus	Agarilytica											1
genus	Agarivorans		21									1
genus	Agathobacter						1		1
genus	Agathobaculum		1079	1	8	28	4			10
genus	Aggregatibacter	380	208	172	2	3	2		1	6	5	1
genus	Aggregicoccus		1
genus	Agreia		2
genus	Agrilactobacillus		137							3
genus	Agrobacterium	60					1					4
genus	Agrococcus	25	2	3						1		1
genus	Agromyces	228	103				1			2	1	1
genus	Ahniella											1
genus	Ahrensia		1
genus	Akkermansia	1244	1054	811	36	28	16	15	18	10	4	4
genus	Albibacterium		1
genus	Albidovulum		1	1
genus	Albimonas		3
genus	Alcaligenes		13	2			1					3
genus	Alcanivorax	165	11				1					1
genus	Algibacter	1	3									1
genus	Algicola		44
genus	Algimonas		15							2
genus	Algiphilus		42
genus	Algivirga		1
genus	Algorimarina		1
genus	Algoriphagus		117				1					3
genus	Aliarcobacter	50	3	1							1	4
genus	Alicycliphilus	11	1						3			1
genus	Alicyclobacillus	2	137		3		3			4		3
genus	Aliicoccus		1
genus	Aliidiomarina		15
genus	Aliifodinibius		195
genus	Aliihoeflea		1
genus	Aliivibrio						1					1
genus	Alishewanella	240	53						2
genus	Alistipes		1124	733	33	32	14	16	11	10	7	4
genus	Alkalibacillus	94	5
genus	Alkalibacter		101				2			3
genus	Alkalibacterium	471	5		1		1				7
genus	Alkalibaculum		216				1			2
genus	Alkalicoccus		39
genus	Alkaliflexus		48							3
genus	Alkalihalobacillus	19	26	8			1					3
genus	Alkalilimnicola											1
genus	Alkalimarinus		16
genus	Alkaliphilus	1384	315		4		7			7	7	4
genus	Alkalispirillum			1
genus	Alkalispirochaeta		1
genus	Alkalitalea											1
genus	Alkanibacter		1
genus	Alkanindiges	1	3
genus	Allisonella		198	68	3	2
genus	Alloactinosynnema											4
genus	Allobacillus									2
genus	Allobaculum	108	172	8		2				2
genus	Allocatelliglobosispora		2
genus	Allochromatium	73										1
genus	Allofrancisella		6									1
genus	Allofustis		27	2			2
genus	Allohahella	158	80				2
genus	Alloiococcus	4	83	1
genus	Allokutzneria		1									1
genus	Alloprevotella	10	425	83	2		3			1	1
genus	Alloscardovia	82	170	19		2
genus	Allosphingosinicella		14
genus	Alsobacter		2
genus	Alteracholeplasma	24	42				1				1	1
genus	Altererythrobacter		18	2			1					4
genus	Alteribacillus		3
genus	Alteribacter		14
genus	Alterileibacterium				2					6
genus	Alterococcus		30							1
genus	Alteromonas		23				1					4
genus	Altibacter		1
genus	Alysiella		4
genus	Amaricoccus	48	3								2
genus	Amedibacillus	911	356			12	1	1		6	2
genus	Aminicella		640							1
genus	Aminiphilus	134	5								5
genus	Aminipila					1	1					4
genus	Aminivibrio		63
genus	Aminobacter	10	1									1
genus	Aminobacterium	52	16							4		1
genus	Aminomonas		52									4
genus	Ammonifex	487	7							1
genus	Ammoniphilus	53	33
genus	Amoebophilus	1255	3				1				5	1
genus	Amphibacillus		25									4
genus	Amphritea	37	3
genus	Amycolatopsis	16	4				1				1	4
genus	Amylibacter		3
genus	Amylolactobacillus									2
genus	Anabaena		2									3
genus	Anabaenopsis											1
genus	Anaerobacillus	320	1	20
genus	Anaerobacter			59
genus	Anaerobacterium		34	47	3		1			4
genus	Anaerobiospirillum	11	27			2
genus	Anaerobium		321		19		1			9
genus	Anaerobranca	1098	457				5			6	7
genus	Anaerobutyricum		1047	1	32	28	6	13		9		4
genus	Anaerocella		166
genus	Anaerococcus	637	626	373	5	1	1		5	9		4
genus	Anaerocolumna		924		8		4			5
genus	Anaerofilum	1393	585	249	8	5	2			12	7
genus	Anaerofustis	261	690	203		7	1			6
genus	Anaeroglobus		577	14						6
genus	Anaerolinea	103	70	4			1			2		1
genus	Anaeromassilibacillus				9	6	1	1
genus	Anaeromusa	138	20							2
genus	Anaeromyxobacter	1	618			1	1					1
genus	Anaerophaga		11							1
genus	Anaeroplasma	139	170	48	1					1	2
genus	Anaerorhabdus		24
genus	Anaerosacchariphilus		1		13
genus	Anaerosalibacter		231
genus	Anaerosinus		32	34						2
genus	Anaerosphaera		122							2
genus	Anaerospora	3	182
genus	Anaerosporobacter		621	550	5	1	1
genus	Anaerostipes	1239	1151	780	36	33	16	15	12	12	7	4
genus	Anaerotaenia				3		1
genus	Anaerotignum		1051		21	7	5	3		10		4
genus	Anaerotruncus	1364	939	730	29	20	10	1	7	11	7
genus	Anaerovibrio	1257	11	9		1	3			8	1
genus	Anaerovorax		49	276	13		1			3
genus	Anaplasma		8									1
genus	Ancylobacter	7
genus	Anderseniella		1									4
genus	Andreesenia		7
genus	Andreprevotia		1
genus	Aneurinibacillus	5	52				1					1
genus	Angelakisella				21	5
genus	Annandia											2
genus	Annwoodia		1
genus	Anoxybacillus	118	46	3			1		1	1	1	1
genus	Anoxybacter						1			1		4
genus	Anoxynatronum		703							3
genus	Anseongella						1
genus	Antarctobacter											1
genus	Apibacter						1					1
genus	Apilactobacillus		8									3
genus	Aquabacterium	7	56	5						1		1
genus	Aquamicrobium		12
genus	Aquaspirillum		34
genus	Aquibacter		7	1
genus	Aquicella		9
genus	Aquiflexum		11									1
genus	Aquihabitans		17
genus	Aquiluna		2
genus	Aquimarina	5	21				1					4
genus	Aquimonas	7	18
genus	Aquincola		9
genus	Aquipuribacter		5
genus	Aquirhabdus											1
genus	Aquisalibacillus		1
genus	Aquisalimonas		69
genus	Aquisphaera		2
genus	Aquitalea	15	2				1					4
genus	Arabia		1		1		1
genus	Arachidicoccus						1					3
genus	Arachnia	1		1		2	1
genus	Arcanobacterium	48	32	31	1		1				2
genus	Archaeoglobus		1
genus	Archangium		12									1
genus	Arcicella		98							2
genus	Arcobacter	76	20	1			1				1	4
genus	Arcobacter group	54	18	1			1				1	4
genus	Arcticibacterium											1
genus	Ardenticatena		18				2
genus	Arenibacter	4	1									3
genus	Arenimonas	5	35
genus	Arhodomonas		11
genus	Aridibacter		18
genus	Armatimonas		1
genus	Aromatoleum											1
genus	Arsenicicoccus											1
genus	Arsenophonus	28	31									1
genus	Arthrobacter	166	4	10	1		1			2	1	4
genus	Arthromitus						1					4
genus	Arthronema	8	1
genus	Arthrospira	17	4	1								1
genus	Asaccharobacter			11		1					7
genus	Asaccharospora			99			1
genus	Asaia		4									1
genus	Asinibacterium		10
genus	Aspergillus						1				1
genus	Asteroleplasma		295	73	1					3
genus	Asticcacaulis	531	57							1	1	1
genus	Atelocyanobacterium											1
genus	Atlantibacter											1
genus	Atopobacter		7
genus	Atopobium	494	388	98	3	3				4	3	1
genus	Atopococcus		15
genus	Atopomonas		6
genus	Atopostipes		73				2
genus	Aurantiacibacter		9									1
genus	Aurantimicrobium											1
genus	Aurantimonas	16
genus	Auraticoccus		3									3
genus	Aureibacter		5
genus	Aureicoccus		1
genus	Aureimonas		12									1
genus	Aureispira		1
genus	Aureitalea											3
genus	Auricoccus											1
genus	Auritidibacter											1
genus	Austwickia											1
genus	Avibacterium	158	72				2				4	1
genus	Azoarcus	82	4		1		1					1
genus	Azohydromonas	10	2
genus	Azomonas	4
genus	Azonexus		21							1
genus	Azorhizobium	6	2
genus	Azorhizophilus	2
genus	Azospira	10	4	9			1					1
genus	Azospirillum	271	343		2		1	3		7	2	4
genus	Azotobacter		4									1
genus	Babela											2
genus	Bacillus	7	6		1						1
genus	Bacillus	938	494	66	27	1	2		8	9	6	4
genus	Bacteria		1
genus	Bacterioplanes		1									1
genus	Bacteriovorax	8	38			1
genus	Bacteroides	1411	1154	784	35	33	21	17	18	12	7	4
genus	Baia		89
genus	Balneatrix		14
genus	Balneola	60	209
genus	Bariatricus					1				3
genus	Barnesiella		905	412	4	14	7	7	2	9		4
genus	Barrientosiimonas		28
genus	Bartonella	40	11				1					4
genus	Basfia		4				1					1
genus	Basilea		4									1
genus	Bdellovibrio	15	10				1			1	1	1
genus	Beduini				1		1
genus	Beggiatoa	3	1									1
genus	Beijerinckia	2										1
genus	Belliella		19									3
genus	Bellilinea	5	1
genus	Belnapia		4	1
genus	Bergeyella	22		5
genus	Bernardetia		86									1
genus	Berryella Wylensek et al. 2020					3	1					1
genus	Beutenbergia											1
genus	Bibersteinia	4					1					1
genus	Bifidobacterium	1397	1151	812	36	32	20	14	18	12	6	4
genus	Bigelowiella						2			2
genus	Bilophila	1276	4	605	32	19	12	12	14	12	7
genus	Biomaibacter											1
genus	Biostraticola		26
genus	Bisgaardia		76				1
genus	Bittarella				8	6	2
genus	Bizionia	2	2
genus	Blastocatella			1
genus	Blastochloris	5										1
genus	Blastococcus	3	1	1								1
genus	Blastocystis			2
genus	Blastomonas	8										1
genus	Blastopirellula		17
genus	Blattabacterium						1					4
genus	Blautia	1411	1154	789	36	32	20	17	18	12	7	4
genus	Blochmannia	357									6	4
genus	Bogoriella		11
genus	Bombilactobacillus		111
genus	Bombiscardovia		15					13
genus	Bordetella		47				1					4
genus	Borrelia	17	2									4
genus	Borreliella											4
genus	Bosea		7	1			1					4
genus	Bosea	4
genus	Boseongicola		2
genus	Boudabousia		18
genus	Bounagaea									1
genus	Bowdeniella		21
genus	Bowmanella		61
genus	Brachybacterium	218	20	5			1			1		1
genus	Brachymonas		3
genus	Brachyspira	23		13			1					4
genus	Brackiella		15
genus	Bradymonas											1
genus	Bradyrhizobium	35	2	10			1				1	4
genus	Brassicibacter		769		4		3			5
genus	Brenneria	52	404				1				3	1
genus	Breoghania											1
genus	Brevefilum											1
genus	Brevibacillus	133	79		1		1		1			4
genus	Brevibacterium	106	101	60			1		1		7	4
genus	Brevifollis		18
genus	Brevinema		5							1
genus	Brevirhabdus											1
genus	Brevundimonas	32	39	7			1		3	2		4
genus	Breznakia									3
genus	Breznakibacter		17							2
genus	Brochothrix	840	27				1			1	1	1
genus	Brockia		25
genus	Brucella	13	1	4						1		2
genus	Bryobacter		19
genus	Buchnera						1					4
genus	Bulleidia	269	59	2						2	5
genus	Burkholderia	401	33	1	11		1		1		5	4
genus	Buttiauxella		132									1
genus	Butyribacter					2		1	1
genus	Butyricicoccus		671	77	34	29	5	14	1	8
genus	Butyricimonas	1090	922	455	29	12	11	8	15	10	7	4
genus	Butyrivibrio	930	1124	416	28	27	10		3	9	7	4
genus	Bythopirellula		6
genus	Caballeronia		21									4
genus	Caedibacter		3
genus	Caenispirillum		25
genus	Caldalkalibacillus		137							2
genus	Caldanaerobacter	57	110	1						1		1
genus	Caldanaerobius		39							3
genus	Caldanaerovirga		5
genus	Caldibacillus	1								1		3
genus	Caldicellulosiruptor	1283	84		1		4			9	6	4
genus	Caldicoprobacter		36	119
genus	Caldilinea	465	9								7	3
genus	Caldimicrobium		2									1
genus	Caldimonas		24
genus	Caldinitratiruptor		277							7
genus	Caldisalinibacter		484							2
genus	Caldisericum		5									1
genus	Calditerricola		2
genus	Calditerrivibrio		3							1		1
genus	Caldithrix	270	10								7	1
genus	Calochaete		15
genus	Caloramator	1382	759	1	9	2	9			9	7
genus	Caloranaerobacter						2			7
genus	Caloribacterium		13
genus	Calothrix	570	100								6	4
genus	Camelimonas		3
genus	Caminibacter	1	3							2
genus	Caminicella	22	705							3
genus	Campylobacter	526	412	263	7	3	2		7	6	7	4
genus	Candidatus Azobacteroides	75										4
genus	Candidatus Desulforudis						1
genus	Candidatus Methanoregula Brauer et al. 2006		1
genus	Candidatus Nitrosoglobus											1
genus	Candidatus Tenderia Eddie et al. 2016						1
genus	Candidatus Velamenicoccus Kizina et al. 2022											1
genus	Candidatus Viadribacter Braun and Szewzyk 2016											4
genus	Candidatus Walczuchella											1
genus	Candidimonas		1
genus	Canicola		64
genus	Canis									2
genus	Capnocytophaga	15	12	2			1			1	1	4
genus	Caproiciproducens		1		29		1			9		4
genus	Carboxydocella	794	37				4			3	2	1
genus	Carboxydothermus		15									4
genus	Carboxylicivirga		267		1					1
genus	Cardinium											1
genus	Cardiobacterium	30	119	2			1
genus	Carnimonas		16
genus	Carnobacterium	55	5	8			1	1			2	4
genus	Carsonella											1
genus	Casaltella		715		3					6
genus	Castellaniella											1
genus	Catabacter		161	98		1		1		8	6
genus	Catellatispora	1
genus	Catellicoccus		1
genus	Catenibacterium	444	364	292		14	2		8	2	2
genus	Catenisphaera		83		1		2
genus	Catenovulum		1									1
genus	Catenulispora		3									4
genus	Catonella	929	1118	1	16	1	3			6	4
genus	Caulobacter	10	16	1			1					4
genus	Cecembia		16
genus	Cedecea		96				1
genus	Celeribacter											3
genus	Celerinatantimonas		6
genus	Cellulomonas	20	101			4	1					4
genus	Cellulophaga		4				2					4
genus	Cellulosibacter		129
genus	Cellulosilyticum		1059	15	2		1			10		4
genus	Cellulosimicrobium	2							1			1
genus	Cellvibrio	8	46				1					3
genus	Cenarchaeum DeLong and Preston 1996	1
genus	Centipeda			6
genus	Cerasicoccus	325	208				1			3	1
genus	Cereibacter	1	9				1					2
genus	Cesiribacter		35
genus	Cetobacterium	82	51	4		2					1
genus	Chamaesiphon		5									3
genus	Chania		12									3
genus	Chelativorans	2	9									1
genus	Chelatococcus	4										1
genus	Chelonobacter	39	2								1
genus	Chiayiivirga		1
genus	Chishuiella		5
genus	Chitinilyticum		3
genus	Chitinimonas		20							1
genus	Chitinispirillum		13							2
genus	Chitinivibrio		2
genus	Chitinivorax		11
genus	Chitinophaga	47	33			3	1					4
genus	Chlamydia	1	2				1					1
genus	Chloracidobacterium		15									3
genus	Chlorobaculum	1147	6				1			2	2	4
genus	Chlorobium		4				1					1
genus	Chloroflexus		2									1
genus	Chlorogloeopsis		10
genus	Chloroherpeton	6	21
genus	Chondrocystis											1
genus	Chondromyces	56	1							1
genus	Christensenella		257	179	16	26	3		2	10	7	4
genus	Chromatium	292	3
genus	Chromobacterium	137	10				1				1	4
genus	Chromohalobacter	1										1
genus	Chroococcidiopsis	1					1					1
genus	Chroococcus	571	2								2
genus	Chryseobacterium	108	41	2			1		1		6	4
genus	Chryseolinea		30									4
genus	Chryseomicrobium		21							2
genus	Chthoniobacter	23	12
genus	Chthonomonas	5	102									3
genus	Citreitalea		1
genus	Citricoccus	2	1
genus	Citrifermentans	1	8				2
genus	Citrobacter	267	16	55	17	7	3		4	10	3	4
genus	Citromicrobium											3
genus	Clavibacter			1								4
genus	Cloacibacillus	124	141	106		1	2		1	1		1
genus	Cloacibacterium		17	2			1		1			3
genus	Cloacimonas											1
genus	Clostridiisalibacter		7
genus	Clostridioides		87	488	3	31	7			5	6	4
genus	Clostridium	1410	1147	778	35	32	20	1	17	12	7	4
genus	Cnuella		3
genus	Cobetia		1									1
genus	Cocleimonas		2
genus	Coenonia		2
genus	Cognaticolwellia Liu et al. 2020											1
genus	Cohaesibacter		1									1
genus	Cohnella	444	55				3			3	7	4
genus	Coleofasciculus		1
genus	Colidextribacter		1		23					9
genus	Collimonas	7	32				1					4
genus	Collinsella	1144	989	770	32	21	6		14	8	7	4
genus	Colwellia	2	36				1					4
genus	Comamonas	132	37	22			1		8		1	3
genus	Commensalibacter		3
genus	Companilactobacillus	182	142	1	1		1					4
genus	Conchiformibius	4	1
genus	Conexibacter	6	8
genus	Confluentimicrobium											1
genus	Congregibacter		5
genus	Constrictibacter		2							1
genus	Contubernalis	202									5
genus	Coprobacillus	1378	564	154	5	25	5		3	3	7
genus	Coprobacter		679	337	9	9	2		1	5
genus	Coprococcus	1407	1153	2	31	32	20	2	17	12	7
genus	Coprothermobacter	13	53	7
genus	Coraliomargarita	397	75									1
genus	Corallibacter		1
genus	Corallococcus											4
genus	Coriobacterium	108	33		2		1					3
genus	Corticibacter		4
genus	Corynebacterium	701	640	445	8	13	2		7	10	1	4
genus	Couchioplanes	1	13
genus	Coxiella		24									1
genus	Crassaminicella						1
genus	Craurococcus			2
genus	Crenothrix	3
genus	Criblamydia		43
genus	Crinalium		1									1
genus	Croceibacter		7									1
genus	Croceibacterium											1
genus	Croceicoccus											1
genus	Cronobacter		87	83			2			1		4
genus	Cruoricaptor		54	1
genus	Cryobacterium		2	11								1
genus	Cryomorpha		88
genus	Cryptanaerobacter		1
genus	Cryptobacterium		373	1			1			3		1
genus	Cryptococcus								13
genus	Cryptosporangium	1
genus	Cryptosporidium						1
genus	Cucumibacter		2
genus	Culturomica									8
genus	Cuneatibacter									10
genus	Cupidesulfovibrio	2	13
genus	Cupriavidus	11	59	1			1			1		4
genus	Curtobacterium	12		1			1					1
genus	Curvibacter	36	7	6			1				2
genus	Cutibacterium	7	12	29			1				1	1
genus	Cyanobacterium	226	33								1
genus	Cyanobium		4	1			1					1
genus	Cyanothece											1
genus	Cyclobacterium		66									4
genus	Cycloclasticus	14	22				1					1
genus	Cyclonatronum											3
genus	Cylindrospermum		1
genus	Cystobacter	52	41									1
genus	Cytobacillus	106				1	1					4
genus	Cytophaga		57							2		1
genus	Dactylococcopsis											3
genus	Dactylosporangium	23	5
genus	Dasania		24
genus	Dechloromonas	127	9				1
genus	Deefgea	1	6
genus	Deferribacter	169	37								4	4
genus	Deferrisoma		24							1
genus	Defluviicoccus		9							1
genus	Defluviimonas		3	1
genus	Defluviitalea		233	2			3			3
genus	Defluviitoga		14									1
genus	Dehalobacter	2	216		3		1					4
genus	Dehalobacterium	588	2	9			2		7	1	3	1
genus	Dehalococcoides	3	60			1	1			1		1
genus	Dehalogenimonas	91	163							1		4
genus	Deinococcus	665	158	6	1		1			2	4	4
genus	Delftia	21	7	64								3
genus	Dellaglioa		100	11
genus	Demequina	9	66							1
genus	Dendrosporobacter		54
genus	Denitratisoma	164	11	1
genus	Denitrobacter	4
genus	Denitrobacterium			1	6		1					1
genus	Denitrovibrio											3
genus	Dependoparvovirus									2
genus	Dermabacter	46	62	52				1				1
genus	Dermacoccus	10	1			1			1			1
genus	Dermatophylus	1
genus	Derxia		47
genus	Desemzia	2	254
genus	Desertibacter		5
genus	Deserticella		7
genus	Desmospora		6
genus	Desulfacinum	65	2
genus	Desulfallas		37				3					1
genus	Desulfarculus		136									1
genus	Desulfatibacillum		5				1					1
genus	Desulfatiferula		19
genus	Desulfatiglans		11
genus	Desulfatirhabdium		1
genus	Desulfatitalea		8
genus	Desulfitibacter	3	101	1			2			1
genus	Desulfitispora		42							2
genus	Desulfitobacterium	248	109	1			1				3	4
genus	Desulfobacca	1	23							1		1
genus	Desulfobacter	90	14				4				2	3
genus	Desulfobacterium	1	317				1			1		1
genus	Desulfobacula		1									3
genus	Desulfobaculum		14
genus	Desulfobotulus		6
genus	Desulfobulbus	8	95				1					1
genus	Desulfocapsa	7	2									1
genus	Desulfocarbo		138
genus	Desulfocella		313	1			2			6
genus	Desulfococcus	7	3				1					4
genus	Desulfoconvexum		1
genus	Desulfocurvibacter		1				1
genus	Desulfocurvus		3
genus	Desulfofaba	9	40
genus	Desulfofarcimen	42	251				1					4
genus	Desulfofrigus	145	49
genus	Desulfofundulus	231	99				1
genus	Desulfofustis		11
genus	Desulfoglaeba		263
genus	Desulfohalobium		3									3
genus	Desulfohalophilus		1
genus	Desulfohalotomaculum	143	782				1			1
genus	Desulfohalovibrio	3	82
genus	Desulfomicrobium	87	259				1			7		4
genus	Desulfomonile	203	15								1	1
genus	Desulfonatronobacter		5
genus	Desulfonatronovibrio	196	8								2
genus	Desulfonatronum	278	43								2
genus	Desulfonauticus	78	38								7
genus	Desulfonema		27							2
genus	Desulfonispora		99
genus	Desulfopila		2				1
genus	Desulfoplanes		29
genus	Desulforegula		80				2
genus	Desulforhabdus		1
genus	Desulforhopalus	3
genus	Desulfosalsimonas		2
genus	Desulfosarcina	95	22				1
genus	Desulfoscipio Watanabe et al. 2020		8				1					1
genus	Desulfosoma		140				2
genus	Desulfosporosinus	627	228	1	1		1			5	7	4
genus	Desulfotalea	5	1
genus	Desulfothermus		14
genus	Desulfotignum	2
genus	Desulfotomaculum	759	922	2	9	4	2			9	7	4
genus	Desulfovibrio	1174	998	382	20	7	11	6	10	11	7	4
genus	Desulfovirga		29
genus	Desulfurella	5	6									1
genus	Desulfuribacillus		7				1
genus	Desulfurispira		3
genus	Desulfurispirillum	244	1				1					1
genus	Desulfurispora	754	620				2			2	2
genus	Desulfurivibrio		2									1
genus	Desulfurobacterium		6									1
genus	Desulfurococcus	1
genus	Desulfuromonas	67	57				2					1
genus	Desulfuromusa	663	4				1			1	5
genus	Dethiobacter	47	8	1			2			3	1
genus	Dethiosulfatibacter		334							2
genus	Dethiosulfovibrio	773	105				1			3	6
genus	Devosia	447	63						1	1		4
genus	Devriesea											1
genus	Dialister	931	1011	475	10	11	10	4	14	9	5	4
genus	Diaphorobacter	7	5				1			1
genus	Dichelobacter	1										1
genus	Dichotomicrobium		11
genus	Dickeya	24	46		1		1					4
genus	Dictyoglomus		78			2						1
genus	Dielma		624	308	9	15	1			7
genus	Dientamoeba			1
genus	Dietzia	79	146	1								1
genus	Dinoroseobacter											1
genus	Diplorickettsia		13
genus	Dispar									2
genus	Dissulfuribacter		10
genus	Dokdonella	548	45							1	1	1
genus	Dokdonia		23									4
genus	Dolichospermum	933	2							1	7	1
genus	Dolosicoccus		7							1
genus	Dolosigranulum		219							1
genus	Dongia		182							3
genus	Dorea	1396	1139	779	35	33	21	14	18	11	7
genus	Draconibacterium		31									1
genus	Drancourtella					3		2		10
genus	Duganella		3							1
genus	Duncaniella						1					4
genus	Duodenibacillus				7			1		2
genus	Dyadobacter	377	69				1				4	4
genus	Dyella	1	8							1		1
genus	Dysgonomonas	1141	735	10	4		7		2	7	7
genus	Dysosmobacter					9	1
genus	Echinicola		52				1					4
genus	Ectobacillus		26							2
genus	Ectothiorhodosinus		4
genus	Ectothiorhodospira	234	43									1
genus	Edaphobacter	161									1
genus	Edwardsiella	76	30				1
genus	Edwardsiella	36										1
genus	Effusibacillus		207							5
genus	Eggerthella	1050	952	575	24	32	8	7	8	10	6	4
genus	Eggerthia		417	1						1
genus	Egibacter											1
genus	Egicoccus											1
genus	Ehrlichia	359	9				1			1	2	1
genus	Eikenella	10	6	5			1				2	1
genus	Eionea		1
genus	Eisenbergiella		873	518	24	3	5	7		10	6
genus	Eisenibacter		141
genus	Ekhidna		1
genus	Elioraea		3
genus	Elizabethkingia	4	21				1					4
genus	Elstera		3
genus	Elusimicrobium	7	62	7						1		1
genus	Emcibacter		152
genus	Emergencia					2		1		10
genus	Empedobacter		8									1
genus	Emticicia	982	154		2		1			2	5
genus	Endobacter		1
genus	Endobugula	89
genus	Endolissoclinum											1
genus	Endomicrobium											1
genus	Endozoicomonas		5									1
genus	Enhydrobacter	32
genus	Enorma		119	68	3	2	1			1
genus	Ensifer		3				1					1
genus	Enterobacter	612	61	208	9	6	5	1	15	6	7	4
genus	Enterocloster		1022	2	33	29	5	5		10		4
genus	Enterococcus	1138	215	138	27	27	6	5	9	6	4	4
genus	Enterorhabdus		366	263	7	12		7		1
genus	Enteroscipio					2
genus	Enterovibrio											1
genus	Entomomonas											1
genus	Entomoplasma	8	22							2		4
genus	Epibacterium											1
genus	Epilithonimonas	6	3									1
genus	Epulopiscium			59	3				1
genus	Ercella		289
genus	Ereboglobus											3
genus	Eremococcus		29	21						1
genus	Eremococcus		1	11
genus	Erwinia	347	185	1	1		2		11	1	2	4
genus	Erysipelatoclostridium		1147	756	35	29	6	11		10	7	4
genus	Erysipelothrix	1178	702		3		9			5	7	3
genus	Erythrobacter	96	15				1		1			1
genus	Erythromicrobium	11
genus	Escherichia	1150	64	1	11	24	7	8	1	2	6	4
genus	Ethanoligenens	682	921				4			11		4
genus	Eubacterium	1337	1154	151	36	33	12	14	13	11	7	4
genus	Eudoraea		52
genus	Euryhalocaulis		8
genus	Euzebya	793	49				1			1		1
genus	Euzebyella											1
genus	Evansella											1
genus	Evtepia					10	3
genus	Exiguobacterium	22	36				1				3	4
genus	Exophiala						1
genus	Extensimonas		1
genus	Extibacter									7
genus	Ezakiella		296				3			3		1
genus	Fabibacter		6
genus	Facklamia	136	864	50			2		1	7
genus	Faecalibacterium	1411	1153	772	35	33	18	4	18	2	7	4
genus	Faecalibaculum						1					1
genus	Faecalicatena		687		21		2
genus	Faecalicoccus		684		3	1	3			5
genus	Faecalimonas					2
genus	Faecalitalea	143	136		18	18	5					4
genus	Falcatimonas		1		14		1
genus	Falsiporphyromonas		275				2
genus	Falsirhodobacter		1
genus	Fangia		12
genus	Fannyhessea		169	2
genus	Fastidiosipila		98	74	1		1					3
genus	Fenollaria		565		4	2				6
genus	Fermentimonas						1					4
genus	Ferrimicrobium	14	2								1
genus	Ferrimonas	12	40									1
genus	Ferrithrix		187
genus	Ferrovibrio		2
genus	Ferrovum		2
genus	Ferruginibacter		59
genus	Fervidicella		8							1
genus	Fervidobacterium	15									1	4
genus	Fibrella						1					3
genus	Fibrobacter	112	239	85			2					1
genus	Fictibacillus		36				1					4
genus	Filifactor	414	372		18		1			1		3
genus	Filimonas											4
genus	Filomicrobium		2
genus	Fimbriimonas	2	27									1
genus	Finegoldia	715	806	443	5	3	2		4	9	1	3
genus	Fischerella											1
genus	Flagellimonas		1									1
genus	Flammeovirga	316	29				1			1		4
genus	Flaviaesturariibacter		1
genus	Flavicella		4
genus	Flaviflexus		21				1					3
genus	Flavihumibacter		3
genus	Flavilitoribacter		7
genus	Flavisolibacter	30	1	1			1			1		4
genus	Flavitalea		9
genus	Flavivirga											1
genus	Flavobacterium	60	41	394			5				7	4
genus	Flavonifractor		1121	768	31	32	10	1		10	7	4
genus	Flectobacillus		83
genus	Flexibacter		8	1	2
genus	Flexispira Bryner 1987	3
genus	Flexistipes		63									1
genus	Flexithrix		11
genus	Flintibacter				25	1	2			9
genus	Fluoribacter											1
genus	Fluviicola		17		3		1					1
genus	Fluviimonas		443							1
genus	Fluviispira											3
genus	Fodinibius		5				2
genus	Fodinicurvata		438		1					8
genus	Fontibacillus		2
genus	Fontibacter		32
genus	Fonticella		136	2
genus	Formosa	2										4
genus	Fournierella		1		16	4	1
genus	Francisella	62	60	2			2				1	4
genus	Franconibacter		11
genus	Frankia	2					1					4
genus	Frateuria		3									1
genus	Frederiksenia		3				1
genus	Fretibacter		14
genus	Fretibacterium		7	98			1
genus	Friedmanniella	25	28								1	1
genus	Frigoribacterium	1
genus	Frischella		2				1					3
genus	Frisingicoccus									8
genus	Frondihabitans											1
genus	Fructilactobacillus	63	83	1			1					1
genus	Fructobacillus	66	33
genus	Fuchsiella		12							1
genus	Fucophilus		2
genus	Fulvibacter		1
genus	Fulvimarina		1
genus	Fulvitalea		62
genus	Fulvivirga	7	89
genus	Furfurilactobacillus	578	34				1				1
genus	Fuscovulum Suresh et al. 2019									1		3
genus	Fusibacter	86	217				3			6	6
genus	Fusicatenibacter		1126	760	17		4	13	1
genus	Fusobacterium	622	533	121	5	4	1	1	2	4	6	4
genus	Gabonia Mourembou et al. 2015							1
genus	Gabonibacter				10		1			2
genus	Gaetbulibacter			1
genus	Gaiella		41				2
genus	Galenea		41				2
genus	Gallaecimonas		4
genus	Gallibacterium	24	69	1			1				1	1
genus	Gallicola		69	70					1
genus	Gallionella	173	23						2			1
genus	Garciella		13				2
genus	Gardnerella	77	157	40	1	1				2		1
genus	Garicola		2
genus	Garritya		2
genus	Gelria		2	211			2
genus	Gemella	1286	634	153	3	16	5			7	6	4
genus	Geminicoccus		69							2
genus	Geminisphaera		10
genus	Geminocystis											1
genus	Gemmata	9	12	1								1
genus	Gemmatimonas	8	21									1
genus	Gemmatirosa		8									1
genus	Gemmiger		1040		16	10	7			9
genus	Gemmobacter		2							1		4
genus	Geoalkalibacter		11									1
genus	Geobacillus	455	60	7	11		1		1	2	3	1
genus	Geobacter	87	50				5				1	4
genus	Geodermatophilus	5	8							1		2
genus	Geofilum		119
genus	Geomicrobium		21
genus	Geopsychrobacter		6
genus	Georgenia	11	34
genus	Georhizobium											1
genus	Geosporobacter						2					4
genus	Geothermobacter		2
genus	Geothermomicrobium									2
genus	Geothrix	654	447				2			3
genus	Geotoga		1
genus	Geovibrio	14	1									3
genus	Gibbsiella											4
genus	Giesbergeria	12	1
genus	Gilliamella											1
genus	Gillisia	865	28								1	1
genus	Gilvimarinus		1
genus	Gimesia		2
genus	Glaciecola	195	64									3
genus	Glaciimonas		2
genus	Glaesserella		4				1					1
genus	Gleimia	45	39	1
genus	Globicatella		19	2						1
genus	Gloeobacter		9				1			1		1
genus	Gloeothece		1
genus	Gloeotrichia	3
genus	Glomeribacter	586	2								3
genus	Gluconacetobacter	7	7									1
genus	Gluconobacter	108	3				1					1
genus	Glutamicibacter	116	59								1
genus	Glycocaulis		1									1
genus	Glycomyces	65	23								1
genus	Gorbachella		1		1		1
genus	Gordonia	55	81	1			1					4
genus	Gordonibacter		659	457	24	23	2	3		7		1
genus	Gottschalkia		156				4			3		4
genus	Gracilibacillus		159							1
genus	Gracilibacter		487	3	2		3			6
genus	Gracilimonas		306				2			3
genus	Gramella	56	2				1				6	4
genus	Granulibacter											4
genus	Granulicatella	661	153	320		13	2		3	5	5
genus	Granulicella	93	17				1
genus	Granulosicoccus		77									1
genus	Gryllotalpicola		8									1
genus	Gudongella						1					1
genus	Guggenheimella		405				2			6
genus	Guizotia									2
genus	Gulbenkiania		5
genus	Gullanella											2
genus	Gulosibacter	59	6	29						1
genus	Guyparkeria	10	1
genus	Gynuella		39									1
genus	Haematobacter											3
genus	Haematospirillum											2
genus	Haemophilus	1063	866	528	21	17	5	6	17	5	6	4
genus	Hafnia			14	2		4					1
genus	Hahella	160	197							1		3
genus	Halanaerobacter	10	4								4
genus	Halanaerobaculum		6
genus	Halanaerobium	290	11				1			2	2	4
genus	Halarcobacter		9				1					2
genus	Halarsenatibacter		73
genus	Haliangium	118	24									3
genus	Haliea		7
genus	Halioglobus		1									1
genus	Haliscomenobacter	1	77									3
genus	Halobacillus		28				1					4
genus	Halobacteriovorax	7	34				1					4
genus	Halobacteroides		8									1
genus	Halobaculum	2
genus	Halocella		9				1					4
genus	Halochromatium	78	194				2
genus	Halodesulfovibrio		5
genus	Haloechinothrix		3
genus	Haloferax	1
genus	Haloferula		35				2
genus	Haloglycomyces		1
genus	Halolactibacillus		10
genus	Halomicroarcula		1
genus	Halomicronema		1									3
genus	Halomonas	147	440		1	1	3			1	3	4
genus	Halonatronum		5
genus	Haloplasma		34	1						2
genus	Halopolyspora		146				2
genus	Halopseudomonas		8
genus	Halorhodospira	32	93							1	2	1
genus	Halospina		8
genus	Halospirulina		1
genus	Halotalea											1
genus	Halothermothrix		159				2			5		1
genus	Halothiobacillus	17	48				2
genus	Haploplasma	61	25				1			2	2	3
genus	Harryflintia					4	1
genus	Hartmannibacter											1
genus	Hathewaya	1384	600				4			3	7
genus	Hazenella		18
genus	Helcococcus	92	173	19
genus	Helicobacter	396	33	3			1			1	1	4
genus	Heliimonas		8
genus	Heliobacterium	1	13				1	3		3		1
genus	Heliomicrobium		1				1					1
genus	Heliomonas				1		1
genus	Heliophilum		11							2
genus	Heliorestis	507	10							4	5
genus	Heliothrix		1
genus	Hellea		9
genus	Henriciella		443							4
genus	Hepatoplasma											1
genus	Hephaestia		2
genus	Herbaspirillum	540	59	250	13		2			3	3	4
genus	Herbinix		387		6		2			6		4
genus	Herminiimonas	46	183							2		4
genus	Herpetosiphon	1	5
genus	Hespellia		1114	499	15		1			10
genus	Heyndrickxia	1	2
genus	Hippea		4									1
genus	Hirschia		1
genus	Histophilus		19				1					1
genus	Hoeflea											1
genus	Holdemanella	725	624		2	17	2			5	6
genus	Holdemania	1195	969	565	23	26	5		9	12	7
genus	Holophaga		10							2
genus	Holospora					1
genus	Holzapfelia		58
genus	Homo						1
genus	Hoppeia		1
genus	Howardella		813	123	2		2			2
genus	Hoyosella		35
genus	Hugenholtzia		35				2
genus	Humibacter		19
genus	Hungateiclostridium	590	561	2	4		1			7	6	4
genus	Hungatella		1089		32	31	5	7		10	7
genus	Hwangdonia		12
genus	Hydrocarboniphaga	1004	2							1
genus	Hydrocoleum	15	1
genus	Hydrogenibacillus		87		4		2			4
genus	Hydrogenispora		523
genus	Hydrogenoanaerobacterium		920	224			2
genus	Hydrogenobacter		4							1		3
genus	Hydrogenobaculum	8	1				2			4		1
genus	Hydrogenophaga	41	12	1			1			1		1
genus	Hydrogenophilus	621	214	3			1			1
genus	Hydrogenothermus		21
genus	Hydrogenovibrio	29	21									1
genus	Hydrotalea		18
genus	Hylemonella	1
genus	Hymenobacter	839	44	1			1			1		4
genus	Hyphomicrobium	153	18				1				4	4
genus	Hyphomonas	70	11								3	2
genus	Iamia		5
genus	Ianmoorea											3
genus	Ichthyobacterium											1
genus	Ideonella		2
genus	Idiomarina	53	11				1					1
genus	Ignatzschineria	1	6
genus	Ignavibacterium	37	45									1
genus	Ignavigranum		92	2
genus	Ihubacter				28					9
genus	Ileibacterium				3
genus	Ilumatobacter		97
genus	Ilyobacter											4
genus	Immundisolibacter											3
genus	Imperialibacter		16
genus	Imtechella		1			1
genus	Indibacter		23
genus	Indioceanicola											3
genus	Inquilinus	6	14
genus	Insolitispirillum	818	224							7
genus	Intestinibacillus				8					8
genus	Intestinibacter		921	770	19	22	3			9
genus	Intestinibaculum Kim et al. 2019						1					4
genus	Intestinimonas		1094	721	34	28	6	1		10		4
genus	Intrasporangium		2
genus	Iodobacter		7									3
genus	Ishikawaella											1
genus	Isochromatium		6
genus	Izimaplasma											1
genus	Jahnia Reichenbach 2005		1
genus	Janibacter	2										1
genus	Jannaschia	4	1									1
genus	Janthinobacterium	43	6								3	4
genus	Jatrophihabitans		6									1
genus	Jeotgalibaca						1					3
genus	Jeotgalibacillus		7				1			1
genus	Jeotgalicoccus	15	80	1								1
genus	Jiangella	17	2								1	4
genus	Jinshanibacter											3
genus	Johnsonella	1357	785	10		12	1			2	7
genus	Jonesia	27	111
genus	Jonquetella		115	10								1
genus	Kaistella		1									3
genus	Kaistia	10	36							1
genus	Kallipyga		67		1					1
genus	Kallotenue		16
genus	Kandleria		168				2
genus	Kangiella		36									1
genus	Kastovskya		2
genus	Keratinibaculum		10
genus	Ketobacter											1
genus	Ketogulonicigenium		3									1
genus	Kiloniella		51		3					2
genus	Kineococcus	4	8									1
genus	Kineosporia	7	1
genus	Kinetoplastibacterium											4
genus	Kingella	10	4	2								1
genus	Kistimonas		1
genus	Kitasatospora	37	9				1				5	4
genus	Klebsiella	434	77	144	7	13	1	13	12	11	5	4
genus	Kluyvera		15	537	4		1				7
genus	Knoellia	1
genus	Kocuria	44	29	6		1	1		1			4
genus	Kofleria		2
genus	Komagataeibacter		42				1					3
genus	Kordia		1									1
genus	Kordiimonas		2
genus	Koribacter	4										1
genus	Kosakonia	44	277				4					3
genus	Kosmotoga	11	12									1
genus	Kozakia		1									3
genus	Kribbella	71	317								5
genus	Kroppenstedtia		3				1			2
genus	Ktedonobacter		1
genus	Kurthia						1					3
genus	Kushneria	321	3								2	1
genus	Kutzneria											1
genus	Kyrpidia		125									1
genus	Kytococcus	1		2								1
genus	Labilibacter		4
genus	Labilibaculum						1					4
genus	Labilithrix		36
genus	Labrenzia						1					1
genus	Labrys	5									6
genus	Laceyella	31	5									1
genus	Lachnoanaerobaculum		1123	12		5	2			7		4
genus	Lachnobacterium	1291	796	12	28	1	6		8	10	4
genus	Lachnoclostridium		1151	2	36	31	7	13		10	3	4
genus	Lachnospira	1411	1146	713	35	33	15	11	18	12	7	4
genus	Lachnotalea				3	6
genus	Lacibacter		2	3
genus	Lacibacterium		132
genus	Lacihabitans		7
genus	Lacimicrobium											1
genus	Lacinutrix		1									4
genus	Lacrimispora		375	1	32	17	2	1		2		4
genus	Lacticaseibacillus	298	65	141	3	9	2	4		1	3	4
genus	Lactiplantibacillus	183	12	65		11	1	4		1	4	2
genus	Lactivibrio		2
genus	Lactobacillus	1309	1152	813	36	29	12	12	18	12	7	4
genus	Lactococcus	957	722	260	9	10	6	1	7	9	3	4
genus	Lactonifactor		757	477	27	1	4			10	7
genus	Lactovum		267
genus	Lacunisphaera											3
genus	Lagierella				1
genus	Lamprocystis		2
genus	Lancefieldella	88	93	4		2	1			2	1	1
genus	Lapidilactobacillus		4
genus	Laribacter		3									3
genus	Larkinella		1
genus	Larsenimonas		1
genus	Lascolabacillus									1
genus	Latilactobacillus		10	33		4	1			1		3
genus	Lautropia	92	47	8							1	1
genus	Lawsonella				1
genus	Lawsonia	6	615				1			1		3
genus	Lawsonibacter					9	1
genus	Leadbetterella		15									3
genus	Lebetimonas		24
genus	Leclercia						1					1
genus	Legionella	919	68	1			1			5	3	4
genus	Leifsonia		1	1			1					1
genus	Leisingera											1
genus	Lelliottia	451	2					1			2	4
genus	Leminorella		4									1
genus	Lentibacillus	222	58									1
genus	Lentilactobacillus	77	3	14		2	1				1	2
genus	Lentisphaera		4
genus	Lentzea	2	1									1
genus	Leptofauchea								10
genus	Leptolinea		100							2
genus	Leptolyngbya	315	1	1			1				2	4
genus	Leptonema		20							2
genus	Leptospira	376	30				2					4
genus	Leptospirillum		17									1
genus	Leptothrix	204	7						2		1
genus	Leptotrichia	63	64	29			2					4
genus	Leucobacter	20	42				1					1
genus	Leuconostoc	643	795	78	3	7	2		2	11	6	4
genus	Leucothrix	14	5								1
genus	Levilactobacillus	83	44	5		1	1				1
genus	Levilinea		1
genus	Levyella		403			2
genus	Lewinella	66	8
genus	Libanicoccus											1
genus	Liberibacter	68	2		6						7	1
genus	Lichenihabitans											1
genus	Ligilactobacillus	184	158	65		7	1			2	1	4
genus	Limibacillus		21
genus	Limibacter		1
genus	Limimaricola		2
genus	Limimonas		5
genus	Limisphaera		21				2
genus	Limnobacter	1019	31	1			1		2		1
genus	Limnobaculum											1
genus	Limnochorda		1									1
genus	Limnohabitans	17	3						2
genus	Limnoraphis		3
genus	Limnospira	2
genus	Limosa									1
genus	Limosilactobacillus	215	316	75	2	6	2	2		1	1	4
genus	Liquorilactobacillus		172				1
genus	Lishizhenia		2
genus	Listeria	323	244	1		1	1		4	2		4
genus	Litoribacillus		65
genus	Litoribacter		26
genus	Litoribrevibacter		11
genus	Litoricola	87	38								3
genus	Litorilinea		10				2			2
genus	Litorilituus		86							1		4
genus	Loigolactobacillus		11				1			1
genus	Loktanella	2	7
genus	Longibaculum					4	1			3
genus	Longicatena					2				4
genus	Longilinea	7	3
genus	Longimonas		57
genus	Lonsdalea	8
genus	Luminiphilus		51
genus	Lunatimonas		2
genus	Luteibacter	799	42								3	1
genus	Luteibaculum		1
genus	Luteimonas	22	19						1			1
genus	Luteipulveratus											1
genus	Luteitalea											1
genus	Luteivirga		5
genus	Luteococcus	11									1
genus	Luteolibacter	603	41				2
genus	Lutibacter		39									4
genus	Lutibacterium	7
genus	Lutibaculum		1
genus	Lutispora		305		1		3			5
genus	Lysinibacillus	189	17	5			1		5	2	1	4
genus	Lysinimonas											1
genus	Lysobacter	272	67	1			1		2	3		4
genus	Macellibacteroides									4
genus	Macrococcus	542	9				2			2	3	3
genus	Mageeibacillus						1			6		1
genus	Magnetococcus		18				1					1
genus	Magnetospira		22									1
genus	Magnetospirillum	10	16				1					1
genus	Magnetovibrio		3							1
genus	Mahella		34				1
genus	Mailhella