Bacteria reported by various 16s providers

Typical cost is $60-$160 depending on providers and specials. Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

Bacteria Reported on not 16s Tests

Rank Bacteria Thryve
964 Samples
BiomeSight
946 Samples
uBiome
813 Samples
SequentiaBiotech
36 Samples
CosmosId
34 Samples
custom
18 Samples
AmericanGut
18 Samples
Microba
15 Samples
BiomeSightRdp
10 Samples
Medivere
7 Samples
es-xenogene
4 Samples
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
1
Canidae 1
Escherichia virus phiX174 1
Euaesthetinae 1
Evacanthinae 1
Guizotia 1
mitosporic Phaeosphaeriaceae 1
Scolopacidae 1
Trapezitinae 1
Unknown 115117 1
Unknown 1247519 1
Unknown 28906 1
Unknown 302788 4
Unknown 34985 4
Unknown 34988 4
Unknown 36851 9
Unknown 469594 11
Unknown 469608 1
Unknown 755821 1
biotype Haemophilus influenzae aegyptius 1
biotype Mycobacterium tuberculosis variant caprae 1
biotype Mycobacterium tuberculosis variant pinnipedii 101
clade 1
clade 50 kb inversion clade 11 271 2 3 1
clade Amniota 1
clade ant endosymbionts 250 6 4
clade ant, tsetse, mealybug, aphid, etc. endosymbionts 258 1 6 4
clade aphid secondary symbionts 15 1
clade asterids 18
clade Bacteria candidate phyla 199 6 1 3
clade Bacteroidetes/Chlorobi group 953 945 790 36 33 17 18 14 10 7 4
clade Bilateria 7 167 11 1 5 1 1 4
clade Boreoeutheria 1
clade Caldiserica/Cryosericota group 5 1 1
clade Candidatus Baumannia 1
clade Candidatus Dependentiae 3
clade Candidatus Uzinura 1
clade core chlorophytes 1
clade core genistoids 11 272 2 3 1
clade Cyanobacteria/Melainabacteria group 673 884 31 18 5 7 4 7 4
clade Deuterostomia 5 1 1
clade Dicondylia 7 106 11 1 4 1 1 4
clade Dipnotetrapodomorpha 5 1 1
clade dothideomyceta 1
clade Ecdysozoa 7 106 11 1 4 1 1 4
clade Embryophyta 11 273 18 2 3 1
clade eudicotyledons 11 273 18 2 3 1
clade Eumetazoa 7 193 11 1 5 1 1 4
clade Euphyllophyta 11 273 18 2 3 1
clade Euteleostomi 5 1 1
clade Eutheria 1
clade fabids 11 271 2 3 1
clade FCB group 953 945 790 36 33 17 18 15 10 7 4
clade genistoids sensu lato 11 271 2 3 1
clade Gnathostomata 5 1 1
clade Gunneridae 11 273 18 2 3 1
clade lamiids 18
clade leotiomyceta 1 1
clade lice endosymbionts 1
clade Lophotrochozoa 179 1
clade Luna-1 subcluster 2 1 3
clade Mandibulata 7 106 11 1 4 1 1 4
clade mealybug secondary endosymbionts 1
clade Mesangiospermae 11 273 18 2 3 1
clade Metamonada 1
clade Methanomada group 213 275 220 16 3 4 11 6 7
clade Nitrospinae/Tectomicrobia group 5 3
clade OM182 clade 1
clade OMG group 1
clade Opisthokonta 7 193 11 1 5 13 1 6 4
clade Panarthropoda 7 106 11 1 4 1 1 4
clade Pancrustacea 7 106 11 1 4 1 1 4
clade Patescibacteria group 1
clade Pentapetalae 11 273 18 2 3 1
clade Protostomia 7 162 11 1 4 1 1 4
clade PVC group 888 882 567 29 17 17 14 7 10 5 4
clade Rhizaria 2 2
clade rosids 11 271 2 3 1
clade saccharomyceta 1 6
clade Sar 2 2 2
clade SAR116 cluster 1
clade sordariomyceta 1
clade Spermatophyta 11 273 18 2 3 1
clade Spiralia 179 1
clade Stenosarchaea group 8 8 10 1
clade Stramenopiles 2
clade sulfur-oxidizing symbionts 1 1
clade TACK group 3 7 1
clade Teleostomi 5 1 1
clade Terrabacteria group 953 945 792 36 33 17 18 15 10 7 4
clade Tetrapoda 5 1 1
clade Theria 1
clade Tracheophyta 11 273 18 2 3 1
clade Vertebrata 5 1 1
class 1
class 1
class Acidimicrobiia 304 119 2 3 3 1
class Acidithiobacillia 34 1 1
class Acidobacteriia 570 156 111 2 2 2 4
class Actinomycetia 955 938 785 35 33 14 17 12 10 7 4
class Agaricomycetes 1
class algae 2 2
class Alphaproteobacteria 931 917 438 32 4 4 7 8 10 7 4
class Amphibia 5 1
class Anaerolineae 200 382 9 1 5 7 4
class Anthozoa 36 1
class Aquificae 46 7 3 3 4
class Archaeoglobi 1
class Ardenticatenia 11 3 1
class Armatimonadia 1
class Bacilli 984 944 786 36 32 14 18 13 10 7 4
class Bacteroidia 984 944 790 36 33 17 18 14 10 7 4
class Balneolia 498 49 7 2 3
class Betaproteobacteria 981 942 747 36 31 12 18 12 10 7 4
class Bivalvia 123
class Blastocatellia 119 1 1 3
class Caldilineae 246 296 2 5 7 3
class Caldisericia 5 1 1
class Calditrichia 5 188 7 1
class Candidatus Babeliae 3
class Candidatus Brocadiia 10 1
class Chitinispirillia 13 2
class Chitinivibrionia 2
class Chitinophagia 767 457 5 5 1 1 7 6 4
class Chlamydiia 114 77 1 1 1
class Chlorobia 71 758 1 1 1 2 4
class Chloroflexia 51 2 2 14 1 1
class Chlorophyceae 1
class Chrysiogenetes 15 169 1 1
class Chthonomonadetes 96 5 3
class Clostridia 984 944 792 36 33 17 18 14 10 7 4
class Conoidasida 1
class Coprothermobacteria 45 10 7
class Coriobacteriia 980 937 786 36 33 12 18 10 10 7 4
class Cytophagia 845 912 7 12 4 7 6 4
class Deferribacteres 89 234 1 1 4 4
class Dehalococcoidia 194 74 1 1 1 1 4
class Deinococci 219 603 7 13 1 5 7 4
class Deltaproteobacteria 941 934 646 33 20 12 14 12 10 7 4
class Dictyoglomia 65 2 1
class Dothideomycetes 1
class Elusimicrobia 75 7 7 19 3 5 7 1
class Endomicrobia 1
class Epsilonproteobacteria 463 504 266 10 3 2 7 7 7 4
class Erysipelotrichia 984 942 785 36 32 8 17 8 10 7 4
class Eurotiomycetes 1 1
class Fibrobacteria 221 81 186 2 1
class Fimbriimonadia 27 2 1
class Flavobacteriia 529 830 458 12 3 3 2 4 7 4
class Florideophyceae 10
class Fusobacteriia 582 479 144 7 4 2 2 5 6 4
class Gammaproteobacteria 982 943 719 36 31 12 18 12 10 7 4
class Gastropoda 74 1
class Gemmatimonadetes 40 4 1 15 1 4 7 1
class Gloeobacteria 8 1 1
class Halobacteria 1 2 1
class Heterolobosea 4
class Holophagae 499 437 2 5
class Hydrogenophilalia 233 444 6 1 1 1
class Ignavibacteria 670 31 2 16 2 6 4
class Insecta 7 106 11 1 4 1 1 4
class Ktedonobacteria 10 72 1 3
class Lentisphaeria 260 283 6 2 3 5 1 5 1
class Limnochordia 1 1
class Magnoliopsida 11 273 18 2 3 1
class Mammalia 1
class Methanobacteria 217 275 220 16 3 4 11 6 7
class Methanococci 1
class Methanomicrobia 7 6 10 1
class Methylacidiphilae 9 1 1
class Mollicutes 862 908 167 25 1 9 2 9 6 4
class Negativicutes 984 942 792 34 33 15 17 13 10 7 4
class Nitriliruptoria 41 502 3 1 1
class Nitrososphaeria 1 3
class Nitrospinia 5 3
class Nitrospira 46 165 1 1 6 4
class Oligoflexia 81 20 1 1 1 1 1 4
class Oligosphaeria 37 1
class Opitutae 360 573 96 1 3 2 3 4 4
class Phycisphaerae 2 1 4
class Pisoniviricetes 1
class Planctomycetia 101 12 1 1 4
class Rhodothermia 15 19
class Rubrobacteria 91 7 3 2 3
class Saccharomycetes 1 6
class Saprospiria 130 45 4
class Solibacteres 30 1
class Sordariomycetes 1
class Spartobacteria 52 18
class Sphingobacteriia 569 944 18 26 5 4 8 7 4
class Spirochaetia 169 420 16 4 4 1 4
class Synergistia 371 702 236 1 1 2 1 6 7 4
class Thermoanaerobaculia 77
class Thermococci 1 2 1
class Thermodesulfobacteria 22 98 2 1
class Thermodesulfovibrionia Umezawa et al. 2021 20
class Thermoflexia 4
class Thermoleophilia 78 18 1
class Thermolithobacteria 39
class Thermomicrobia 13 2 1
class Thermoplasmata 29 36 1
class Thermoprotei 4
class Thermotogae 18 39 1 6 4
class Tissierellia 944 936 512 14 9 5 8 10 7 4
class Tremellomycetes 1 13
class unclassified Cyanobacteria 1
class Verrucomicrobiae 883 825 492 26 14 15 13 7 10 3 4
class Vicinamibacteria 1
class Zetaproteobacteria 28 1 1 1
cohort Endopterygota 4 3
cohort Paraneoptera 2 101 11 1 1
cohort Polyneoptera 7 7 1 1
family Acanthopleuribacteraceae 54
family Acaryochloridaceae 3
family Acetobacteraceae 306 292 2 1 1 1 1 3 4
family Acholeplasmataceae 636 853 19 15 2 5 6 4
family Acidaminococcaceae 913 874 565 22 21 12 13 9 6 7 4
family Acidiferrobacteraceae 16 4
family Acidimicrobiaceae 293 119 2 3 1
family Acidithiobacillaceae 34 1 1
family Acidobacteriaceae 143 155 87 1 2 2 4
family Acidothermaceae 42 1
family Actinomycetaceae 861 748 634 24 28 5 8 1 10 7 4
family Actinopolymorphaceae 1 59 1
family Actinopolysporaceae 167 194 4 1
family Aerococcaceae 806 395 80 2 3 1 8 7 4
family Aeromonadaceae 193 215 7 4 1 1 3 1 2 4
family Akkermansiaceae 951 873 811 36 27 17 18 14 9 4 4
family Alcaligenaceae 190 935 6 10 3 1 2 7 4
family Alcanivoracaceae 19 101 1 1
family Algiphilaceae 40
family Alicyclobacillaceae 311 2 7 3 5 4
family Alsobacteraceae 2
family Alteromonadaceae 406 307 1 2 1 1 4
family Amaranthaceae 3
family Amoebophilaceae 2 827 1 5 1
family Anaerolineaceae 199 142 8 1 5 4
family Anaeromyxobacteraceae 567 1 1 1
family Anaeroplasmataceae 353 86 128 3 1 2 4 2
family anamorphic Herpotrichiellaceae 1
family Anaplasmataceae 21 235 1 1 1 2 4
family Aphanizomenonaceae 2 617 7 4
family Aphanothecaceae 3 1 1
family Aphididae 1 1
family Aquificaceae 15 7 2 3 3
family Archaeoglobaceae 1
family Archangiaceae 70 28 1 1
family Arcobacteraceae Waite et al. 2017 20 60 1 1 1 4
family Ardenticatenaceae 11 3 1
family Armatimonadaceae 1
family Aspergillaceae 1 1
family Atopobiaceae 596 337 165 10 4 1 7 3 4
family Aurantimonadaceae 16 10 1 1
family Azonexaceae 21 89 1 1
family Azospirillaceae 463 479 1 2 1 3 6 2 4
family Bacillaceae 739 862 232 31 1 5 12 9 7 4
family Bacillales Family X. Incertae Sedis 467 939 3 4 7
family Bacillidae 6 7 1 1
family bacterial virus 1
family Bacteriovoracaceae 39 7 1 1 1
family Bacteroidaceae 984 944 784 35 33 17 18 14 10 7 4
family Balneatrichaceae 11
family Balneicellaceae 9
family Balneolaceae 494 49 1 2 3
family Barnesiellaceae 849 513 11 17 6 18 5 8 4
family Bartonellaceae 11 31 1 4
family Bdellovibrionaceae 9 13 1 1 1 1
family Beijerinckiaceae 9 30 4
family Bernardetiaceae 103 2 1
family Beutenbergiaceae 1
family Bifidobacteriaceae 984 937 813 36 33 15 18 14 10 7 4
family Blastocatellaceae 18 1 1
family Blastochloridaceae 5 1
family Blastocystidae 2
family Blattabacteriaceae 1 4
family Bogoriellaceae 39 7 1
family Borreliaceae 2 13 1 4
family Boseaceae 7 1 1 4
family Brachyspiraceae 22 13 1 4
family Bradymonadaceae 1
family Bradyrhizobiaceae 51 31 12 1 1 1 1 4
family Breoghaniaceae 1
family Brevibacteriaceae 93 64 60 1 1 7 4
family Brevinemataceae 5 1
family Brucellaceae 44 84 25 4 1 1 2 4
family Bruguierivoracaceae Li et al. 2021 26 4 1 4
family Bryobacteraceae 18 1
family Budviciaceae 259 1 9 1 4
family Burkholderiaceae 323 840 28 17 3 3 1 8 7 4
family Caedimonadaceae 1
family Caldicoprobacteraceae 32 235
family Caldilineaceae 244 296 2 5 7 3
family Caldisericaceae 5 1
family Calditrichaceae 5 188 7 1
family Caliciviridae 1
family Calotrichaceae 98 384 1 6 4
family Campylobacteraceae 384 376 265 7 3 2 7 5 7 4
family Candidatus Babeliaceae 3
family Candidatus Brocadiaceae 10 1
family Candidatus Competibacteraceae 157 2 1
family Candidatus Desulfofervidaceae 1
family Candidatus Methanomethylophilaceae 23
family Candidatus Midichloriaceae 1 1
family Candidatus Nanopelagicaceae 1 3
family Candidatus Paracaedibacteraceae 1
family Candidatus Scalinduaceae Lodha et al. 2021 10
family Cardiobacteriaceae 126 17 2 1 1
family Carnobacteriaceae 557 596 324 5 12 5 3 1 7 7 4
family Catabacteriaceae 128 98 1 1 1 8 6
family Catalimonadaceae 44
family Catenulisporaceae 3 4
family Caulobacteraceae 134 430 9 1 4 3 1 4
family Celerinatantimonadaceae 6
family Cellulomonadaceae 73 53 4 1 4
family Cellvibrionaceae 62 58 1 4
family Cesiribacteraceae 40
family Chamaesiphonaceae 5 3
family Chelatococcaceae 3 3 1
family Chitinispirillaceae 13 2
family Chitinivibrionaceae 2
family Chitinophagaceae 767 458 5 5 1 1 7 6 4
family Chlamydiaceae 2 1 1 1
family Chlorobiaceae 71 758 1 1 2 4
family Chloroflexaceae 1 2 1
family Chlorogloeopsidaceae 13
family Christensenellaceae 216 180 24 26 2 14 9 7 4
family Chromatiaceae 489 765 2 1 3 3 6 4
family Chromobacteriaceae 95 128 1 1 4
family Chroococcaceae 1 388 2 1
family Chroococcidiopsidaceae 1 1 1
family Chrysiogenaceae 15 170 1 1
family Chrysomelidae 4
family Chthoniobacteraceae 12 18
family Chthonomonadaceae 96 5 3
family Clostridiaceae 984 943 788 36 33 15 17 12 10 7 4
family Clostridiales Family XI. Incertae Sedis 217
family Clostridiales Family XVI. Incertae Sedis 24 516 4 3 2 1
family Clostridiales Family XVII. Incertae Sedis 83 37 1 1 6 2 4
family Coccidae 81 3
family Coelosphaeriaceae 23
family Cohaesibacteraceae 1 1
family Coleofasciculaceae 3 5
family Colwelliaceae 158 1 1 4
family Comamonadaceae 199 838 111 3 2 9 3 6 4
family Conexibacteraceae 8 6
family Coprobacillaceae Verbarg et al. 2014 741 932 393 5 29 5 11 4 7
family Coprothermobacteraceae 45 10 7
family Coriobacteriaceae 875 938 781 34 23 10 18 9 7 4
family Corynebacteriaceae 571 459 445 8 12 2 7 8 1 4
family Coxiellaceae 37 27 2 1 1 1
family Crenotrichaceae 1
family Criblamydiaceae 43
family Crocinitomicaceae 29 3 1 1
family Cryomorphaceae 91 1 1
family Cryptococcaceae 13
family Cryptosporangiaceae 1
family Cryptosporidiidae 1
family Cyanobacteriaceae 30 149 1
family Cyanobacteriaceae 30 149 1
family Cyanobiaceae Salazar et al., 2020 5 3 1 1 4
family Cyanothecaceae 1
family Cyclobacteriaceae 265 1 4
family Cytophagaceae 686 865 3 4 1 5 6 4
family Debaryomycetaceae 1
family Deferribacteraceae 102 235 1 1 4 4
family Defluviitaleaceae 228 18 3 3 8
family Dehalococcoidaceae 42 74 1 1 1 1
family Deinococcaceae 142 443 6 1 1 1 4 4
family Demequinaceae 47 4 1
family Dermabacteraceae 76 148 56 1 4
family Dermacoccaceae 25 6 2 1 1 1
family Dermatophilaceae 6 1
family Dermocarpellaceae 1
family Desulfallaceae Watanabe et al. 2020 183 397 3 1 7 1
family Desulfarculaceae 217 1
family Desulfobacteraceae 586 206 2 2 4 6 2 4
family Desulfobulbaceae 87 10 1 1 1
family Desulfocapsaceae 13 3 1 1
family Desulfohalobiaceae 53 185 7 3
family Desulfomicrobiaceae 226 60 1 6 4
family Desulfonatronaceae 43 213 2
family Desulfovibrionaceae 868 907 646 32 20 12 14 12 10 7 4
family Desulfurellaceae 8 5 1
family Desulfurobacteriaceae 6 1
family Desulfuromonadaceae 102 461 3 5 4
family Devosiaceae 63 310 1 4
family Diapheromeridae 1
family Dictyoglomaceae 65 2 1
family Dientamoebidae 1
family Dietziaceae 125 45 2 1
family Dysgonomonadaceae 625 768 46 4 3 2 6 7 4
family Ectothiorhodospiraceae 225 618 1 3 6 2 4
family Edwardsiidae 36 1
family Eggerthellaceae 958 930 774 35 33 12 14 10 10 7 4
family Egibacteraceae 1
family Egicoccaceae 1
family Elioraeaceae 3
family Elusimicrobiaceae 56 7 7 3 1 1
family Emcibacteraceae 90
family Endomicrobiaceae 1
family Endozoicomonadaceae 4 1
family Enterobacteriaceae 622 911 592 32 29 10 17 12 10 7 4
family Enterococcaceae 320 855 139 28 28 4 11 4 6 4 4
family Entomoplasmataceae 70 418 1 3 2 4
family Eriococcidae 1 11
family Erwiniaceae 335 240 176 4 2 11 1 2 4
family Erysipelotrichaceae 984 942 785 36 32 7 17 8 10 7 4
family Erythrobacteraceae 42 82 2 1 1 4
family Eubacteriaceae 984 940 299 36 33 13 13 11 10 7 4
family Eubacteriales Family XII. Incertae Sedis 517 263 18 3 7 6
family Eubacteriales Family XIII. Incertae Sedis 905 783 656 31 18 4 12 1 10 7 4
family Euzebyaceae 35 501 1 1 1
family Fabaceae 11 271 2 3 1
family Fastidiosibacteraceae 15
family Faucheaceae 10
family Ferrimonadaceae 38 8 1
family Ferrovaceae 2
family Fervidobacteriaceae 11 1 1 4
family Fibrobacteraceae 209 81 140 2 1
family Fimbriimonadaceae 27 2 1
family Flammeovirgaceae 341 204 1 3 1 4
family Flavobacteriaceae 479 830 455 3 1 3 2 4 7 4
family Flexibacteraceae 8 1 2
family Fortieaceae 12
family Francisellaceae 74 36 2 2 1 4
family Frankiaceae 6 1 1 4
family Fulvivirgaceae 147 5 2 1 4
family Fusobacteriaceae 502 436 121 7 4 1 2 4 6 4
family Gaiellaceae 36 2
family Gallionellaceae 29 119 1 2 1
family Geminicoccaceae 29 1
family Gemmataceae 15 7 1 1 1
family Gemmatimonadaceae 24 4 1 1 1
family Geobacteraceae 65 57 1 1 4
family Geodermatophilaceae 101 10 1 1 4
family Gloeobacteraceae 8 1 1
family Gloeotrichiaceae 1
family Glycomycetaceae 127 45 1 1 1
family Gomontiellaceae 89 1 1
family Gomphosphaeriaceae 23
family Gordoniaceae 65 27 1 1 4
family Gottschalkiaceae 131 4 3 4
family Gracilibacteraceae 421 9 3 3 6
family Granulosicoccaceae 72 1
family great apes 1
family Hafniaceae 50 61 14 2 1 1 1
family Hahellaceae 170 98 2 1 3
family Halanaerobiaceae 215 171 1 3 5 2 4
family Halieaceae 59 1 1
family Haliscomenobacteraceae 67 3
family Haloarculaceae 1
family Halobacteriaceae 1 2 1
family Halobacteriaceae Clade I 1
family Halobacteriovoraceae 34 6 1 4
family Halobacteroidaceae 332 41 3 3 4 1
family Haloferacaceae 1 1
family Halomonadaceae 425 333 2 1 4 1 3 4
family Haloplasmataceae 30 1 1
family Halorubraceae 1
family Halothiobacillaceae 95 16 2
family Hapalosiphonaceae 1
family Helicobacteraceae 41 270 3 1 1 1 4
family Heliobacteriaceae 168 397 4 2 3 6 5 1
family Herpetosiphonaceae 3 1
family Heteroleibleiniaceae 8
family Holophagaceae 458 437 2 4
family Holosporaceae 1 3
family Hungateiclostridiaceae 728 595 142 35 7 2 6 8 6 4
family Hydrogenophilaceae 240 445 5 1 1 1
family Hydrogenothermaceae 25 1 1
family Hyellaceae 1
family Hymenobacteraceae 190 645 2 1 4 1 4
family Hyphomicrobiaceae 106 424 1 1 5 4
family Hyphomonadaceae 516 58 1 1 4 3 2
family Iamiaceae 20
family Ichthyobacteriaceae 1
family Idiomarinaceae 24 39 1 1 1
family Ignavibacteriaceae 43 31 1 1
family Ilumatobacteraceae 74
family Immundisolibacteraceae 3
family Intrasporangiaceae 64 38 1 4
family Isosphaeraceae 5 5 1 4
family Jatrophihabitantaceae 6 1
family Jiangellaceae 5 12 1 4
family Jonesiaceae 95 16
family Kaistiaceae 35 10 1
family Kallotenuaceae 13
family Kangiellaceae 29 1
family Kiloniellaceae 413 213 5 1
family Kineosporiaceae 40 11 1 1
family Kofleriaceae 25 71 3
family Kordiimonadaceae 105
family Kosmotogaceae 1 10 1 1
family Kribbellaceae 259 52 5
family Ktedonobacteraceae 1
family Kytococcaceae 1 2 1
family Labilitrichaceae 36
family Lachnospiraceae 984 944 791 36 33 17 18 14 10 7 4
family Lacipirellulaceae 7
family Lactobacillaceae 984 925 813 36 28 12 18 11 10 7 4
family Lawsonellaceae 1
family Legionellaceae 69 601 1 1 4 3 4
family Lentisphaeraceae 4
family Leptolyngbyaceae 2 218 1 1 2 4
family Leptospiraceae 47 260 4 2 4
family Leptotrichiaceae 179 112 38 2 1 1 4
family Leuconostocaceae 900 728 103 9 3 1 2 4 8 6 4
family Lewinellaceae 8 45
family Limnochordaceae 1 1
family Listeriaceae 222 614 1 1 1 4 2 1 4
family Litoricolaceae 29 49 3
family Luteibaculaceae Bowman 2020 1
family Magnetococcaceae 18 1 1
family Maricaulaceae 30 8 1
family Marinifilaceae 252 1 4 4
family Marinilabiliaceae 503 1 7 5 1
family Marinobacteraceae Liao et al. 2020 147 47 1 1 4
family Mariprofundaceae 28 1 1 1
family Marivirgaceae 2 2 1
family Melioribacteraceae 662 16 2 6 4
family Merismopediaceae 3
family Mesoaciditogaceae 5
family Methanobacteriaceae 212 275 220 3 3 4 11 5 1
family Methanococcaceae 1
family Methanocorpusculaceae 1 3 1
family Methanomassiliicoccaceae 29 31 1
family Methanoregulaceae 2
family Methanosarcinaceae 3 4 1
family Methanotrichaceae 1
family Methylacidiphilaceae 9 1 1
family Methylobacteriaceae 52 52 5 1 4
family Methylococcaceae 181 3 1 3 4
family Methylocystaceae 24 12 1 4
family Methylophilaceae 259 405 1 1 2 1
family Methylothermaceae 47
family Microbacteriaceae 557 319 49 2 3 3 5 4
family Microbulbiferaceae 1 3 1 4
family Micrococcaceae 513 371 151 25 22 4 1 4 6 4
family Microcoleaceae 280 202 1 1 4
family Microcystaceae 4 2 1
family Micromonosporaceae 204 275 1 1 1 2 6 4
family Micropepsaceae 11
family Microscillaceae 119 1
family Microviridae 7
family Mooreiaceae 9
family Moraxellaceae 482 477 21 7 2 1 5 3 6 6 4
family Morganellaceae 466 135 17 17 1 2 10 9 7 4
family Moritellaceae 1 1 1
family Motilibacteraceae 5
family Muribaculaceae 2 4
family Mycobacteriaceae 93 161 59 2 1 2 1 4
family Mycoplasmataceae 688 785 11 6 2 6 5 4
family Mycoplasmoidaceae 13
family Myoviridae 1
family Myxococcaceae 4 1 4
family Mzabimycetaceae 135
family Nakamurellaceae 2 1 4
family Nannocystaceae 25 60 1
family Natranaerobiaceae 30 1
family Nautiliaceae 27 3 1 2 1
family Neisseriaceae 173 293 68 10 5 2 3 1 4 7 4
family Neomegalonemataceae 20 1
family Nitratiruptoraceae Waite et al. 2017 1 1
family Nitriliruptoraceae 6 5 2
family Nitrosomonadaceae 312 7 8 4 3 2 4
family Nitrosopumilaceae 2 1
family Nitrososphaeraceae 1 3
family Nitrospinaceae 5 3
family Nitrospiraceae 46 165 1 1 5 4
family Nocardiaceae 11 89 21 1 2 1 4
family Nocardioidaceae 374 127 1 2 6 4
family Nocardiopsaceae 276 1 2 1 4
family Nostocaceae 3 787 2 1 1 7 4
family Oceanospirillaceae 257 223 1 1 4
family Odoribacteraceae 909 886 619 33 25 9 16 12 9 7 4
family Oleiphilaceae 3
family Oligosphaeraceae 37
family Opitutaceae 37 6 3 1 1 4
family Orbaceae 4 1 4
family Ornithinimicrobiaceae 19 23 1 4
family Oscillatoriaceae 101 431 4
family Oscillospiraceae 984 943 788 36 33 17 18 14 10 7 4
family Oxalobacteraceae 451 604 259 25 2 2 8 6 7 4
family Paenibacillaceae 825 736 1 29 4 6 6 7 4
family Paludibacteraceae 129 3 1 3 2 2 1 4
family Parachlamydiaceae 2 2 1
family Parvibaculaceae 2 4
family Parvoviridae 2
family Parvularculaceae 24 1
family Pasteurellaceae 803 774 548 29 15 6 17 4 6 7 4
family Pasteuriaceae 36
family Patulibacteraceae 3 1
family Pectobacteriaceae 405 44 2 1 1 1 3 4
family Pelagibacteraceae 4 1 1
family Peptococcaceae 909 931 521 24 3 6 9 9 7 4
family Peptoniphilaceae 918 914 505 7 8 4 8 10 7 4
family Peptostreptococcaceae 979 840 789 30 32 6 15 5 10 7 4
family Perlucidibacaceae Liao et al. 2020 3
family Persicobacteraceae 69 1 1 4
family Petrotogaceae 6 15 1 6 4
family phages with long non-contractile tails 1
family Phreatobacteraceae 1 1
family Phycisphaeraceae 2 1
family Phyllobacteriaceae 33 11 35 1 1 4
family Pirellulaceae Dedysh et al. 2020 36 3 1
family Piscirickettsiaceae 264 135 2 3 1 4
family Planctomycetaceae 94 6 1 1
family Planococcaceae 800 446 39 22 2 6 10 7 4
family Pleioneaceae 2
family Pleomorphomonadaceae 6 3 1
family Polyangiaceae 3 40 1 1 4
family Porphyromonadaceae 977 942 524 35 19 6 10 10 7 4
family Porticoccaceae 1
family Prevotellaceae 983 928 568 21 12 12 17 10 7 4
family Prochloraceae 2 2 1 4
family Prochlorococcaceae 1
family Prochlorotrichaceae 3 3
family Prolixibacteraceae 134 1 4 1
family Promicromonosporaceae 47 3 1 1 4
family Propionibacteriaceae 398 40 118 13 9 1 4 4 4
family Proteidae 5 1
family Proteinivoraceae 423 731 3 7 7
family Pseudanabaenaceae 2 282 2 4
family Pseudoalteromonadaceae 36 22 1 1 4
family Pseudococcidae 2 22 1
family Pseudomonadaceae 359 221 51 9 2 2 11 2 5 4
family Pseudonocardiaceae 294 253 1 2 4 4
family Pseudoxanthobacteraceae 5
family Psychromonadaceae 23 11 4
family Puniceicoccaceae 348 568 7 1 3 4 1
family Pyrinomonadaceae 37
family Rarobacteraceae 55
family Reichenbachiellaceae 39
family Reyranellaceae 5
family Rhabdochlamydiaceae 70
family Rhizobiaceae 82 233 8 14 1 1 1 7 4
family Rhodanobacteraceae 179 642 1 2 3 4
family Rhodobacteraceae 250 173 4 4 1 1 1 4 7 4
family Rhodobiaceae 7 1 3 4
family Rhodocyclaceae 338 572 70 1 1 1 1
family Rhodospirillaceae 748 769 370 25 1 8 9 7 4
family Rhodothalassiaceae 12 6 1
family Rhodothermaceae 121 864 6 2 6 1 4
family Rhodovibrionaceae 382 196 1 7
family Rickettsiaceae 212 499 1 2 6 4
family Rikenellaceae 970 18 733 35 32 15 18 13 9 7 4
family Rivulariaceae 98 421 6 4
family Robiginitomaculaceae 40 2
family Roseiarcaceae 4
family Roseiflexaceae 9 1 1
family Roseivirgaceae 40
family Roseobacteraceae Pujalte et al. 2014 50 41 1 1 2 4
family Ruaniaceae 1
family Rubricoccaceae 6
family Rubritaleaceae 144 307 3 1
family Rubrobacteraceae 60 7 3 2 3
family Ruminococcaceae 984 944 788 36 26 5 18 14 10 7 4
family Saccharomycetaceae 1 5
family Saccharospirillaceae 387 18 1 1
family Salinibacteraceae 2
family Salinisphaeraceae 15 1
family Salinivirgaceae 1
family Salisaetaceae 108 207 1 3
family Sandaracinaceae 6 1
family Sanguibacteraceae 2 3 1 1
family Saprospiraceae 43 45 1
family Schleiferiaceae 18 1
family Scytonemataceae 2 4
family Sedimentisphaeraceae 1 3
family Segniliparaceae 31 2 1
family Selenomonadaceae 566 929 99 12 5 6 10 7 4
family Shewanellaceae 124 568 2 1 5 4
family Simkaniaceae 6 1
family Sinobacteraceae 129 666 2 1 1 1
family Sneathiellaceae 5
family Solanaceae 11
family Solibacteraceae 1 1 1
family Solirubrobacteraceae 20 10
family Sphaerobacteraceae 25 1
family Sphaerochaetaceae 3 3 1 1
family Sphingobacteriaceae 569 943 4 24 5 4 8 7 4
family Sphingomonadaceae 551 308 17 14 2 1 5 6 4
family Sphingosinicellaceae 8 1 4
family Spirillaceae 3 14
family Spirochaetaceae 111 224 1 3 1 4
family Spiroplasmataceae 334 5 5 4
family Spirosomaceae 566 755 2 3 4 6 4
family Spirulinaceae 9
family Spongiibacteraceae 177 1
family Sporichthyaceae 8 3
family Sporolactobacillaceae 128 283 2 1 1
family Sporomusaceae 668 638 34 3 4 7 4
family Staphylinidae 3
family Staphylococcaceae 291 747 207 3 3 3 5 2 5 5 4
family Stappiaceae 2 1 4
family Stellaceae 180 1
family Steroidobacteraceae 29 9
family Sterolibacteriaceae 62 151 11 1 4
family Streptococcaceae 981 937 774 36 32 12 16 10 10 7 4
family Streptomycetaceae 185 185 2 1 2 6 4
family Streptosporangiaceae 142 353 1 2 1
family Succinivibrionaceae 240 237 15 2 1 3
family Sulfolobaceae 3
family Sulfuricellaceae Watanabe et al. 2014 6 1 1
family Sulfurovaceae Waite et al. 2017 5 1 1
family Sutterellaceae 976 934 713 36 29 12 18 11 10 7 3
family Symbiobacteriaceae 252 559 3 6 3
family Synechococcaceae 7 284 1 1 4
family Synergistaceae 371 700 236 1 1 2 1 6 7 4
family Syntrophaceae 55 153 1 1 1 4
family Syntrophobacteraceae 383 302 2 2 1
family Syntrophomonadaceae 420 773 11 3 3 5 4
family Syntrophorhabdaceae 35 1
family Syntrophotaleaceae 2
family Tannerellaceae 949 938 719 34 33 14 18 12 10 7 4
family Temperatibacteraceae 1
family Tepidamorphaceae 2
family Tepidanaerobacteraceae 10 306 1 2 1
family Terasakiellaceae 1
family Terrimicrobiaceae 4
family Thalassobaculaceae 2 44 1
family Thalassospiraceae 21 213 358 1
family Thermaceae 89 365 1 1 2 5 4
family Thermoactinomycetaceae 462 565 1 4 3 6 4
family Thermoanaerobacteraceae 286 808 212 4 5 4 4
family Thermoanaerobacterales Family III. Incertae Sedis 146 907 1 4 8 7 4
family Thermoanaerobacterales Family IV. Incertae Sedis 21 1
family Thermoanaerobaculaceae 77
family Thermococcaceae 1 2 1
family Thermodesulfobacteriaceae 22 98 2 1
family Thermodesulfobiaceae 52 11 17 5 2 2 1
family Thermodesulfovibrionaceae 13 163 6 3
family Thermoflexaceae 4
family Thermoflexibacteraceae 99
family Thermogemmatisporaceae 7 72 3
family Thermoguttaceae Dedysh et al. 2020 37 1
family Thermohalobacteraceae Spring 2020 741 4 4 7
family Thermoleophilaceae 31 1
family Thermolithobacteraceae 39
family Thermomicrobiaceae 1
family Thermomonosporaceae 59 232 1 1 3 4
family Thermonemataceae 17 3
family Thermoproteaceae 1
family Thermosediminibacteraceae 41 65 6 1
family Thermosporotrichaceae 3
family Thermosynechococcaceae 1
family Thermotogaceae 1 39 1 6 4
family Thermotomaculaceae 14 1
family Thioalkalibacteraceae 1 10
family Thioalkalispiraceae 49 1 3
family Thiobacillaceae 59 137 6 1 1
family Thiofilaceae 2
family Thiolinaceae 2
family Thioprofundaceae 6
family Thiotrichaceae 68 624 1 3 1 3 1
family Thiovulaceae Waite et al. 2017 12 1 1 3
family Thorselliaceae 44
family Tissierellaceae 442 58 1 2 1 4 4 3 4
family Treponemataceae 52 223 1 3 1 4
family Trichocoleusaceae 2
family Trichocomaceae 1
family Tropherymataceae 52 1
family Trueperaceae 12
family Tsukamurellaceae 3 54 1 4
family Turicibacteraceae Verbarg et al. 2014 588 647 474 8 13 6 11 1 7 5 4
family unclassified Actinobacteria (class) (miscellaneous) 1
family unclassified Bacillales 19 40
family unclassified Burkholderiales 199 200 19 15 3 3 4
family unclassified Clostridiales 721 783 35 30 4 1 3 8 4
family unclassified Rickettsiales 4
family Unionidae 124
family Vallitaleaceae Quemeneur et al. 56 3 4 8
family Veillonellaceae 977 943 744 32 29 11 16 6 10 7 4
family Verrucomicrobia subdivision 3 9 8 2
family Verrucomicrobiaceae 172 823 220 3 1 2 3 1
family Vibrionaceae 91 69 7 4 4
family Vicinamibacteraceae 1
family Victivallaceae 255 283 6 2 2 5 5
family Viviparidae 74 1
family Waddliaceae 1 5
family Weeksellaceae 91 26 8 1 1 1 4
family Wenzhouxiangellaceae 37 1
family Woeseiaceae 1
family Xanthobacteraceae 14 22 1 6 1
family Xanthomonadaceae 265 760 19 4 7 4 6 4
family Xenococcaceae 1
family Yersiniaceae 173 701 20 6 4 13 9 4
family Zoogloeaceae 137 230 1 1 1 2 1 3 4
family Zymomonadaceae 1 1 1
forma specialis Buchnera aphidicola (Acyrthosiphon kondoi) 1
forma specialis Buchnera aphidicola (Acyrthosiphon pisum) 2
forma specialis Buchnera aphidicola (Aphis glycines) 1
forma specialis Buchnera aphidicola (Cinara cedri) 1
forma specialis Buchnera aphidicola (Cinara confinis) 1
forma specialis Buchnera aphidicola (Cinara pseudotaxifoliae) 1
forma specialis Buchnera aphidicola (Cinara tujafilina) 1
forma specialis Buchnera aphidicola (Diuraphis noxia) 1
forma specialis Buchnera aphidicola (Myzus persicae) 4
forma specialis Buchnera aphidicola (Schizaphis graminum) 1
forma specialis Buchnera aphidicola (Schlechtendalia chinensis) 1
forma specialis Buchnera aphidicola (Tuberolachnus salignus) 1
forma specialis Buchnera aphidicola (Uroleucon ambrosiae) 1
forma specialis cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1
forma specialis endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1
forma specialis primary endosymbiont of Heteropsylla cubana 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 1
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans 4
forma specialis Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 3
genus 1
genus 1
genus 1
genus 1
genus 1
genus 'Kouleothrix' 1
genus 'Terrahaemophilus' 1
genus Abiotrophia 109 51 9 2 2 2
genus Absiella 374 400 13 1 6 1
genus Abyssivirga 1
genus Acanthopleuribacter 54
genus Acaryochloris 3
genus Accumulibacter 3
genus Acetanaerobacterium 462 123 1 3 8
genus Acetatifactor 885 2 3 4
genus Acetilactobacillus 3
genus Acetitomaculum 674 138 1 3 3
genus Acetivibrio 906 929 32 26 1 5 8 7 4
genus Acetoanaerobium 527 4 6 1
genus Acetobacter 15 4 1 1 3
genus Acetobacterium 408 924 2 4 6 7 4
genus Acetobacteroides 245
genus Acetohalobium 2 35 1 1
genus Acetomicrobium 32 9 1
genus Acetonema 227 2 2
genus Acholeplasma 635 651 6 1 2 5 3 4
genus Achromatium 10
genus Achromobacter 78 1 9 1 1 2 4
genus Acidaminobacter 261 223 3 5 3
genus Acidaminococcus 509 671 96 4 1 3 5 3 3 4
genus Acidianus 1
genus Acidibacter 48
genus Acidibrevibacterium 1
genus Acidicaldus 1
genus Acidicapsa 58 1
genus Acidiferrobacter 10 3
genus Acidihalobacter 1 1
genus Acidimicrobium 106 1 1
genus Acidiphilium 16 26 1 1
genus Acidipropionibacterium 12 1 1 4
genus Acidisoma 1
genus Acidisphaera 1
genus Aciditerrimonas 125 2
genus Acidithiobacillus 34 1 1
genus Acidobacterium 1 3
genus Acidocella 1 1
genus Acidothermus 42 1
genus Acidovorax 33 51 1 1 1 4 4
genus Acinetobacter 271 202 16 6 2 1 5 3 1 4 4
genus Acrocarpospora 4
genus Actibacter 1
genus Actimicrobium 2
genus Actinoallomurus 2
genus Actinoalloteichus 4
genus Actinobacillus 256 545 90 7 4 1 5 4
genus Actinobaculum 7 69 18 6 2 1
genus Actinocatenispora 75 242 1
genus Actinocorallia 4 3 2
genus Actinokineospora 4 3
genus Actinomadura 33 29 1 2 1
genus Actinomyces 772 690 580 10 28 4 5 9 7 4
genus Actinomycetospora 2 5
genus Actinoplanes 78 8 1 4
genus Actinopolymorpha 1 59 1
genus Actinopolyspora 164 194 4 1
genus Actinosynnema 1
genus Actinotignum 55 13 29 3
genus Acutalibacter 8
genus Adhaeribacter 32
genus Adlercreutzia 686 537 5 24 8 6 1 1 6 1
genus Advenella 5 1 3
genus Aequorivita 9 1 2 1
genus Aeribacillus 24 1 1
genus Aeriscardovia 142
genus Aerococcus 258 22 16 1 2 4
genus Aeromicrobium 3 9 1 3 1
genus Aeromonas 126 7 4 1 1 4
genus Aerosphaera 48
genus Aerosticca Watanabe et al. 2020 3
genus Aestuariibacter 2
genus Aestuariispira 418 2
genus Afipia 1 3
genus Agaribacter 265
genus Agarilytica 1
genus Agarivorans 21 1
genus Agathobacter 1 1
genus Agathobaculum 926 1 8 28 3 9
genus Aggregatibacter 178 263 172 2 3 2 1 4 5 1
genus Aggregicoccus 1
genus Agreia 2
genus Agrilactobacillus 123 3
genus Agrobacterium 36 1 4
genus Agrococcus 2 18 3 1 1
genus Agromyces 77 162 1 2 1 1
genus Ahniella 1
genus Ahrensia 1
genus Akkermansia 951 874 811 36 27 17 18 14 9 4 4
genus Albibacterium 1
genus Albidovulum 1 1
genus Albimonas 2
genus Alcaligenes 13 2 1 3
genus Alcanivorax 10 101 1 1
genus Algibacter 3 2 1
genus Algicola 34
genus Algimonas 12 2
genus Algiphilus 40
genus Algivirga 1
genus Algorimarina 1
genus Algoriphagus 106 1 3
genus Aliarcobacter 3 40 1 1 4
genus Alicycliphilus 1 7 3 1
genus Alicyclobacillus 100 2 3 3 3 3
genus Aliicoccus 1
genus Aliidiomarina 15
genus Aliifodinibius 180
genus Aliihoeflea 1
genus Aliivibrio 1 1
genus Alishewanella 50 154 2
genus Alistipes 970 733 33 32 13 11 13 9 7 4
genus Alkalibacillus 4 57
genus Alkalibacter 81 2 3
genus Alkalibacterium 5 310 1 1 7
genus Alkalibaculum 197 1 2
genus Alkalicoccus 33
genus Alkaliflexus 40 3
genus Alkalihalobacillus 19 12 8 1 3
genus Alkalilimnicola 1
genus Alkalimarinus 16
genus Alkaliphilus 259 927 4 3 5 7 4
genus Alkalispirillum 1
genus Alkalispirochaeta 1
genus Alkalitalea 1
genus Alkanibacter 1
genus Alkanindiges 3 1
genus Allisonella 178 68 3 2
genus Alloactinosynnema 4
genus Allobacillus 2
genus Allobaculum 147 88 8 2 2
genus Allocatelliglobosispora 1
genus Allochromatium 47 1
genus Allofrancisella 6 1
genus Allofustis 21 2 2
genus Allohahella 69 97 2
genus Alloiococcus 69 3 1
genus Allokutzneria 1 1
genus Alloprevotella 390 8 83 2 3 1
genus Alloscardovia 144 58 19 2
genus Allosphingosinicella 18
genus Alsobacter 2
genus Alteracholeplasma 38 21 1 1 1
genus Altererythrobacter 9 2 1 4
genus Alteribacillus 2
genus Alteribacter 13
genus Alterileibacterium 2 5
genus Alterococcus 19 1
genus Alteromonas 24 1 4
genus Altibacter 1
genus Alysiella 4
genus Amaricoccus 3 31 2
genus Amedibacillus 306 614 12 1 1 6 2
genus Aminicella 510 1
genus Aminiphilus 4 85 5
genus Aminipila 1 1 4
genus Aminivibrio 59
genus Aminobacter 1 5 1
genus Aminobacterium 12 41 3 1
genus Aminomonas 44 4
genus Ammonifex 11 308
genus Ammoniphilus 30 39
genus Amoebophilus 2 827 1 5 1
genus Amphibacillus 22 4
genus Amphritea 3 21
genus Amycolatopsis 4 11 1 1 4
genus Amylibacter 3
genus Amylolactobacillus 2
genus Anabaena 1 3
genus Anabaenopsis 1
genus Anaerobacillus 1 217 20
genus Anaerobacter 59
genus Anaerobacterium 26 47 3 1 3
genus Anaerobiospirillum 15 1 2
genus Anaerobium 259 19 1 8
genus Anaerobranca 405 732 1 5 7
genus Anaerobutyricum 912 1 32 28 4 11 8 4
genus Anaerocella 156
genus Anaerococcus 559 412 373 5 1 1 5 7 4
genus Anaerocolumna 776 8 4 4
genus Anaerofilum 499 930 249 8 2 2 10 7
genus Anaerofustis 581 167 203 9 1 6
genus Anaeroglobus 513 14 5
genus Anaerolinea 58 55 4 1 2 1
genus Anaeromassilibacillus 9 6 1
genus Anaeromusa 10 98 2
genus Anaeromyxobacter 567 1 1 1
genus Anaerophaga 10
genus Anaeroplasma 161 86 48 1 1 2
genus Anaerorhabdus 18
genus Anaerosacchariphilus 1 13
genus Anaerosalibacter 201
genus Anaerosinus 14 34 2
genus Anaerosphaera 108 2
genus Anaerospora 155 3
genus Anaerosporobacter 530 550 5 1
genus Anaerostipes 981 833 780 36 33 14 12 12 10 7 4
genus Anaerotaenia 3 1
genus Anaerotignum 902 21 5 4 3 9 4
genus Anaerotruncus 800 909 730 29 19 5 7 10 7
genus Anaerovibrio 7 835 9 1 3 7 1
genus Anaerovorax 29 276 13 1 2
genus Anaplasma 7 1
genus Ancylobacter 6
genus Anderseniella 1 4
genus Andreesenia 7
genus Andreprevotia 1
genus Aneurinibacillus 40 3 1 1
genus Angelakisella 21 4
genus Annandia 2
genus Annwoodia 1
genus Anoxybacillus 36 56 3 1 1 1 1 1
genus Anoxybacter 1 1 4
genus Anoxynatronum 606 3
genus Anseongella 1
genus Antarctobacter 1
genus Apibacter 1 1
genus Apilactobacillus 6 3
genus Aquabacterium 46 5 5 1 1
genus Aquamicrobium 11
genus Aquaspirillum 28
genus Aquibacter 7 1
genus Aquicella 9
genus Aquiflexum 11 1
genus Aquihabitans 15
genus Aquiluna 1
genus Aquimarina 19 4 1 4
genus Aquimonas 18 6
genus Aquincola 9
genus Aquipuribacter 4
genus Aquirhabdus 1
genus Aquisalibacillus 1
genus Aquisalimonas 64
genus Aquisphaera 2
genus Aquitalea 2 11 1 4
genus Arabia 1 1 1
genus Arachidicoccus 1 3
genus Arachnia 1 1 2 1
genus Arcanobacterium 26 30 31 1 1 2
genus Archaeoglobus 1
genus Archangium 10 1
genus Arcicella 88 2
genus Arcobacter 20 60 1 1 1 4
genus Arcobacter group 18 48 1 1 1 4
genus Arcticibacterium 1
genus Ardenticatena 11 2
genus Arenibacter 1 3 3
genus Arenimonas 33 5
genus Arhodomonas 11
genus Aridibacter 18
genus Armatimonas 1
genus Aromatoleum 1
genus Arsenicicoccus 1
genus Arsenophonus 28 21 1
genus Arthrobacter 4 125 10 1 1 2 1 4
genus Arthromitus 1 4
genus Arthronema 4
genus Arthrospira 4 10 1 1
genus Asaccharobacter 11 1 7
genus Asaccharospora 99 1
genus Asaia 4 1
genus Asinibacterium 10
genus Aspergillus 1 1
genus Asteroleplasma 240 73 1 3
genus Asticcacaulis 50 359 1 1
genus Atelocyanobacterium 1
genus Atlantibacter 1
genus Atopobacter 4
genus Atopobium 322 313 98 3 2 4 3 1
genus Atopococcus 13
genus Atopomonas 5
genus Atopostipes 56 2
genus Aurantiacibacter 13 1
genus Aurantimicrobium 1
genus Aurantimonas 8
genus Auraticoccus 3 3
genus Aureibacter 4
genus Aureicoccus 1
genus Aureimonas 12 1
genus Aureispira 1
genus Aureitalea 3
genus Auricoccus 1
genus Auritidibacter 1
genus Austwickia 1
genus Avibacterium 61 95 2 4 1
genus Azoarcus 4 63 1 1 1
genus Azohydromonas 2 8
genus Azomonas 2
genus Azonexus 19 1
genus Azorhizobium 2 5
genus Azorhizophilus 2
genus Azospira 3 1 9 1 1
genus Azospirillum 296 175 2 1 3 6 2 4
genus Azotobacter 4 1
genus Babela 2
genus Bacillus 6 7 1 1
genus Bacillus 425 608 66 27 1 2 8 7 6 4
genus Bacteria 1
genus Bacterioplanes 1 1
genus Bacteriovorax 29 7 1
genus Bacteroides 984 944 784 35 33 16 18 14 10 7 4
genus Baia 77
genus Balneatrix 11
genus Balneola 180 49
genus Bariatricus 1 3
genus Barnesiella 798 412 4 14 6 2 5 8 4
genus Barrientosiimonas 23
genus Bartonella 11 31 1 4
genus Basfia 3 1 1
genus Basilea 3 1
genus Bdellovibrio 9 13 1 1 1 1
genus Beduini 1 1
genus Beggiatoa 1 1
genus Beijerinckia 2 1
genus Belliella 17 3
genus Bellilinea 3
genus Belnapia 2 1
genus Bergeyella 14 5
genus Bernardetia 80 1
genus Berryella Wylensek et al. 2020 3 1 1
genus Beutenbergia 1
genus Bibersteinia 2 1 1
genus Bifidobacterium 984 937 813 36 33 15 18 11 10 6 4
genus Bigelowiella 2 2
genus Bilophila 3 855 605 32 20 12 14 11 10 7
genus Biomaibacter 1
genus Biostraticola 26
genus Bisgaardia 61 1
genus Bittarella 8 5 1
genus Bizionia 2
genus Blastocatella 1
genus Blastochloris 5 1
genus Blastococcus 1 3 1 1
genus Blastocystis 2
genus Blastomonas 7 1
genus Blastopirellula 17
genus Blattabacterium 1 4
genus Blautia 984 944 789 36 32 15 18 14 10 7 4
genus Blochmannia 251 6 4
genus Bogoriella 8
genus Bombilactobacillus 84
genus Bombiscardovia 12 10
genus Bordetella 42 1 4
genus Borrelia 2 13 4
genus Borreliella 4
genus Bosea 7 1 1 4
genus Bosea 3
genus Boseongicola 2
genus Boudabousia 18
genus Bounagaea 1
genus Bowdeniella 18
genus Bowmanella 57
genus Brachybacterium 18 133 5 1 1
genus Brachymonas 3
genus Brachyspira 22 13 1 4
genus Brackiella 15
genus Bradymonas 1
genus Bradyrhizobium 2 24 11 1 1 4
genus Brassicibacter 666 4 3 4
genus Brenneria 367 30 1 3 1
genus Breoghania 1
genus Brevefilum 1
genus Brevibacillus 69 92 1 1 1 4
genus Brevibacterium 91 64 60 1 1 7 4
genus Brevifollis 9
genus Brevinema 5 1
genus Brevirhabdus 1
genus Brevundimonas 35 19 7 1 3 2 4
genus Breznakia 3
genus Breznakibacter 16 2
genus Brochothrix 9 545 1 1 1 1
genus Brockia 18
genus Brucella 1 11 4 1 2
genus Bruchidius 4
genus Bryobacter 18
genus Buchnera 1 4
genus Bulleidia 55 177 2 2 5
genus Burkholderia 35 265 1 11 1 1 5 4
genus Buttiauxella 117 1
genus Butyribacter 1 1
genus Butyricicoccus 562 78 34 30 4 1 11 7
genus Butyricimonas 811 741 455 29 11 5 15 6 8 7 4
genus Butyrivibrio 959 622 416 28 28 6 3 8 7 4
genus Bythopirellula 7
genus Caballeronia 16 4
genus Caedibacter 3
genus Caenispirillum 18
genus Caldalkalibacillus 119 2
genus Caldanaerobacter 110 38 1 1 1
genus Caldanaerobius 34 3
genus Caldanaerovirga 3
genus Caldibacillus 1 1 3
genus Caldicellulosiruptor 72 847 1 4 8 6 4
genus Caldicoprobacter 32 119
genus Caldilinea 8 296 7 3
genus Caldimicrobium 2 1
genus Caldimonas 15
genus Caldinitratiruptor 246 6
genus Caldisalinibacter 419 1
genus Caldisericum 5 1
genus Calditerricola 2
genus Calditerrivibrio 3 1
genus Caldithrix 5 188 7 1
genus Calochaete 12
genus Caloramator 642 922 1 9 2 5 8 7
genus Caloranaerobacter 2 6
genus Caloribacterium 12
genus Calothrix 98 384 6 4
genus Camelimonas 3
genus Caminibacter 1 1 2
genus Caminicella 599 16 2
genus Campylobacter 369 339 263 7 3 2 7 5 7 4
genus Candidatus Azobacteroides 60 4
genus Candidatus Desulforudis 1
genus Candidatus Methanoregula Brauer et al. 2006 1
genus Candidatus Nitrosoglobus 1
genus Candidatus Tenderia Eddie et al. 2016 1
genus Candidatus Velamenicoccus Kizina et al. 2022 1
genus Candidatus Viadribacter Braun and Szewzyk 2016 4
genus Candidatus Walczuchella 1
genus Candidimonas 1
genus Canicola 53
genus Canis 1
genus Capnocytophaga 11 12 2 1 1 1 4
genus Caproiciproducens 1 29 1 8 4
genus Carboxydocella 24 516 4 3 2 1
genus Carboxydothermus 11 4
genus Carboxylicivirga 237 1 1
genus Cardinium 1
genus Cardiobacterium 104 17 2 1
genus Carnimonas 16
genus Carnobacterium 4 37 8 1 1 2 4
genus Carsonella 1
genus Casaltella 614 3 5
genus Castellaniella 1
genus Catabacter 128 97 1 1 8 6
genus Catellatispora 1
genus Catellicoccus 1
genus Catenibacterium 319 292 292 12 2 8 2 2
genus Catenisphaera 73 1 2
genus Catenovulum 1 1
genus Catenulispora 3 4
genus Catonella 951 687 1 16 1 3 5 4
genus Caulobacter 15 7 1 1 4
genus Cecembia 13
genus Cedecea 91 1
genus Celeribacter 3
genus Celerinatantimonas 6
genus Cellulomonas 73 12 4 1 4
genus Cellulophaga 4 2 4
genus Cellulosibacter 81
genus Cellulosilyticum 904 15 2 1 9 4
genus Cellulosimicrobium 2 1 1
genus Cellvibrio 37 6 1 3
genus Centipeda 6
genus Cerasicoccus 190 238 1 2 1
genus Cereibacter 9 1 2
genus Cesiribacter 31
genus Cetobacterium 50 51 4 2 1
genus Chamaesiphon 5 3
genus Chania 10 3
genus Chelativorans 6 1
genus Chelatococcus 3 1
genus Chelonobacter 1 23 1
genus Chiayiivirga 1
genus Chishuiella 5
genus Chitinilyticum 3
genus Chitinimonas 20 1
genus Chitinispirillum 13 2
genus Chitinivibrio 2
genus Chitinivorax 11
genus Chitinophaga 31 29 3 1 4
genus Chlamydia 2 1 1 1
genus Chloracidobacterium 14 3
genus Chlorobaculum 3 757 1 1 2 4
genus Chlorobium 3 1 1
genus Chloroflexus 1 1
genus Chlorogloeopsis 13
genus Chloroherpeton 19 6
genus Chondrocystis 1
genus Chondromyces 1 40
genus Christensenella 215 179 16 26 2 2 9 7 4
genus Chromatium 2 206
genus Chromobacterium 9 86 1 1 4
genus Chromohalobacter 1 1
genus Chroococcidiopsis 1 1 1
genus Chroococcus 1 388 2
genus Chryseobacterium 40 73 2 1 1 6 4
genus Chryseolinea 28 4
genus Chryseomicrobium 18 2
genus Chthoniobacter 12 18
genus Chthonomonas 96 5 3
genus Citreitalea 1
genus Citricoccus 1 1
genus Citrifermentans 8 2
genus Citrobacter 15 171 55 17 7 2 4 9 3 4
genus Citromicrobium 3
genus Clavibacter 1 4
genus Cloacibacillus 122 76 106 1 1 1 1
genus Cloacibacterium 16 2 1 1 3
genus Cloacimonas 1
genus Clostridiisalibacter 6
genus Clostridioides 82 488 3 32 4 5 6 4
genus Clostridium 977 943 778 35 32 15 17 1 10 7 4
genus Cnuella 3
genus Cobetia 1
genus Cocleimonas 2
genus Coenonia 2
genus Cognaticolwellia Liu et al. 2020 1
genus Cohaesibacter 1 1
genus Cohnella 48 311 3 3 7 4
genus Coleofasciculus 1
genus Colidextribacter 1 23 8
genus Collimonas 31 5 1 4
genus Collinsella 849 762 770 32 21 9 14 6 7 4
genus Colwellia 28 1 4
genus Comamonas 35 75 22 1 8 1 3
genus Commensalibacter 2
genus Companilactobacillus 112 120 1 1 1 4
genus Conchiformibius 1 2
genus Conexibacter 8 6
genus Confluentimicrobium 1
genus Congregibacter 4
genus Contubernalis 119 5
genus Coprobacillus 477 919 154 5 25 5 3 2 7
genus Coprobacter 598 337 9 10 1 4
genus Coprococcus 983 942 2 31 32 15 17 2 10 7
genus Coprothermobacter 45 11 7
genus Coraliomargarita 67 275 1
genus Corallibacter 1
genus Corallococcus 4
genus Coriobacterium 14 84 2 1 3
genus Corticibacter 4
genus Corynebacterium 566 459 445 8 12 2 7 8 1 4
genus Couchioplanes 9 1
genus Coxiella 19 1
genus Crassaminicella 1
genus Craurococcus 2
genus Crenothrix 1
genus Criblamydia 43
genus Crinalium 1 1
genus Croceibacter 5 1
genus Croceibacterium 1
genus Croceicoccus 1
genus Cronobacter 76 83 2 1 4
genus Cruoricaptor 49 1
genus Cryobacterium 2 11 1
genus Cryomorpha 84
genus Cryptanaerobacter 1
genus Cryptobacterium 319 1 1 3 1
genus Cryptococcus 13
genus Cryptosporangium 1
genus Cryptosporidium 1
genus Cucumibacter 2
genus Culturomica 7
genus Cuneatibacter 9
genus Cupidesulfovibrio 13 3
genus Cupriavidus 52 8 1 1 1 4
genus Curtobacterium 7 1 1 1
genus Curvibacter 7 30 6 1 2
genus Cutibacterium 10 5 29 1 1 1
genus Cyanobacterium 30 149 1
genus Cyanobium 4 1 1 1
genus Cyanothece 1
genus Cyclobacterium 53 4
genus Cycloclasticus 20 9 1 1
genus Cyclonatronum 3
genus Cylindrospermum 1
genus Cystobacter 33 28 1
genus Cytobacillus 68 1 1 4
genus Cytophaga 55 2 1
genus Dactylococcopsis 3
genus Dactylosporangium 1 12
genus Dasania 21
genus Dechloromonas 9 89 1
genus Deefgea 6 1
genus Deferribacter 35 112 4 4
genus Deferrisoma 28 1
genus Defluviicoccus 8
genus Defluviimonas 3 1
genus Defluviitalea 190 2 3 2
genus Defluviitoga 3 1
genus Dehalobacter 187 3 1 4
genus Dehalobacterium 1 374 9 2 7 3 1
genus Dehalococcoides 42 1 1 1 1 1
genus Dehalogenimonas 157 74 4
genus Deinococcus 142 443 6 1 1 1 4 4
genus Delftia 7 19 64 3
genus Dellaglioa 83 11
genus Demequina 46 5 1
genus Dendrosporobacter 41
genus Denitratisoma 11 118 1
genus Denitrobacter 2
genus Denitrobacterium 1 6 1 1
genus Denitrovibrio 3
genus Dependoparvovirus 2
genus Dermabacter 59 24 53 1
genus Dermacoccus 1 5 1 1
genus Derxia 39
genus Desemzia 201 2
genus Desertibacter 5
genus Deserticella 8
genus Desmospora 5
genus Desulfacinum 2 41
genus Desulfallas 29 3 1
genus Desulfarculus 124 1
genus Desulfatibacillum 3 1 1
genus Desulfatiferula 17
genus Desulfatiglans 11
genus Desulfatirhabdium 1
genus Desulfatitalea 8
genus Desulfitibacter 85 3 1 2 1
genus Desulfitispora 33 1
genus Desulfitobacterium 95 173 1 1 3 4
genus Desulfobacca 23 1 1
genus Desulfobacter 14 71 1 2 3
genus Desulfobacterium 299 1 1 1
genus Desulfobacula 3
genus Desulfobaculum 12
genus Desulfobotulus 6
genus Desulfobulbus 68 5 1 1
genus Desulfocapsa 2 1 1
genus Desulfocarbo 131
genus Desulfocella 280 1 2 5
genus Desulfococcus 3 3 1 4
genus Desulfoconvexum 1
genus Desulfocurvibacter 1 1
genus Desulfocurvus 2
genus Desulfofaba 42 3
genus Desulfofarcimen 226 28 1 4
genus Desulfofrigus 45 89
genus Desulfofundulus 81 141 1
genus Desulfofustis 9
genus Desulfoglaeba 246
genus Desulfohalobium 3 3
genus Desulfohalophilus 1
genus Desulfohalotomaculum 680 89 1 1
genus Desulfohalovibrio 76 3
genus Desulfomicrobium 214 60 1 6 4
genus Desulfomonile 13 152 1 1
genus Desulfonatronobacter 4
genus Desulfonatronovibrio 7 138 2
genus Desulfonatronum 43 213 2
genus Desulfonauticus 25 62 7
genus Desulfonema 23 2
genus Desulfonispora 94
genus Desulfopila 1 1
genus Desulfoplanes 18
genus Desulforegula 68 2
genus Desulforhabdus 1
genus Desulfosalsimonas 2
genus Desulfosarcina 20 50 1
genus Desulfoscipio Watanabe et al. 2020 7 1 1
genus Desulfosoma 130 2
genus Desulfosporosinus 186 418 1 1 1 3 7 4
genus Desulfotalea 1 2
genus Desulfothermus 11
genus Desulfotignum 1
genus Desulfotomaculum 784 492 2 9 3 2 7 7 4
genus Desulfovibrio 857 769 381 20 9 6 10 6 9 7 4
genus Desulfovirga 25
genus Desulfurella 6 5 1
genus Desulfuribacillus 7 1
genus Desulfurispira 3
genus Desulfurispirillum 170 1 1
genus Desulfurispora 539 480 2 1 2
genus Desulfurivibrio 2 1
genus Desulfurobacterium 4 1
genus Desulfuromonas 52 46 2 1
genus Desulfuromusa 3 438 1 5
genus Dethiobacter 8 39 1 2 2 1
genus Dethiosulfatibacter 267 2
genus Dethiosulfovibrio 91 515 1 1 6
genus Devosia 60 311 1 4
genus Devriesea 1
genus Dialister 873 610 475 10 11 6 14 4 8 5 4
genus Diaphorobacter 5 5 1 1
genus Dichelobacter 1 1
genus Dichotomicrobium 13
genus Dickeya 38 20 1 1 4
genus Dictyoglomus 65 2 1
genus Dielma 536 307 9 15 1 6
genus Dientamoeba 1
genus Dietzia 125 45 1 1
genus Dinoroseobacter 1
genus Diplorickettsia 13
genus Dispar 1
genus Dissulfuribacter 10
genus Dokdonella 30 364 1 1 1
genus Dokdonia 21 4
genus Dolichospermum 1 611 7 1
genus Dolosicoccus 7 1
genus Dolosigranulum 173 1
genus Dongia 159 2
genus Dorea 976 936 779 35 33 17 18 12 9 7
genus Draconibacterium 31 1
genus Drancourtella 3 9
genus Duganella 3 1
genus Duncaniella 1 4
genus Duodenibacillus 7 1 1
genus Dyadobacter 64 253 1 4 4
genus Dyella 7 1 1
genus Dysgonomonas 635 769 10 4 3 2 6 7
genus Dysosmobacter 9 1
genus Echinicola 52 1 4
genus Ectobacillus 24 2
genus Ectothiorhodosinus 5
genus Ectothiorhodospira 42 169 1
genus Edaphobacter 105 1
genus Edwardsiella 28 61 1
genus Edwardsiella 36 1
genus Effusibacillus 171 5
genus Eggerthella 797 691 575 24 32 5 8 4 9 6 4
genus Eggerthia 345 1 1
genus Egibacter 1
genus Egicoccus 1
genus Ehrlichia 8 235 1 2 1
genus Eikenella 6 2 5 1 2 1
genus Eionea 1
genus Eisenbergiella 738 518 24 3 3 6 9 6
genus Eisenibacter 118
genus Ekhidna 1
genus Elioraea 3
genus Elizabethkingia 21 4 1 4
genus Elstera 3
genus Elusimicrobium 56 7 7 1 1
genus Emcibacter 103
genus Emergencia 2 1 9
genus Empedobacter 8 1
genus Emticicia 143 661 2 1 2 5
genus Endobacter 1
genus Endobugula 52
genus Endolissoclinum 1
genus Endomicrobium 1
genus Endozoicomonas 3 1
genus Enhydrobacter 18
genus Enorma 86 68 3 2 1
genus Ensifer 3 1 1
genus Enterobacter 54 387 208 9 8 2 15 5 7 4
genus Enterocloster 881 2 33 29 4 3 9 4
genus Enterococcus 167 749 137 27 28 3 9 4 4 4 4
genus Enterorhabdus 291 263 7 11 7 1
genus Enteroscipio 2
genus Enterovibrio 1
genus Entomomonas 1
genus Entomoplasma 18 5 2 4
genus Epibacterium 1
genus Epilithonimonas 3 4 1
genus Epulopiscium 59 3 1
genus Ercella 249
genus Ereboglobus 3
genus Eremococcus 24 21 1
genus Eremococcus 1 11
genus Erwinia 171 240 1 1 2 11 1 2 4
genus Erysipelatoclostridium 980 756 35 29 4 8 9 7 4
genus Erysipelothrix 595 781 3 5 4 7 3
genus Erythrobacter 18 76 1 1 1
genus Erythromicrobium 9
genus Escherichia 60 763 1 11 26 7 1 5 1 6 4
genus Ethanoligenens 787 443 4 9 4
genus Eubacterium 984 900 151 36 33 12 13 11 9 7 4
genus Eudoraea 52
genus Euryhalocaulis 8
genus Euzebya 35 501 1 1 1
genus Euzebyella 1
genus Evansella 1
genus Evtepia 10 3
genus Exiguobacterium 27 18 1 3 4
genus Exophiala 1
genus Extensimonas 1
genus Extibacter 6
genus Ezakiella 258 3 2 1
genus Fabibacter 6
genus Facklamia 734 88 50 2 1 5
genus Faecalibacterium 983 944 772 35 33 14 18 4 1 7 4
genus Faecalibaculum 1 1
genus Faecalicatena 575 21 1
genus Faecalicoccus 600 3 1 3 5
genus Faecalimonas 1
genus Faecalitalea 111 83 18 17 1 4
genus Falcatimonas 1 14 1
genus Falsiporphyromonas 238 2
genus Falsirhodobacter 1
genus Fangia 12
genus Fannyhessea 146 2
genus Fastidiosipila 78 75 1 1 3
genus Fenollaria 496 4 2 5
genus Fermentimonas 1 4
genus Ferrimicrobium 2 10 1
genus Ferrimonas 36 8 1
genus Ferrithrix 145
genus Ferrovibrio 2
genus Ferrovum 2
genus Ferruginibacter 55
genus Fervidicella 7
genus Fervidobacterium 11 1 4
genus Fibrella 1 3
genus Fibrobacter 205 81 85 2 1
genus Fictibacillus 32 1 4
genus Filifactor 333 270 18 1 1 3
genus Filimonas 4
genus Filomicrobium 1
genus Fimbriimonas 27 2 1
genus Finegoldia 715 473 443 5 3 2 4 7 1 3
genus Fischerella 1
genus Flagellimonas 1 1
genus Flammeovirga 24 203 1 1 4
genus Flaviaesturariibacter 1
genus Flavicella 4
genus Flaviflexus 21 1 3
genus Flavihumibacter 3
genus Flavilitoribacter 7
genus Flavisolibacter 1 15 1 1 1 4
genus Flavitalea 9
genus Flavivirga 1
genus Flavobacterium 38 39 394 1 7 4
genus Flavonifractor 956 768 31 32 5 1 9 7 4
genus Flectobacillus 79
genus Flexibacter 8 1 2
genus Flexispira Bryner 1987 1
genus Flexistipes 61 1
genus Flexithrix 11
genus Flintibacter 25 2 8
genus Fluoribacter 1
genus Fluviicola 17 3 1 1
genus Fluviimonas 380 1
genus Fluviispira 3
genus Fodinibius 3 2
genus Fodinicurvata 388 1 7
genus Fontibacter 30
genus Fonticella 110 2
genus Formosa 1 4
genus Fournierella 1 16 3 1
genus Francisella 58 36 2 2 1 4
genus Franconibacter 10
genus Frankia 1 1 4
genus Frateuria 3 1
genus Frederiksenia 2 1
genus Fretibacter 14
genus Fretibacterium 4 98 1
genus Friedmanniella 25 12 1 1
genus Frigoribacterium 1
genus Frischella 2 1 3
genus Frisingicoccus 7
genus Frondihabitans 1
genus Fructilactobacillus 69 46 1 1 1
genus Fructobacillus 30 51
genus Fuchsiella 9 1
genus Fucophilus 2
genus Fulvibacter 1
genus Fulvimarina 1
genus Fulvitalea 54
genus Fulvivirga 86 5
genus Furfurilactobacillus 32 388 1 1
genus Fuscovulum Suresh et al. 2019 1 3
genus Fusibacter 171 63 5 6
genus Fusicatenibacter 969 760 17 3 1 11
genus Fusobacterium 477 413 121 5 4 1 2 4 6 4
genus Gabonibacter 10 1 2
genus Gaetbulibacter 1
genus Gaiella 36 2
genus Galenea 37 2
genus Gallaecimonas 3
genus Gallibacterium 51 22 1 1 1 1
genus Gallicola 53 70 1
genus Gallionella 23 119 2 1
genus Garciella 12 2
genus Gardnerella 136 55 40 1 1 2 1
genus Garicola 2
genus Garritya 2
genus Gelria 2 211 2
genus Gemella 535 864 153 3 17 5 6 6 4
genus Geminicoccus 42 1
genus Geminisphaera 9
genus Geminocystis 1
genus Gemmata 12 7 1 1
genus Gemmatimonas 16 4 1
genus Gemmatirosa 7 1
genus Gemmiger 893 16 10 6 8
genus Gemmobacter 2 1 4
genus Geoalkalibacter 11 1
genus Geobacillus 50 304 7 11 1 1 1 3 1
genus Geobacter 46 57 1 1 4
genus Geodermatophilus 6 3 1 2
genus Geofilum 103
genus Geomicrobium 19
genus Geopsychrobacter 6
genus Georgenia 34 7
genus Georhizobium 1
genus Geosporobacter 2 4
genus Geothermobacter 2
genus Geothermomicrobium 2
genus Geothrix 357 437 2 2
genus Geovibrio 1 9 3
genus Gibbsiella 4
genus Giesbergeria 1 7
genus Gilliamella 1
genus Gillisia 23 565 1 1
genus Gilvimarinus 1
genus Gimesia 2
genus Glaciecola 59 135 3
genus Glaciimonas 2
genus Glaesserella 3 1 1
genus Gleimia 32 24 1
genus Globicatella 18 2 1
genus Gloeobacter 8 1 1
genus Gloeothece 1
genus Gloeotrichia 1
genus Glomeribacter 2 389 3
genus Gluconacetobacter 7 3 1
genus Gluconobacter 3 68 1 1
genus Glutamicibacter 52 85 1
genus Glycocaulis 1 1
genus Glycomyces 9 45 1
genus Gorbachella 1 1 1
genus Gordonia 64 27 1 1 4
genus Gordonibacter 535 458 24 24 1 1 7 1
genus Gottschalkia 148 4 3 4
genus Gracilibacillus 108 1
genus Gracilibacter 421 3 2 3 5
genus Gracilimonas 265 2 3
genus Gramella 2 46 1 6 4
genus Granulibacter 4
genus Granulicatella 135 434 319 12 2 3 5 5
genus Granulicella 13 55 1
genus Granulosicoccus 70 1
genus Gryllotalpicola 7 1
genus Gudongella 1 1
genus Guggenheimella 341 2 5
genus Gulbenkiania 4
genus Gullanella 2
genus Gulosibacter 4 33 29 1
genus Guyparkeria 1 10
genus Gynuella 35 1
genus Haematobacter 3
genus Haematospirillum 2
genus Haemophilus 739 715 528 21 15 5 17 4 4 6 4
genus Hafnia 14 2 1 1
genus Hahella 166 98 1 3
genus Halanaerobacter 3 7 4
genus Halanaerobaculum 6
genus Halanaerobium 11 171 1 1 2 4
genus Halarcobacter 9 1 2
genus Halarsenatibacter 72
genus Haliangium 22 71 3
genus Haliea 7
genus Halioglobus 1 1
genus Haliscomenobacter 58 3
genus Halobacillus 24 1 4
genus Halobacteriovorax 34 6 1 4
genus Halobacteroides 6 1
genus Halobaculum 1
genus Halocella 4 1 4
genus Halochromatium 170 52 2
genus Halodesulfovibrio 5
genus Haloferax 1
genus Haloferula 30 2
genus Haloglycomyces 1
genus Halolactibacillus 6
genus Halomicroarcula 1
genus Halomicronema 1 3
genus Halomonas 388 90 1 1 3 1 3 4
genus Halonatronum 5
genus Haloplasma 30 1 1
genus Halopolyspora 136 2
genus Halopseudomonas 7
genus Halorhodospira 78 22 1 2 1
genus Halospina 8
genus Halospirulina 1
genus Halotalea 1
genus Halothermothrix 144 2 4 1
genus Halothiobacillus 44 15 2
genus Haploplasma 21 40 1 2 2 3
genus Harryflintia 4
genus Hartmannibacter 1
genus Hathewaya 492 926 4 2 7
genus Hazenella 15
genus Helcococcus 146 67 20
genus Helicobacter 29 268 3 1 1 1 4
genus Heliimonas 6
genus Heliobacterium 3 1 1 3 3 1
genus Heliomicrobium 1 1 1
genus Heliomonas 1 1
genus Heliophilum 5 2
genus Heliorestis 9 319 3 5
genus Heliothrix 1
genus Hellea 9
genus Henriciella 394 4
genus Hepatoplasma 1
genus Hephaestia 2
genus Herbaspirillum 49 363 251 13 2 3 3 4
genus Herbinix 343 6 2 5 4
genus Herminiimonas 179 34 2 4
genus Herpetosiphon 3 1
genus Hespellia 946 499 15 1 9
genus Heyndrickxia 1 1
genus Hippea 2 1
genus Hirschia 1
genus Histophilus 19 1 1
genus Hoeflea 1
genus Holdemanella 554 503 2 17 2 5 6
genus Holdemania 828 797 565 23 26 4 9 10 7
genus Holophaga 10 2
genus Holospora 1
genus Holzapfelia 48
genus Homo 1
genus Hoppeia 1
genus Howardella 681 124 2 2 2
genus Hoyosella 26
genus Hugenholtzia 32 2
genus Humibacter 19
genus Hungateiclostridium 563 593 2 4 1 7 6 4
genus Hungatella 929 32 31 4 4 9 7
genus Hwangdonia 11
genus Hydrocarboniphaga 1 661 1
genus Hydrocoleum 9
genus Hydrogenibacillus 74 4 2 3
genus Hydrogenispora 464
genus Hydrogenoanaerobacterium 777 224 2
genus Hydrogenobacter 3 1 3
genus Hydrogenobaculum 1 7 2 3 1
genus Hydrogenophaga 16 20 1 1 1
genus Hydrogenophilus 212 399 3 1 1
genus Hydrogenothermus 21
genus Hydrogenovibrio 18 23 1
genus Hydrotalea 14
genus Hylemonella 1
genus Hymenobacter 38 566 1 1 4
genus Hyphomicrobium 17 97 1 4 4
genus Hyphomonas 10 50 3 2
genus Iamia 5
genus Ianmoorea 3
genus Ichthyobacterium 1
genus Ideonella 2
genus Idiomarina 8 39 1 1
genus Ignatzschineria 6 1
genus Ignavibacterium 43 31 1
genus Ignavigranum 82 2
genus Ihubacter 28 9
genus Ileibacterium 3
genus Ilumatobacter 74
genus Ilyobacter 4
genus Immundisolibacter 3
genus Imperialibacter 15
genus Imtechella 1 1
genus Indibacter 22
genus Indioceanicola 3
genus Inquilinus 11 6
genus Insolitispirillum 184 557 6
genus Intestinibacillus 8 7
genus Intestinibacter 793 770 19 24 3 8
genus Intestinibaculum Kim et al. 2019 1 4
genus Intestinimonas 928 721 34 28 5 1 9 4
genus Intrasporangium 2
genus Iodobacter 7 3
genus Ishikawaella 1
genus Isochromatium 5
genus Izimaplasma 1
genus Jahnia Reichenbach 2005 1
genus Janibacter 2 1
genus Jannaschia 1 2 1
genus Janthinobacterium 6 31 3 4
genus Jatrophihabitans 6 1
genus Jeotgalibaca 1 3
genus Jeotgalibacillus 6 1 1
genus Jeotgalicoccus 63 9 1 1
genus Jiangella 1 12 1 4
genus Jinshanibacter 3
genus Johnsonella 652 909 10 11 1 2 7
genus Jonesia 95 16
genus Jonquetella 95 10 1
genus Kaistella 1 3
genus Kaistia 35 10 1
genus Kallipyga 58 1 1
genus Kallotenue 13
genus Kandleria 161 2
genus Kangiella 27 1
genus Kastovskya 2
genus Keratinibaculum 8
genus Ketobacter 1
genus Ketogulonicigenium 3 1
genus Kiloniella 42 3 1
genus Kineococcus 5 3 1
genus Kineosporia 1 5
genus Kinetoplastibacterium 4
genus Kingella 4 5 2 1
genus Kistimonas 1
genus Kitasatospora 8 26 1 5 4
genus Klebsiella 68 269 144 7 15 5 12 11 9 5 4
genus Kluyvera 10 536 4 1 7
genus Knoellia 1
genus Kocuria 25 25 6 1 1 1 4
genus Kofleria 2
genus Komagataeibacter 28 1 3
genus Kordia 1 1
genus Kordiimonas 2
genus Koribacter 4 1
genus Kosakonia 255 26 4 3
genus Kosmotoga 1 10 1
genus Kozakia 1 3
genus Kribbella 282 52 5
genus Kroppenstedtia 3 1 1
genus Ktedonobacter 1
genus Kurthia 1 3
genus Kushneria 3 206 2 1
genus Kutzneria 1
genus Kyrpidia 97 1
genus Kytococcus 1 2 1
genus Labilibacter 4
genus Labilibaculum 1 4
genus Labilithrix 36
genus Labrenzia 1 1
genus Labrys 4 6
genus Laceyella 5 30 1
genus Lachnoanaerobaculum 957 12 3 2 6 4
genus Lachnobacterium 672 867 12 28 1 6 8 8 4
genus Lachnoclostridium 982 2 36 31 5 10 9 3 4
genus Lachnospira 978 944 713 35 33 7 18 9 10 7 4
genus Lachnotalea 3 3
genus Lacibacter 2 3
genus Lacibacterium 123
genus Lacihabitans 7
genus Lacimicrobium 1
genus Lacinutrix 1 4
genus Lacrimispora 302 1 32 18 2 1 4
genus Lacticaseibacillus 56 187 141 3 8 2 3 1 3 4
genus Lactiplantibacillus 8 115 65 13 1 3 1 4 2
genus Lactivibrio 2
genus Lactobacillus 984 884 813 36 27 12 18 11 10 7 4
genus Lactococcus 627 573 260 9 10 3 7 1 7 3 4
genus Lactonifactor 655 477 27 3 9 7
genus Lactovum 227
genus Lacunisphaera 3
genus Lagierella 1
genus Lamprocystis 2
genus Lancefieldella 72 58 4 2 1 2 1 1
genus Lapidilactobacillus 4
genus Laribacter 3 3
genus Larkinella 1
genus Larsenimonas 1
genus Lascolabacillus 1
genus Latilactobacillus 2 33 4 1 1 3
genus Lautropia 42 53 8 1 1
genus Lawsonella 1
genus Lawsonia 534 5 1 1 3
genus Lawsonibacter 9
genus Leadbetterella 14 3
genus Lebetimonas 20
genus Leclercia 1 1
genus Legionella 66 601 1 1 4 3 4
genus Leifsonia 1 1 1 1
genus Leisingera 1
genus Lelliottia 1 284 2 4
genus Leminorella 4 1
genus Lentibacillus 46 139 1
genus Lentilactobacillus 3 57 14 2 1 1 2
genus Lentisphaera 4
genus Lentzea 1 2 1
genus Leptofauchea 10
genus Leptolinea 92 2
genus Leptolyngbya 1 217 1 1 2 4
genus Leptonema 14 2
genus Leptospira 26 260 2 4
genus Leptospirillum 17 1
genus Leptothrix 7 136 2 1
genus Leptotrichia 61 39 29 2 4
genus Leucobacter 38 16 1 1
genus Leuconostoc 690 426 79 3 7 2 2 9 6 4
genus Leucothrix 5 11 1
genus Levilactobacillus 37 53 5 1 1 1
genus Levilinea 1
genus Levyella 351 2
genus Lewinella 8 45
genus Libanicoccus 1
genus Liberibacter 2 53 6 7 1
genus Lichenihabitans 1
genus Ligilactobacillus 126 114 65 6 1 2 1 4
genus Limibacillus 15
genus Limibacter 1
genus Limimaricola 2
genus Limimonas 3
genus Limisphaera 9 2
genus Limnobacter 37 680 1 1 2 1
genus Limnobaculum 1
genus Limnochorda 1 1
genus Limnohabitans 3 12 2
genus Limnoraphis 3
genus Limnospira 1
genus Limosa 1
genus Limosilactobacillus 280 128 75 2 6 2 2 1 4
genus Liquorilactobacillus 150 1
genus Lishizhenia 2
genus Listeria 217 197 1 1 1 4 1 4
genus Litoribacillus 56
genus Litoribacter 18
genus Litoribrevibacter 11
genus Litoricola 29 49 3
genus Litorilinea 8 2 2
genus Litorilituus 80 4
genus Loigolactobacillus 10 1 1
genus Loktanella 6 2
genus Longibaculum 3 1 3
genus Longicatena 4 3
genus Longilinea 3 4
genus Longimonas 55
genus Lonsdalea 5
genus Luminiphilus 48
genus Lunatimonas 2
genus Luteibacter 40 526 3 1
genus Luteibaculum 1
genus Luteimonas 18 16 1 1
genus Luteipulveratus 1
genus Luteitalea 1
genus Luteivirga 5
genus Luteococcus 9 1
genus Luteolibacter 25 400 2
genus Lutibacter 38 4
genus Lutibacterium 5
genus Lutibaculum 1
genus Lutispora 247 1 3 5
genus Lysinibacillus 17 124 5 1 5 2 1 4
genus Lysinimonas 1
genus Lysobacter 62 181 1 1 2 2 4
genus Macellibacteroides 4
genus