Bacteria reported by various 16s providers

Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

clade

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Bilateria 13 8 1 83
Eumetazoa 13 8 1 92

class

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Protostomia 13 8 1 81
Acidimicrobiia 5 198 51
Acidithiobacillia 23 1
Acidobacteria 128 325 77
Acidobacteria subdivision 23 47
Acidobacteria subdivision 6 1
Acidobacteriia 848 599 38 429
Aconoidasida 1
Actinopteri 1
Agaricomycetes 1
Alphaproteobacteria 478 570 34 425
Amphibia 1 3
Anaerolineae 12 103 200
Anthozoa 1 15
Aquificae 23 7
Arachnida 1
Archaeoglobea 1
Ardenticatenia 10 1
Armatimonadia 1
Arthoniomycetes 1
Aves 1
Babeliae 3
Bacilli 849 602 39 467
Bacteroidetes 851 602 39 469
Balneolia 320 7 35
Betaproteobacteria 806 599 39 462
Bivalvia 1
Blastocatellia 3 87 3
Brocadiae 9
Bryopsida 1
Caldilineae 1 167 150
Caldisericia 1 2
candidate division Termite Group 3 2
Cestoda 1
Chitinispirillia 7
Chitinophagia 9 467 203
Chlamydiia 75 46
Chlorobia 1 44 363
Chloroflexia 3 41 14 2
Chlorophyceae 1
Chromadorea 1
Chrysiogenetes 12 92
Chthonomonadetes 39 4
Clitellata 1
Clostridia 852 602 39 469
Coprothermobacteria 7 31 4
Coriobacteriia 838 600 39 427
Cytophagia 10 510 13 377
Dacrymycetes 1
Deferribacteres 1 59 123
Dehalococcoidia 1 124 66
Deinococci 11 129 13 299
Deltaproteobacteria 683 578 36 451
Diaporthales 1
Dictyoglomi 40 1
Dothideomycetes 1
Echinoidea 1
Ellioviricetes 1
Elusimicrobia 7 58 20 10
Endomicrobia 1
Enopla 1
Epsilonproteobacteria 296 298 10 243
Erysipelotrichia 833 601 39 461
Eurotiomycetes 1
Fibrobacteria 203 124 47
Fimbriimonadia 18 2
Flavobacteriia 501 368 13 380
Florideophyceae 10
Fusobacteria 171 342 8 245
Gammaproteobacteria 781 601 39 464
Gastropoda 1 32
Gemmatimonadetes 2 35 16 5
Gloeobacteria 7 1
Halobacteria 1
Hemiascomycetes 1 2
Heterobasidiomycetes 1 13
Hexanauplia 1
Holophagae 275 189
Hydrogenophilalia 6 134 173
Ignavibacteria 2 409 16 33
Insecta 13 8 1 56
Insthoviricetes 1
Ktedonobacteria 7 31
Lecanoromycetes 1
Lentisphaeria 301 190 8 7
Liliopsida 1
Limnochordia 1 1
Malasseziomycetes 2
Mammalia 1
Mandibulata 13 8 1 56
Merostomata 1
Methanobacteria 232 156 19 144
Methanomicrobia 20 2 2
Methylacidiphilae 8
Microbotryomycetes 1
Mollicutes 181 523 28 422
Negativicutes 853 601 37 426
Nitriliruptoria 24 213
Nitrososphaeria 1 1
Nitrospinia 2
Nitrospira 2 29 64
Oligoflexia 2 49 13
Oligosphaeria 1 22
Opitutae 108 232 1 258
Pedosphaera 3
Pentapetalae 21 12 2 128
Pezizomycetes 1
Phaeophyceae 1
Phycisphaerae 2 4
Pilidiophora 1
Planctomycetia 3 61 12
Polychaeta 1
Polyplacophora 1
Polypodiopsida 1
Rhabditophora 1
Rhodothermia 6
Rhynchonellata 1
Rubrobacteria 2 52 6
Saprospiria 98 27
Solibacteres 1 7
Spartobacteria 33 15
Sphingobacteriia 22 363 28 435
Spirochaetia 28 87 200
Synergistia 252 234 1 310
Taphrinomycetes 1
Thermococci 1 1
Thermodesulfobacteria 18 54
Thermoleophilia 2 52 7
Thermolithobacteria 33
Thermomicrobia 1 7 1
Thermoplasmata 46 22
Thermoprotei 1 3
Thermotogae 14 30
Tissierellia 558 578 17 126
Trematoda 1
unclassified alpha proteobacteria 3 3
unclassified epsilon proteobacteria 6 3
Ustilaginomycetes 1
Verrucomicrobiae 520 543 28 393

cohort

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zetaproteobacteria 1 17 1
Endopterygota 1 3
Euteleosteomorpha 1
hemipteroid assemblage 13 4 48
Orthopteroidea 8 1 8

family

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Otomorpha 1
Acanthopleuribacteraceae 33
Acaryochloridaceae 3
Acetobacteraceae 7 177 1 140
Acholeplasmataceae 18 389 17 399
Acidaminococcaceae 595 549 23 388
Acidiferrobacteraceae 9 4
Acidimicrobiaceae 192 51
Acidithiobacillaceae 23 1
Acidobacteriaceae 99 104 77
Acidothermaceae 31 1
Actinomycetaceae 689 537 27 370
Actinopolysporaceae 96 104
Adenoviridae 1
Adoxaceae 1
Aerococcaceae 94 491 202
Aeromonadaceae 11 139 5 119
Agathiphagidae 1
Akkermansiaceae 517 531 28 348
Alcaligenaceae 12 113 10 421
Alcanivoracaceae 14 53
Alcidae 1
Algiphilaceae 16
Alicyclobacillaceae 204 8 6
Alteromonadaceae 277 152
Amanitaceae 1
Amaryllidaceae 1
Ambystomatidae 1
Ammodytidae 1
Amoebophilaceae 1 361
Anaerolineaceae 10 102 71
Anaeromyxobacteraceae 355 2
Anaeroplasmataceae 128 235 3 36
anamorphic Clavicipitaceae 1
anamorphic Mycosphaerellaceae 1
anamorphic Ustilaginaceae 1
Anaplasmataceae 22 128
Aphanizomenonaceae 1 277
Aphanothecaceae 3 1
Apiaceae 1
Aplysiidae 1
Aquificaceae 6 6
Araceae 1
Archaeoglobaceae 1
Archangiaceae 43 10
Ardenticatenaceae 10 1
Armatimonadaceae 1
Arthoniaceae 1
Ascarididae 1
Aspergillaceae 1
Asteraceae 1
Atopobiaceae 185 377 12 154
Aurantimonadaceae 1 3 6
Azonexaceae 9 44
Babeliaceae 3
Bacillaceae 256 457 34 403
Bacillales Family X. Incertae Sedis 1 288 422
Bacillidae 5 1 8
bacterial virus 2
Bacteriovoracaceae 2 23 7
Bacteroidaceae 833 601 38 465
Baicaliidae 1
Balneatrichaceae 7
Balneolaceae 316 1 37
bandicoots 1
bark crevice scale insects 13 2
Barnesiellaceae 544 533 13 29
Bartonellaceae 3 23
Bathydraconidae 1
Bdellovibrionaceae 1 4
Beijerinckiaceae 1 8 18
Bernardetiaceae 66 1
Beutenbergiaceae 1
Bifidobacteriaceae 667 595 28 449
Bionectriaceae 1
Blastocatellaceae 3 15
Blastocystidae 2
Blattabacteriaceae 4
Bogoriellaceae 22 6
Borreliaceae 3 13
Bovidae 1
Brachycladiidae 1
Brachyspiraceae 14 24
Braconidae 1
Bradymonadaceae 1
Bradyrhizobiaceae 17 36 21
Brassicaceae 1
Brevibacteriaceae 68 71 37
Brevinemataceae 3
Brucellaceae 29 29 4 38
Bryobacteraceae 8
Budviciaceae 172 5
Burkholderiaceae 41 174 18 369
Burseraceae 1
Cabombaceae 1
Caedimonadaceae 1
Calanidae 1
Caldicoprobacteraceae 254 10
Caldilineaceae 1 165 161
Caldisericaceae 1 1
Calditrichaceae 1 97
Caliciviridae 1
Campanulaceae 1
Campylobacteraceae 295 249 7 184
Candidatus Brocadiaceae 9
Candidatus Desulfofervidaceae 1
Candidatus Midichloriaceae 1 1
Candidatus Nanopelagicaceae 1 3
Candidatus Paracaedibacteraceae 1
Carabidae 1
Cardiobacteriaceae 10 93 10
Carnobacteriaceae 369 308 5 285
Caryophyllaceae 1
Catabacteriaceae 106 109 1 3
Catalimonadaceae 31
Catenulisporaceae 2 4
Caulobacteraceae 17 75 198
Cebidae 1
Celerinatantimonadaceae 6
Cellulomonadaceae 43 28
Cellvibrionaceae 38 6
Centrarchidae 1
Cercopithecidae 1
Cervidae 1
Chamaesiphonaceae 4 3
Chaoboridae 1
Chelatococcaceae 2 2 1
Chelidae 1
Chenopodiaceae 1
Chitinispirillaceae 7
Chitinivibrionaceae 2
Chitinophagaceae 9 467 219
Chlamydiaceae 1 2
Chlamydomonadaceae 1
Chlorobiaceae 44 359
Chlorococcaceae 1
Chloroflexaceae 2 1
Chlorogloeopsidaceae 8
Chordaceae 1
Chordariaceae 1
Christensenellaceae 136 94 25 31
Chromatiaceae 5 304 1 358
Chromobacteriaceae 69 46
Chroococcaceae 1 158
Chroococcidiopsidaceae 2 1
Chrysiogenaceae 12 98
Chrysomelidae 1
Chrysopidae 1
Chthoniobacteraceae 4 15
Chthonomonadaceae 39 4
Cichlidae 1
Clostridiaceae 837 601 39 459
Clostridiales Family XI. Incertae Sedis 229
Clostridiales Family XII. Incertae Sedis 18 322 117
Clostridiales Family XIII. Incertae Sedis 703 552 33 349
Clostridiales Family XVI. Incertae Sedis 19 251
Clostridiales Family XVII. Incertae Sedis 42 25
Clostridiales incertae sedis 742 562 33 378
Coccidae 39
Cochlospermaceae 1
Coelosphaeriaceae 9
Cohaesibacteraceae 1 1
Colchicaceae 1
Coleofasciculaceae 4
Colwelliaceae 107 4
Comamonadaceae 130 114 3 374
Competibacteraceae 99
Conexibacteraceae 1 6 2
Coprothermobacteraceae 7 31 4
Corbulidae 1
Coriobacteriaceae 824 538 36 452
Cortinariaceae 1
Corynebacteriaceae 496 351 10 233
Cottidae 1
Coxiellaceae 2 27 16
Criblamydiaceae 29
Cricetidae 1
Crocinitomicaceae 26 3 1
crown conchs 1
Cryomorphaceae 1 61 1
Cryptococcaceae 13
Cryptomonadaceae 1
Cryptosporangiaceae 1
Culicidae 1
Cuniculitremaceae 1
Curculionidae 1
Cyanobacteriaceae 25 65
Cyanothecaceae 1
Cyclobacteriaceae 161 4
Cyprinidae 1
Cytophagaceae 6 428 4 390
Dacrymycetaceae 1
Dactylopteridae 1
Dasypodidae 1
Deferribacteraceae 1 59 135
Defluviitaleaceae 20 144 3
Dehalococcoidaceae 25 59
Deinococcaceae 10 63 1 216
Delphinidae 1
Demequinaceae 31 3
Dendrocolaptidae 1
Dermabacteraceae 70 47 71
Dermacoccaceae 7 19 5
Dermatophilaceae 1 5 1
Dermocarpellaceae 1
Desulfarculaceae 149 1
Desulfobacteraceae 2 374 2 97
Desulfobulbaceae 59 1 5
Desulfohalobiaceae 30 117
Desulfomicrobiaceae 145 34
Desulfonatronaceae 24 131
Desulfovibrionaceae 681 545 34 436
Desulfurellaceae 5 6
Desulfurobacteriaceae 5 1
Desulfurococcaceae 1
Desulfuromonadaceae 61 225
Diapheromeridae 2
Dictyoglomaceae 40 1
Dictyosteliaceae 1
Dientamoebidae Grasse, 1953 1
Dietziaceae 4 77 21
Dipsadidae 1
Drosophilidae 1
Dunaliellaceae 1
Dysgonamonadaceae 49 391 4 330
Echinidae 1
Echinometridae 1
Ectothiorhodospiraceae 1 133 299
Edwardsiidae 15
Eggerthellaceae 819 585 38 417
Egibacteraceae 1
Egicoccaceae 1
Elassomatidae 1
Elusimicrobiaceae 7 38 8
Emcibacteraceae 67
Emplectonematidae 1
Enchytraeidae 1
Endomicrobiaceae 1
Endozoicomonadaceae 1 1
Enterobacteriaceae 637 390 35 436
Enterococcaceae 158 159 30 412
Entomoplasmataceae 41 206
Eremolepidaceae 1
Eremotheciaceae 2
Ericaceae 1
Erinaceidae 1
Erwiniaceae 188 162 4 121
Erysipelotrichaceae 833 601 39 458
Erythrobacteraceae 3 21 55
Estrildidae 1
Eubacteriaceae 323 601 39 454
Euglenaceae 1
Euphorbiaceae 1
Euzebyaceae 18 208
Fabaceae 12 2 128
Fastidiosibacteraceae 18
Faucheaceae 10
Ferrimonadaceae 32 5
Ferrovaceae 2
Fervidobacteriaceae 12
Fibrobacteraceae 152 118 47
Fimbriimonadaceae 18 2
Flammeovirgaceae 1 225 109
Flavobacteriaceae 497 328 3 376
Fortieaceae 6
Francisellaceae 2 53 24
Frankiaceae 3 4
Fusobacteriaceae 142 294 8 219
Gadidae 1
Gaiellaceae 2 25
Galagidae 1
Gallionellaceae 22 51
Geminicoccaceae 2 21
Gemmataceae 1 8 6
Gemmatimonadaceae 1 18 3
Gentianaceae 1
Geobacteraceae 25 25
Geodermatophilaceae 3 72 9
Geomyidae 1
Glareolidae 1
Gloeobacteraceae 7 1
Glossiphoniidae 1
Glyceridae 1
Glycomycetaceae 81 32
Gnetaceae 1
Gobiidae 1
Gomontiellaceae 50 1
Gomphaceae 1
Gomphosphaeriaceae 11
Gordoniaceae 4 47 13
Gottschalkiaceae 75 4
Gracilibacteraceae 8 263 4
Granulosicoccaceae 40 1
Haematopodidae 1
Haemodoraceae 1
Hafniaceae 14 31 2 21
Hahellaceae 106 49
Halanaerobiaceae 1 117 74
Halieaceae 1 46 1
Haliscomenobacteraceae 54 3
Halobacteriaceae 1
Halobacteriovoraceae 26 7
Halobacteroidaceae 191 29
Haloferacaceae 1
Halomonadaceae 1 280 2 158
Haloplasmataceae 1 12
Halothiobacillaceae 43 4
Hapalosiphonaceae 1
Harpacticidae 1
Helicobacteraceae 4 25 136
Heliobacteriaceae 103 4 198
Herpesviridae 1
Herpetosiphonaceae 4 1
Heteroleibleiniaceae 7
Holophagaceae 248 189
Holosporaceae 5
Hungateiclostridiaceae 153 598 38 395
Hyacinthaceae 1
Hydrocharitaceae 1
Hydrogenophilaceae 5 134 182
Hydrogenothermaceae 10 1
Hyellaceae 1
Hymenobacteraceae 4 106 274
Hyphomicrobiaceae 4 80 210
Hyphomonadaceae 1 310 37
Hypoxidaceae 1
Iamiaceae 3 14
Ichneumonidae 1
Ichthyobacteriaceae 1
Ictaluridae 1
Idiomarinaceae 19 21
Ignavibacteriaceae 1 27 30
Ilumatobacteraceae 48
Immundisolibacteraceae 3
Intrasporangiaceae 3 29 23
Ischnochitonidae 1
Isosphaeraceae 2 5 6
Ixodidae 1
Jiangellaceae 3 10
Jonesiaceae 49 8
Kallotenuaceae 10
Kangiellaceae 23 1
Kiloniellaceae 30 3 102
Kineosporiaceae 1 28 9
Kofleriaceae 1 20 33
Kordiimonadaceae 69
Kosmotogaceae 1 11
Ktedobacteraceae 1
Labilitrichaceae 37
Lachnospiraceae 848 601 39 467
Lactobacillaceae 823 586 30 423
Lampyridae 1
Lanariaceae 1
Laqueidae 1
Lecanoraceae 1
Lecythidaceae 1
Legionellaceae 1 32 267
Lentisphaeraceae 4
Leptolyngbyaceae 2 2 95
Leptospiraceae 23 153
Leptotrichiaceae 53 104 64
Leuconostocaceae 112 548 10 331
Lewinellaceae 7 23
Limnochordaceae 1 1
Limulidae 1
Listeriaceae 1 147 301
Litoricolaceae 26 14
Lonchitidaceae 1
Lorisidae 1
lotus family 1
Lucinidae 1
Macropodidae 1
Magnetococcaceae 9 1
Malasseziaceae 2
Marinifilaceae 147 4
Marinilabiliaceae 1 329 8 1
Mariprofundaceae 1 17 1
mealybugs 3 11
Melioribacteraceae 402 16 4
Merismopediaceae 3
Meruliaceae 1
Mesoaciditogaceae 4
Methanobacteriaceae 232 151 5 139
Methanocorpusculaceae 1 1 2
Methanomassiliicoccaceae 41 22
Methanomethylophilaceae 23
Methanoregulaceae 1
Methanosarcinaceae 1
Methylacidiphilaceae 8
Methylobacteriaceae 9 41 29
Methylococcaceae 1 99 6
Methylocystaceae 1 11 10
Methylophilaceae 155 195
Methylothermaceae 24
Microbacteriaceae 66 333 168
Microbulbiferaceae 7
Micrococcaceae 178 309 27 192
Microcoleaceae 1 179 83
Microcystaceae 1 3
Micromonosporaceae 2 133 144
Micropepsaceae 13
Microscillaceae 69 1
Microthrixaceae 1
mitosporic Nectriaceae 1
mitosporic Venturiaceae 1
Mniaceae 1
moles, shrew-moles, and desmans 1
Monimiaceae 1
Mooreiaceae 4
Moraceae 1
Moraxellaceae 39 276 9 223
Morganellaceae 20 293 18 77
Moritellaceae 1 1
Mrakiaceae 1
Muribaculaceae 4
Mustelidae 1
Mycobacteriaceae 76 48 99
Mycoplasmataceae 17 408 6 354
Mytilidae 1
Myxococcaceae 4 4
Mzabimycetaceae 74
Nakamurellaceae 2 4
Nannocystaceae 14 23
Natranaerobiaceae 21 1
Nautiliaceae 15 4
Neisseriaceae 89 127 12 135
Nereididae 1
nightshade family 13 1
Nitriliruptoraceae 6 3
Nitrosomonadaceae 8 182 5 8
Nitrosopumilaceae 1
Nitrososphaeraceae 1 1
Nitrospinaceae 2
Nitrospiraceae 2 29 64
Nocardiaceae 24 7 51
Nocardioidaceae 4 214 73
Nocardiopsaceae 183 6
noctuid moths 1
Nostocaceae 2 2 368
Nothobranchiidae 1
Nototheniidae 1
Numididae 1
Nymphalidae 1
Oceanospirillaceae 166 103
Odontophoridae 1
Odoribacteraceae 651 557 35 428
Oleiphilaceae 3
Oligosphaeraceae 22
Onagraceae 1
Ophiostomataceae 1
Opitutaceae 1 34 6
Orbaceae 4 4
Orchidaceae 1
Orthomyxoviridae 1
Oscillatoriaceae 58 206
Oscillospiraceae 789 593 38 25
Oxalobacteraceae 277 282 26 277
Paenibacillaceae 3 506 32 350
Paludibacteraceae 1 72 3 8
Papilionidae 1
Papillomaviridae 1
Parachlamydiaceae 3 2
Paridae 1
Parvularculaceae 9 1
Pasteurellaceae 594 494 31 373
Pasteuriaceae 16
Patulibacteraceae 2 1 1
Pectobacteriaceae 3 238 1 28
Pelagibacteraceae 4 1
Peptococcaceae 554 555 26 429
Peptoniphilaceae 551 560 9 396
Peptostreptococcaceae 844 600 33 421
Peribunyaviridae 1
Persicobacteraceae 51 5
Petromyzontidae 1
Petrotogaceae 5 10
Pezizaceae 1
Phaffomycetaceae 1
Phasianidae 1
Phycisphaeraceae 2 1
Phyllobacteriaceae 40 26 12
Picornaviridae 1
Piscirickettsiaceae 2 183 73
Pitheciidae 1
Planctomycetaceae 2 54 6
Planoceridae 1
Planococcaceae 43 500 24 190
Plasmodiidae 1
Platanaceae 1
Pleosporaceae 1
Pleuronectidae 1
Poaceae 1
Polyangiaceae 2 3 24
Polygonaceae 1
Porphyromonadaceae 569 594 38 448
Porticoccaceae 1
Poxviridae 1
Prevotellaceae 622 601 24 440
Prochloraceae 2 5
Prochlorococcaceae 1
Prochlorotrichaceae 3 3
Prolixibacteraceae 82 1
Promicromonosporaceae 22 7
Propionibacteriaceae 144 245 15 30
Prorhynchidae 1
Proteidae 3
Proteinivoraceae 273 309
Psathyrellaceae 1
Pseudanabaenaceae 2 129
Pseudoalteromonadaceae 25 15
Pseudomonadaceae 70 237 11 104
Pseudonocardiaceae 1 161 142
Psychromonadaceae 18 10
Psyllidae 1
Pteromalidae 1
Puniceicoccaceae 7 219 255
Pyrenomonadaceae 1
Pyrodictiaceae 1
Pythonidae 1
Pyxicephalidae 1
Rallidae 1
Ranunculaceae 1
Rarobacteraceae 39
Retroviridae 1
Rhabdochlamydiaceae 41
Rhizobiaceae 18 54 15 117
Rhodanobacteraceae 1 117 265
Rhodobacteraceae 12 155 4 105
Rhodobiaceae 3 6 4
Rhodocyclaceae 76 218 261
Rhodospirillaceae 398 463 26 356
Rhodothalassiaceae 11 4
Rhodothermaceae 86 6 388
Rickettsiaceae 148 254
Rikenellaceae 774 594 38 51
Rivulariaceae 60 219
Rosaceae 1
Roseiarcaceae 3
Roseiflexaceae 1 9 1
rove beetles 3
Rubiaceae 1
Rubricoccaceae 5
Rubritaleaceae 100 125
Rubrobacteraceae 1 30 6
Ruminococcaceae 839 601 39 467
Saccharospirillaceae 216 11
Salicaceae 1
Salinibacteraceae 1
Salinisphaeraceae 13 1
Salinivirgaceae 1
Sandaracinaceae 6 1
Sanguibacteraceae 2 4
Sapindaceae 1
Saprospiraceae 34 25
Sarcoscyphaceae 1
Schleiferiaceae 8
Scincidae 1
Sciuridae 1
Scrophulariaceae 1
Scytonemataceae 2 4
Sedimentisphaeraceae 3
Segniliparaceae 20 1
Selenomonadaceae 117 358 14 386
Shewanellaceae 86 258
Simkaniaceae 7 1
Simmondsiaceae 1
Sinobacteraceae 3 69 304
Sironidae 1
Sneathiellaceae 4
Solibacteraceae 1 1
Solirubrobacteraceae 1 11 4
Soricidae 1
Sphaerobacteraceae 6
Spheniscidae 1
Sphingobacteriaceae 8 363 26 431
Sphingomonadaceae 29 318 14 118
Spirillaceae 1 14
Spirochaetaceae 1 53 107
Spiroplasmataceae 228 4
Spirulinaceae 6
Spongiibacteraceae 119 1
Sporichthyaceae 7 1
Sporidiobolaceae 1
Sporolactobacillaceae 80 110
Sporomusaceae 37 382 291
Staphylococcaceae 235 187 3 348
Stereaceae 1
Sternoptychidae 1
Sterolibacteriaceae 12 49 55
Stichodactylidae 1
Stomiidae 1
Streptococcaceae 837 599 39 455
Streptomycetaceae 120 2 111
Streptosporangiaceae 94 160
Succinivibrionaceae 16 156 106
Sulfolobaceae 2
Sutterellaceae 753 594 39 418
Symbiobacteriaceae 154 249
Synechococcaceae 1 7 129
Synergistaceae 252 234 1 310
Syntrophaceae 40 81
Syntrophobacteraceae 228 169
Syntrophomonadaceae 12 262 352
Syntrophorhabdaceae 1 17
Taeniidae 1
Tannerellaceae 765 593 37 427
Taphrinaceae 1
Temperatibacteraceae 1
Tenrecidae 1
Tephritidae 1
Termitidae 1
Tetranychidae 1
Theaceae 1
Thermaceae 1 51 202
Thermoactinomycetaceae 1 296 237
Thermoanaerobacteraceae 229 175 374
Thermoanaerobacterales Family III. Incertae Sedis 89 1 408
Thermoanaerobacterales Family IV. Incertae Sedis 14
Thermoanaerobaculaceae 47
Thermococcaceae 1 1
Thermodesulfobacteriaceae 18 54
Thermodesulfobiaceae 16 39 6 5
Thermogemmatisporaceae 5 31
Thermoleophilaceae 24
Thermolithobacteraceae 33
Thermomicrobiaceae 1
Thermomonosporaceae 44 117
Thermonemataceae 14
Thermoproteaceae 1
Thermosporotrichaceae 2
Thermotogaceae 1 32
Thermotomaculaceae 7
Thioalkalibacteraceae 1 2
Thioalkalispiraceae 1 39 3
Thiobacillaceae 5 27 56
Thiofilaceae 2
Thiolinaceae 2
Thioprofundaceae 5
Thiotrichaceae 1 59 286
Thorselliaceae 38
Thraupidae 1
Tischeriidae 1
Tissierellaceae 1 179 17
Togaviridae 1
Trichechidae 1
Trichocoleaceae Mai et Johansen (2018) nom. illegit. 2
Trionychidae 1
Trueperaceae 1 11
Trypanosomatidae 1
Tsukamurellaceae 1 3 31
unclassified Enterobacterales 1 10
unclassified Rhodospirillales 6 5
Veillonellaceae 806 595 35 455
Verrucomicrobia subdivision 3 5 3
Verrucomicrobiaceae 238 95 362
Vesicomyidae 1
Vespidae 1
Vibrionaceae 1 65 41
Vicinamibacteraceae 1
Victivallaceae 301 185 8 5
Viviparidae 32
Waddliaceae 3
Wenzhouxiangellaceae 21 1
Woeseiaceae 1
Xanthobacteraceae 2 13 12
Xanthomonadaceae 34 171 351
Yersiniaceae 27 88 7 292
Ziphiidae 1

genus

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zoogloeaceae 2 103 1 104
16SrXII (Stolbur group) 3
Abiotrophia 19 54 21
Absiella 245 272
Acanthopleuribacter 33
Acaryochloris 3
Acer 1
Acetanaerobacterium 130 305 1
Acetatifactor 2 540 1
Acetitomaculum 148 413 1
Acetivibrio 34 478 27
Acetoanaerobium 331 1
Acetobacter 15 6
Acetobacterium 247 413
Acetobacteroides 157
Acetohalobium 1 24
Acetomicrobium 23 7
Acetonema 143
Acholeplasma 7 388 1 304
Achromatium 5
Achromobacter 1 1 9 33
Acidaminobacter 153 106
Acidaminococcus 109 301 4 328
Acidianus 1
Acidibacter 27
Acidicaldus 1
Acidicapsa 42
Acidiferrobacter 5 3
Acidihalobacter 1
Acidimicrobium 45
Acidiphilium 1 1 19
Acidipropionibacterium 2 4
Acidisphaera 1
Aciditerrimonas 84
Acidithiobacillus 23 1
Acidobacterium 4
Acidocella 1
Acidothermus 31 1
Acidovorax 8 18 31
Acinetobacter 32 148 8 87
Acizzia 1
Acrocarpospora 3
Actimicrobium 2
Actinoallomurus 1
Actinoalloteichus 4
Actinobacillus 105 139 8 252
Actinobaculum 20 6 34
Actinocatenispora 55 119
Actinocorallia 4 3
Actinokineospora 3
Actinomadura 22 24
Actinomyces 633 483 11 349
Actinomycetospora 2 2
Actinoplanes 65 10
Actinopolymorpha 1 33
Actinopolyspora 93 104
Actinosynnema 1
Actinotignum 32 47 7
Adenophora 1
Adhaeribacter 14
Adlercreutzia 563 3 326
Advenella 6 3
Aequorivita 7 2 2
Aeribacillus 25 1
Aeriscardovia 90
Aerococcus 19 146 16
Aeromicrobium 2 3 6
Aeromonas 11 94 5 5
Aerosphaera 53
Aestuariispira 251 2
Afipia 1 3
Agaribacter 192
Agarilytica 1
Agarivorans 7 1
Agathiphaga 1
Agathobacter 1
Agathobaculum 1 569 9 11
Aggregatibacter 190 106 2 133
Agmenellum 1
Agreia 2
Agrobacterium 1 14
Agrococcus 3 1 10
Agromyces 42 86
Ahniella 1
Akkermansia 515 531 28 377
Akodon 1
Albidovulum 4 1
Albimonas 2
Alcaligenes 2 7 3
Alcalilimnicola 1
Alcanivorax 6 53
Algibacter 3 1
Algicola 23
Algimonas 8
Algiphilus 16
Algivirga 1
Algorimarina 1
Algoriphagus 70 3
Alicycliphilus 1 1 6
Alicyclobacillus 62 4 5
Aliiarcobacter 1
Aliidiomarina 13
Aliifodinibius 132
Aliihoeflea 1
Aliivibrio 1
Alishewanella 41 78
Alistipes 774 594 35 37
Alkalibacillus 3 27
Alkalibacter 54
Alkalibacterium 5 1 160
Alkalibaculum 116
Alkaliflexus 24 1
Alkalimarinus 7
Alkaliphilus 172 4 419
Alkalispirillum 1
Alkalispirochaeta 1
Alkalitalea 1
Alkanibacter 1
Alkanindiges 1 3
Allisonella 76 108 4
Allium 1
Alloactinosynnema 4
Allobaculum 9 84 46
Allocatelliglobosispora 1
Allochromatium 25
Allofrancisella 5 1
Allofustis 2 5
Allohahella 46 41
Alloiococcus 3 45 3
Allokutzneria 1 1
Alloprevotella 95 267 2 5
Alloscardovia 27 72 30
Alocasia 1
Alphainfluenzavirus 1
Alphavirus 1
Alsobacter 2
Altererythrobacter 3 7 4
Alteribacillus 1
Alternaria 1
Alterococcus 14
Alteromonas 14 4
Altibacter 1
Alysiella 2 4
Amanita 1
Amaricoccus 1 1 16
Amblyomma 1
Ambystoma 1
Ameyamaea 3
Aminicella 304
Aminiphilus 1 46
Aminipila 4
Aminivibrio 25
Aminobacter 1 5
Aminobacterium 8 15
Aminomonas 29 4
Ammonifex 6 137
Ammoniphilus 12 17
Amnibacterium 1
Amphibacillus 17 4
Amphritea 2 13
Amycolatopsis 5 10
Amylibacter 3
Anabaenopsis 1
Anaerobacillus 25 106
Anaerobacter 65
Anaerobacterium 49 19 4
Anaerobiospirillum 13
Anaerobium 174 20
Anaerobranca 264 335
Anaerobutyricum 1 565 33 15
Anaerocella 88
Anaerococcus 407 342 6 189
Anaerocolumna 485 8
Anaerofilum 259 283 8 414
Anaerofustis 212 349 86
Anaeroglobus 22 325
Anaerolinea 4 19 28
Anaeromassilibacillus 10
Anaeromusa 7 64
Anaeromyxobacter 355 2
Anaerophaga 5
Anaeroplasma 49 106 1 34
Anaerorhabdus 12
Anaerosalibacter 130
Anaerosinus 37 10
Anaerosphaera 61
Anaerospora 98 1
Anaerosporobacter 587 336 6
Anaerostipes 822 601 39 414
Anaerotaenia 3
Anaerotignum 557 22 5
Anaerotruncus 769 507 31 421
Anaerovibrio 9 5 1 379
Anaerovorax 285 24 14
Anaplasma 7 1
Anderseniella 4
Andreprevotia 1
Andropogon 1
Aneurinibacillus 1 31 4
Angelakisella 23
Annandia 2
Anopheles 1
Anoxybacillus 4 17 25
Anoxybacter 4
Anoxynatronum 370
Antarctobacter 1
Anthracocystis 1
aphid P-endosymbionts 1 1 4
Apibacter 1
Aplysia 1
Aquabacterium 5 20 2
Aquamicrobium 8
Aquaspirillum 12
Aquibacter 1 6
Aquicella 6
Aquiflexum 7 1
Aquihabitans 10
Aquimarina 7 7
Aquimonas 11 2
Aquincola 1
Aquipuribacter 1 3
Aquisalimonas 28
Aquisphaera 2
Aquitalea 3 6
Arabia 1 1
Arachidicoccus 3
Aramigus 1
Arcanobacterium 34 22 1 17
Archaeoglobus 1
Archangium 4 1
Arcicella 62
Arcobacter 2 9 27
Arcticibacterium 1
Arctostaphylos 1
Ardenticatena 10
Arenibacter 1 5
Arenimonas 23 1
Argyropelecus 1
Arhodomonas 9
Aridibacter 15
Armatimonas 1
Aromatoleum 1
Arsenicicoccus 1 1
Arsenophonus 25 11
Arthothelium 1
Arthrobacter 15 3 1 77
Arthronema 2
Arthrospira 1 1 7
Artocarpus 1
Arum 1
Arundinella 1
Asaccharobacter 11 2
Asaccharospora 102
Asaia 4 1
Asinibacterium 3
Asteroleplasma 73 159 1
Asticcacaulis 1 30 168
Atlantibacter 1
Atopobacter 3
Atopobium 118 218 3 147
Atopococcus 11
Atopostipes 36
Aurantimicrobium 1
Aurantimonas 4
Auraticoccus 3 3
Aureibacter 5
Aureicoccus 1
Aureimonas 1 1 1
Aureispira 1
Aureitalea 3
Auricoccus 1
Auritidibacter 1
Austwickia 1
Avibacterium 38 54
Azoarcus 4 1 30
Azohydromonas 2 5
Azonexus 8
Azorhizobium 1 1
Azorhizophilus 1
Azospira 12 3 1
Azospirillum 2 196 2 85
Azotomonas 1
Bacillus 80 5 29 282
Bacillus altitudinis complex 3
Bacteria 2
Bacterioplanes 1 1
Bacteriovorax 1 15 6
Bacteroides 833 601 38 467
Baia 43
Balneatrix 7
Balneola 113 37
Barnesiella 440 497 5 12
Barrientosiimonas 17
Bartonella 3 23
Basfia 3 1
Basilea 1 1
Batis 1
Bdellovibrio 1 4
Beduini 1
Beggiatoa 1 1
Beijerinckia 2
Belliella 14 3
Bellilinea 2
Belnapia 1 1
Bergeyella 15 7
Bernardetia 48 1
Betainfluenzavirus 1
Betapapillomavirus 1
Beutenbergia 1
Bibersteinia 1 2
Bifidobacterium 653 583 22 448
Bilophila 641 2 33 414
Biostraticola 16
Bisgaardia 39
Bittarella 8
Bizionia 2
Blancoa 1
Blastocatella 3
Blastochloris 6
Blastococcus 1 3
Blastocystis 2
Blastomonas 1
Blastopirellula 12
Blattabacterium 4
Blautia 836 601 39 466
Bogoriella 8
Bombiscardovia 1 3 1
Bordetella 35 4
Borrelia 3 13
Borreliella 4
Bosea 3 5 7
Boseongicola 2
Bowmanella 37
Brachiaria 1
Brachybacterium 15 10 65
Brachymonas 1
Brachyspira 14 24
Bradymonas 1
Bradyrhizobium 12 1 15
Branchiibius 4
Brassicibacter 424 5
Brenneria 233 17
Breoghania 1
Brevefilum 1
Brevibacillus 54 1 48
Brevibacterium 68 71 37
Brevifollis 8
Brevinema 3
Brevundimonas 14 23 16
Brochothrix 6 277
Brockia 13
Brucella 2 1
Bryobacter 3
Bulleidia 4 38 1 81
Burkholderia 2 29 11 129
Burkholderia cepacia complex 7 1 5
Bursatella 1
Bursera 1
Buttiauxella 64 1 1
Butyricicoccus 79 352 37 16
Butyricimonas 478 512 31 354
Butyrivibrio 430 584 30 306
Bythopirellula 5
Caballeronia 14
Cabomba 1
Caedibacter 4
Caenispirillum 13
Caldalkalibacillus 73
Caldanaerobacter 1 57 21
Caldanaerobius 18
Caldanaerovirga 2
Caldicellulosiruptor 36 1 382
Caldicoprobacter 126 10
Caldilinea 6 161
Caldimicrobium 1 1
Caldimonas 12
Caldinitratiruptor 148
Caldisalinibacter 274
Caldisericum 1 1
Calditerrivibrio 3 1
Caldithrix 1 97
Callimico 1
Callithrix 1
Calochaete 6
Calolisianthus 1
Caloramator 1 399 10 411
Caloribacterium 7
Calothrix 60 202
Camarhynchus 1
Camelimonas 2
Camellia 1
Caminibacter 1 1
Caminicella 374 4
Campylobacter 293 243 7 167
Campylotropis 1
Candidatus Amoebophilus 1 361
Candidatus Aquiluna 1
Candidatus Arthromitus 4
Candidatus Atelocyanobacterium 1
Candidatus Azobacteroides 45
Candidatus Babela 2
Candidatus Blochmannia 117
Candidatus Cardinium 1
Candidatus Cloacimonas 1
Candidatus Contubernalis 46
Candidatus Endobugula 27
Candidatus Endolissoclinum 1
Candidatus Glomeribacter 1 181
Candidatus Gullanella 2
Candidatus Hepatoplasma 1
Candidatus Ishikawaella 1
Candidatus Izimaplasma 1
Candidatus Kinetoplastibacterium 4
Candidatus Koribacter 2
Candidatus Microthrix 1
Candidatus Midichloria 1
Candidatus Nitrosoglobus 1
Candidatus Nucleicultrix 1
Candidatus Pelagibacter 4 1
Candidatus Phlomobacter 8
Candidatus Phytoplasma 1 8 360
Candidatus Planktophila 1 2
Candidatus Portiera 1
Candidatus Protochlamydia 2
Candidatus Puniceispirillum 1
Candidatus Regiella 13
Candidatus Rhabdochlamydia 41
Candidatus Saccharimonas 20
Candidatus Scalindua 8
Candidatus Soleaferrea 537 4
Candidatus Solibacter 1
Candidatus Stoquefichus 127 1 2
Candidatus Sulcia 1 3
Candidatus Symbiobacter 1
Candidatus Tammella 194
Candidatus Vidania 1
Candidatus Walczuchella 1
Capnocytophaga 13 13 11
Caproiciproducens 1 31 4
Carboxydocella 19 251
Carboxydothermus 5 4
Carboxylicivirga 168 1
Carcinoscorpius 1
Cardiobacterium 10 81 9
Carnimonas 13
Carnobacterium 10 2 17
Carsonella 1
Casaltella 380 4
Cassena 1
Castellaniella 1
Catabacter 105 109 3
Catellicoccus 1 2
Catenibacterium 306 198 1 150
Catenisphaera 59 2
Catenovulum 1
Catenulispora 2 4
Catonella 11 576 17 356
Caulobacter 4 13 7
Cecembia 12
Cedecea 57
Celeribacter 3
Celerinatantimonas 6
Cellulomonas 43 14
Cellulophaga 4 4
Cellulosibacter 20
Cellulosilyticum 15 559 2 4
Cellulosimicrobium 3
Cellvibrio 16 5
Centipeda 19
Cerasicoccus 124 109
Cereibacter 2
Cesiribacter 22
Cetobacterium 4 21 28
Chamaesiphon 4 3
Chania 11 3
Chelativorans 6 1
Chelatococcus 2 1
Chelonobacter 1 15
Chiayiivirga 2
Chiropotes 1
Chishuiella 5
Chitinilyticum 2
Chitinimonas 13
Chitinispirillum 7
Chitinivibrio 2
Chitinolyticbacter 1
Chitinophaga 21 13
Chlamydia 1 2
Chloracidobacterium 10 3
Chlorobaculum 1 359
Chlorobium 1 1
Chlorococcum 1
Chloroflexus 1
Chlorogloeopsis 8
Chloroherpeton 11 4
Chloromonas 1
Chondrocystis 1
Chondromyces 2 20
Chordaria 1
Christensenella 135 90 17 21
Chromatium 3 111
Chromobacterium 9 36
Chromohalobacter 1
Chroococcidiopsis 2 1
Chroococcus 1 157
Chryseobacterium 11 34 42
Chryseolinea 10 4
Chryseomicrobium 12
Chrysopa 1
Chthoniobacter 4 15
Chthonomonas 39 4
Cichlasoma 1
Cintractia 1
Citreitalea 1
Citricoccus 1 1
Citromicrobium 3
Clarkia 1
Clavibacter 2 4
Cloacibacillus 116 84 29
Cloacibacterium 6 14 4
Clostridiisalibacter 6
Clostridioides 515 59 3 21
Clostridium 818 594 38 459
Cnuella 3
Cobetia 1
Cocleimonas 2
Coenonia 2
Cohaesibacter 1 1
Cohnella 39 185
Coleofasciculus 1
Colidextribacter 1 25
Colinus 1
Collimonas 19 5
Collinsella 809 519 34 374
Colwellia 18 4
Comamonas 31 25 28
Commensalibacter 2
Conchiformibius 1
Conexibacter 6 2
Confluentimicrobium 1
Congregibacter 3
coot 1
Coprinellus 1
Coprobacillus 171 284 5 427
Coprobacter 349 380 11 5
Coprococcus 2 601 33 457
Coprothermobacter 7 31 4
Coptodon 1
Coptothyris 1
Coraliomargarita 34 144
Corallibacter 1
Coriobacterium 12 2 56
Corticibacter 2
Cortinarius 1
Corynebacterium 495 345 9 233
Cottus 1
Coturnix 1
Couchioplanes 7
Couratari 1
Coxiella 13 1
Crambe 1
Cratogeomys 1
Craurococcus 2
Crepis 1
Criblamydia 29
Crinalium 1 1
Croceibacter 6 1
Croceicoccus 1
Cromidon 1
Cronobacter 86 45 4
Cronodrilus 1
Crossiella 1
Cruoricaptor 1 37
Cryobacterium 11 3 1
Cryomorpha 56
Cryptanaerobacter 1
Cryptobacterium 3 187 1
Cryptococcus 13
Cryptomonas 1
Cryptosporangium 1
Cubophis 1
Cucumibacter 2
Culex 1
Culturomica 1
Cupriavidus 2 22 6
Curculigo 1
Curtobacterium 1 4
Curvibacter 10 3 19
Cutibacterium 50 6 6
Cyanobacterium 25 65
Cyanobium 1 3 1
Cyanothece 1
Cyclobacterium 27 4
Cycloclasticus 17 9
Cyclonatronum 3
Cygnodraco 1
Cylindrospermum 1
Cyphomandra 5 1
Cyphophthalmus 1
Cystobacter 26 10
Cytophaga 1 36 1
Dactylopterus 1
Dactylosporangium 4
Damaliscus 1
Danthonia 1
Dasania 12
Dasypus 1
Datura 1
Dechloromonas 1 48
Deefgea 5 1
Deferribacter 16 89
Deferrisoma 16
Defluviicoccus 7
Defluviimonas 3
Defluviitalea 2 114
Defluviitoga 3 1
Dehalobacter 114 5 4
Dehalobacterium 9 178
Dehalococcoides 25 3
Dehalogenimonas 101 61
Deinococcus 10 63 1 216
Delftia 81 5 12
Deltavirus 1
Demequina 30 3
Dendrosporobacter 35
Denitratisoma 1 7 44
Denitrobacter 1
Denitrobacterium 1 7 1
Denitrovibrio 3
Dermabacter 57 37 10
Dermacoccus 1 1 4
Dermatosorus 1
Derxia 23
Desemzia 105 1
Desertibacter 4
Desmospora 5
Desulfacinum 2 24
Desulfallas 16 1
Desulfarculus 93 1
Desulfatibacillum 2 1
Desulfatiferula 14
Desulfatiglans 4
Desulfatirhabdium 1
Desulfatitalea 7
Desulfitibacter 1 41 3
Desulfitispora 23
Desulfitobacterium 1 56 100
Desulfobacca 18 1
Desulfobacter 7 44
Desulfobacterium 196 1
Desulfobacula 3
Desulfobaculum 8
Desulfobotulus 3
Desulfobulbus 46 1
Desulfocapsa 1 1
Desulfocarbo 84
Desulfocella 1 189
Desulfococcus 3 4
Desulfoconvexum 1
Desulfocurvibacter 1
Desulfocurvus 2
Desulfofaba 25
Desulfofarcimen 140 18
Desulfofrigus 24 34
Desulfofundulus 58 59
Desulfofustis 7
Desulfoglaeba 150
Desulfohalobium 3 3
Desulfohalotomaculum 410 51
Desulfohalovibrio 47
Desulfomicrobium 140 34
Desulfomonile 6 77
Desulfonatronobacter 3
Desulfonatronovibrio 5 83
Desulfonatronum 24 131
Desulfonauticus 9 40
Desulfonema 18
Desulfonispora 59
Desulfoplanes 9
Desulforegula 47
Desulforhabdus 1
Desulfosalsimonas 2
Desulfosarcina 19 23
Desulfosoma 80
Desulfosporosinus 1 128 1 211
Desulfotalea 1 2
Desulfothermus 7
Desulfotomaculum 2 465 10 238
Desulfovibrio 405 537 22 364
Desulfovirga 8
Desulfurella 3 6
Desulfuribacillus 5
Desulfurispira 2
Desulfurispirillum 98
Desulfurispora 325 198
Desulfurivibrio 2 1
Desulfurobacterium 4 1
Desulfurococcus 1
Desulfuromonas 36 21
Desulfuromusa 2 210
Dethiobacter 1 8 37
Dethiosulfatibacter 174
Dethiosulfovibrio 53 213
Devosia 1 50 160
Devriesea 1
Dialister 515 524 13 266
Diaphorobacter 1 3 1
Dichelobacter 2
Dichotomicrobium 7
Dickeya 10 1 14
Dictyoglomus 40 1
Dictyostelium 1
Dielma 329 330 9 6
Dientamoeba 1
Dietzia 3 77 21
Dinoroseobacter 1
Diplorickettsia 12
Diplosphaera 8
Dissulfuribacter 7
Dokdonella 9 173
Dokdonia 15 4
Dolichospermum 301
Dolosicoccus 2
Dolosigranulum 4 107
Dongia 119
Dorea 823 596 38 455
Doritaenopsis 1
Draconibacterium 10 1
Drimiopsis 1
Drosophila 1
Dubautia 1
Duganella 1 2
Duncaniella 4
Duodenibacillus 8 1
Dyadobacter 48 139
Dyella 5 2
Dysgonomonas 11 389 4 356
Echinicola 37 4
Echinometra 1
Echinops 1
Ectothiorhodosinus 3
Ectothiorhodospira 17 99
Edaphobacter 50
Edwardsiella 10 35
Effusibacillus 114
Eggerthella 608 466 25 344
Eggerthia 2 191
Egibacter 1
Egicoccus 1
Ehrlichia 9 125
Eikenella 11 6 2
Eionea 1
Eisenbergiella 541 449 25 5
Eisenibacter 69
Ekhidna 1
Elassoma 1
Elizabethkingia 22 6
Elodea 1
Elstera 3
Elusimicrobium 7 38 5
Emcibacter 67
Emergencia 1
Empedobacter 8 1
Emticicia 108 2 316
Enchytraeus 1
Endobacter 1
Endomicrobium 1
Endozoicomonas 1
Enhydrobacter 5
Enorma 81 57 3
Ensifer 1 2 1
Enterobacter 219 34 10 198
Enterococcus 152 112 29 370
Enterorhabdus 283 181 7 6
Enterovibrio 1
Enterovirus 1
Entomoplasma 16 6
Epibacterium 1
Epichloe 1
Epulopiscium 63 4 1
Ercella 167 1
Ereboglobus 3
Eremococcus 22 2
Erinaceus 1
Erwinia 1 106 1 127
Erysipelatoclostridium 797 598 36 22
Erysipelothrix 383 3 358
Erythrobacter 11 51
Erythromicrobium 1
Escherichia 1 53 12 334
Ethanoligenens 489 208
Eubacterium 168 601 39 446
Eucorethra 1
Eudoraea 41
Eudyptes 1
Euglena 1
Euphorbia 1
Euryhalocaulis 7
Euzebya 18 208
Euzebyella 1
Exiguobacterium 24 9
Exserohilum 1
Extensimonas 1
Ezakiella 33 1
Fabibacter 6
Facklamia 56 452 52
Faecalibacterium 814 600 38 463
Faecalibaculum 1
Faecalicatena 362 22
Faecalicoccus 359 4 1
Faecalitalea 64 19 51
Falcatimonas 1 15
Falsiporphyromonas 157
Falsirhodobacter 1
Fangia 14
Fastidiosipila 81 43 2 3
Fenollaria 315 5 3
Fergusonia 1 10
Fermentimonas 4
Ferrimicrobium 2 7
Ferrimonas 31 5
Ferrithrix 90
Ferrovibrio 2
Ferrovum 2
Ferruginibacter 1 43
Fervidicella 6
Fervidobacterium 13
Fibrella 3
Fibrobacter 95 113 47
Fictibacillus 23 4
Ficus 1
Filifactor 2 182 19 126
Filimonas 1 4
Fimbriimonas 18 2
Finegoldia 470 433 6 226
Fischerella 1
Flammeovirga 23 109
Flavaestuariibacter 1
Flavicella 4
Flaviflexus 17 3
Flavihumibacter 3
Flavisolibacter 1 1 8
Flavitalea 1 6
Flavivirga 1
Flavobacterium 423 30 21
Flavonifractor 810 580 33 23
Flectobacillus 58
Flexibacter 1 4 2
Flexistipes 38 1
Flexithrix 10
Flexivirga 1
Flintibacter 26
Fluoribacter 1
Fluviicola 15 3 1
Fluviimonas 230
Fodinibius 2
Fodinicurvata 261 1
Fontibacter 9
Fonticella 2 54
Formosa 5
Fournierella 1 16
Francisella 2 39 24
Franconibacter 8
Frankia 4
Fratercula 1
Frateuria 3 1
Fretibacter 14
Fretibacterium 103 4
Friedmanniella 17 11
Frigoribacterium 1 1
Frischella 2 3
Frondicola 1 1
Fructobacillus 22 29
Fuchsiella 5
Fucophilus 2
Fulvitalea 40
Fulvivirga 56
Fusarium fujikuroi species complex 1
Fusibacter 106 26
Fusicatenibacter 794 594 18 4
Fusobacterium 142 277 6 209
Gabonibacter 10
Gadus 1
Gaetbulibacter 1
Gaiella 2 25
Galago 1
Galenea 25
Gallaecimonas 3
Gallibacterium 1 28 13
Gallicola 75 33 1
Gallionella 19 51
Garciella 7
Gardnerella 44 63 2 26
Garicola 2
Garritya 2
Gelria 228 1
Gemella 185 284 4 392
Geminicoccus 1 21
Geminocystis 1
Gemmata 1 5 6
Gemmatimonas 15 3
Gemmatirosa 3 1
Gemmiger 543 18
Gemmobacter 2 4
Gentiana 1
Geoalkalibacter 1
Geobacillus 6 26 12 159
Geobacter 20 25
Geodermatophilus 6 2
Geofilum 56
Geomicrobium 12
Geopsychrobacter 4
Georgenia 17 6
Geosporobacter 4
Geothermobacter 1
Geothrix 193 189
Geovibrio 1 10
Gibbsiella 4
Giesbergeria 1 2
Gilliamella 1
Gillichthys 1
Gillisia 16 242
Gilvimarinus 1
Gimesia 2
Glaciecola 46 79
Glaciimonas 2
Glaesserella 2 1
Gliocladium 1
Globicatella 2 14
Gloeobacter 7 1
Gloeothece 1
Gloriosa 1
Glossogobius 1
Gluconacetobacter 6 4
Gluconobacter 2 31
Glutamicibacter 42 45
Glycera 1
Glycocaulis 1 1
Glycomyces 8 31
Gorbachella 1 1
Gordonia 4 46 13
Gordonibacter 479 327 26 13
Gottschalkia 75 4
Gracilibacillus 54
Gracilibacter 3 263 3
Gracilimonas 160
Gramella 3 46
Granulibacter 4
Granulicatella 363 61 203
Granulicella 9 22
Granulosicoccus 38 1
Gryllotalpicola 6 1
Guggenheimella 208
Gulbenkiania 3
Guttera 1
Guyparkeria 1 2
Gymnocintractia 1
Gynuella 24 1
Haematobacter 3 3
Haematospirillum 2
Haemophilus 573 459 22 338
Hafnia 14 1 2 1
Hahella 106 49
Halanaerobacter 1 5
Halanaerobaculum 4
Halanaerobium 6 74
Halarsenatibacter 36
Haliangium 1 19 33
Haliea 1 6
Halioglobus 1 1
Haliscomenobacter 46 3
Halobacillus 21 4
Halobacteriovorax 26 7
Halobacteroides 3 1
Halocella 5 4
Halochromatium 115 34
Halodesulfovibrio 5
Haloferax 1
Haloferula 19
Halolactibacillus 4
Halomicronema 1 3
Halomonas 1 255 1 53
Halonatronum 3
Haloplasma 1 12
Halopolyspora 75
Halorhodospira 37 21
Halospina 8
Halospirulina 1
Halotalea 1
Halothermothrix 80 1
Halothiobacillus 22 3
Halyseosphaera 1
Hartmannibacter 1
Hathewaya 314 380
Hazenella 10
Helcococcus 22 87 43
Heleococcum 1
Helicobacter 4 21 136
Heliimonas 7
Heliobacterium 3 1
Heliomonas 1
Heliophilum 6
Heliorestis 7 164
Heliothrix 1
Hellea 7
Hemizonia 1
Henriciella 232
Hephaestia 2
Heratemis 1
Herbaspirillum 266 30 13 170
Herbinix 216 6 4
Herichthys 1
Herminiimonas 109 29
Herpetosiphon 4 1
Hespellia 522 577 16
Hilliella 1
Hippea 2 1
Hirschia 1
Histophilus 4 1
Hoeflea 1
Holdemanella 358 4 205
Holdemania 601 493 23 393
Holophaga 1
Hoppeia 2
Hordeum 1
Howardella 131 405 4
Hoyosella 23
Hugenholtzia 18
Humibacter 13
Hungateiclostridium 2 462 4 386
Hungatella 563 34 18
Hwangdonia 8
Hydatigera 1
Hydnotryopsis 1
Hydrocarboniphaga 1 1 301
Hydrocoleum 7
Hydrogenibacillus 43 5
Hydrogenispora 298
Hydrogenoanaerobacterium 241 494
Hydrogenobacter 2 3
Hydrogenobaculum 4
Hydrogenophaga 1 4 1
Hydrogenophilus 3 123 168
Hydrogenothermus 7
Hydrogenovibrio 15 8
Hydrotalea 1 12
Hylemonella 1
Hymenobacter 3 21 264
Hyperoodon 1
Hyperoplus 1
Hyphomicrobium 2 9 53
Hyphomonas 5 32
Iamia 1 4
Ianmoorea 3
Icaria 1
Ichthyobacterium 1
Ideonella 2 1
Idiomarina 5 21
Ignatzschineria 6 1
Ignavibacterium 27 30
Ignavigranum 2 56
Ihubacter 29
Ileibacterium 3
Ilumatobacter 48
Ilyobacter 4
Immundisolibacter 3
Imperialibacter 16
Imtechella 1
Indibacter 14
Indioceanicola 3
Inquilinus 6 4
Insolitispirillum 133 231
Intestinibacillus 9
Intestinibacter 812 504 21 11
Intestinimonas 760 574 37 20
Iodobacter 6 3
Isochromatium 3
Janibacter 2 2
Jannaschia 1 2
Janthinobacterium 4 14
Jatropha 1
Jatrophihabitans 3 1
Jeotgalibaca 3
Jeotgalibacillus 2
Jeotgalicoccus 2 35 4
Jiangella 1 13
Johnsonella 17 419 417
Jonesia 49 8
Jonquetella 11 64 1
Julidochromis 1
Kaistia 21 10
Kallipyga 55 1
Kallotenue 10
Kandleria 94
Kangiella 22 1
Kappapapillomavirus 1
Kastovskya 3
Keratinibaculum 7
Ketobacter 1
Ketogulonicigenium 2 1
Kiloniella 30 3
Kineococcus 4 2
Kineosporia 4
Kingella 12 4 5
Kistimonas 1
Kitasatospora 6 22
Klebsiella 156 58 8 131
Kluyvera 573 6 5 2
Kockovaella 1
Kocuria 14 18 15
Kohautia 1
Komagataeibacter 22 3
Kordia 1
Kordiimonas 2
Koreibacter 2
Kosakonia 136 14
Kosmotoga 1 11
Kozakia 1 3
Kribbella 161 27
Ktedobacter 1
Kushneria 1 3 90
Kutzneria 1
Kyrpidia 72 1
Kytococcus 2 2
Labilibacter 4
Labilithrix 37
Labrenzia 1
Labrys 2
Laceyella 5 26
Lachnoanaerobaculum 23 582 4
Lachnobacterium 13 426 29 392
Lachnoclostridium 2 600 39 22
Lachnospira 752 557 35 456
Lachnotalea 3
Lacibacter 3 2
Lacibacterium 74
Lacihabitans 6
Lacimicrobium 1
Lacinutrix 1 4
Lactivibrio 2
Lactobacillus 614 583 24 397
Lactococcus 286 325 10 205
Lactonifactor 500 418 29 2
Lactovum 138
Lacunisphaera 3
Lagierella 1
Lampetra 1
Lamprocystis 2
Laribacter 3 3
Larkinella 1
Lautropia 20 25 28
Lawsonella 1
Lawsonia 340 6
Lebetimonas 8
Lecanora 1
Leclercia 1
Legionella 1 32 267
Leifsonia 2 1 1
Leishmania 1
Leisingera 1
Lelliottia 1 129
Leminorella 4 1
Lentibacillus 28 61
Lentisphaera 4
Lentivirus 1
Lentzea 3
Lepidocolaptes 1
Lepidozona 1
Leptofauchea 10
Leptolinea 54
Leptolyngbya 2 1 103
Leptonema 10
Leptospira 10 153
Leptospirillum 13 1
Leptothrix 75
Leptotrichia 43 28 27
Leucobacter 20 9
Leucocintractia 1
Leuconostoc 86 432 4 214
Leucothrix 4 6
Levilinea 1
Levinea Young et al. 1971 61 17 19 89
Levyella 235 1
Lewinella 7 24
Libanicoccus 1 1
Liberibacter 2 6 31
Limibacillus 14
Limibacter 1
Limimaricola 1
Limimonas 3
Limisphaera 5
Limnobacter 1 23 292
Limnobaculum 1
Limnochorda 1 1
Limnohabitans 2 5
Limnoraphis 3
Lishizhenia 2
Listeria 1 145 74
Litoribacillus 47
Litoribacter 12
Litoribrevibacter 6
Litoricola 26 14
Litorilinea 7
Litorilituus 40 4
Loktanella 5 1
Lonchitis 1
Longilinea 3 2
Longimonas 37
Lucinoma 1
Ludwigia 1
Luminiphilus 37
Luna cluster 1 1 3
Lunatimonas 2
Lupinus 1
Luteibacter 1 33 233
Luteibaculum 1
Luteimonas 8 9
Luteipulveratus 1
Luteitalea 1
Luteivirga 4
Luteococcus 10
Luteolibacter 1 18 182
Lutibacter 1 19 4
Lutibaculum 1
Lutispora 140 1
Lutra 1
Lysinibacillus 9 12 62
Lysinimonas 1
Lysobacter 2 46 88
MAC 3
Macaca 1
Macrococcus 1 8 188
Macropus 1
Madoqua 1
Mageeibacillus 1
Magnetococcus 9 1
Magnetospira 3 1
Magnetospirillum 4 3
Magnetovibrio 3
Mahella 14
Malassezia 2
Maledivibacter 22
Mangrovibacter 1
Mangroviflexus 2
Mannheimia 8 54 174
Maribacter 1 5
Maricaulis 15 3
Marichromatium 1 10 68
Marinicauda 1
Marinicella 8
Marinifilum 147
Mariniflexile 3 4
Marinilabilia 32 1
Marinilactibacillus 4
Marinimicrobium 1 1
Marininema 2
Mariniphaga 16
Mariniradius 8
Marinitalea Kim et al. 2011 1
Marinithermofilum 2
Marinithermus 2
Marinitoga 2 11
Marinobacter 95 25
Marinobacterium 20 4
Marinococcus 4 26
Marinomonas 20 7
Marinoscillum 23
Marinospirillum 33 78
Marinovum 1
Mariprofundus 17 1
Marispirillum 46
Maritalea 1
Maritimibacter Lee et al. 2007 emend. Zhong et al. 2015 1
Marivirga 2 1
Marivita 1 2
Marivivens 1
Marixanthomonas 17
Marmoricola 11 1
Marseillibacter 1 36
Martelella 1 2
Marvinbryantia 634 526 3 11
Massilia 7 14 20 4
Massilioclostridium 1 24
Massiliprevotella 3
Mastadenovirus 1
Mechercharimyces 10 2
Mediterranea 3
Megamonas 69 172 2 76
Meganema 16
Megasphaera 564 371 392
Meiothermus 1 21 170
Meiracyllium 1
Melaminivora 1
Melanochromis 1
Melghiribacillus 3
Melghirimyces 25
Melioribacter 402 11 4
Melissococcus 2 21
Melittangium 5 1
Meniscus 24
Merdibacter 1 7
Merdimonas 1 1
Mesoaciditoga 4
Mesoflavibacter 1
Mesonia 7 1
Mesoplasma 14 206
Mesorhizobium 10 8 7
Mesotoga 1
Metabacterium 1 2
Metakosakonia 2 1
Metallibacterium 1
Metallosphaera 1
Metaprevotella 3
Metarhizium 1
Methanimicrococcus 1
Methanobrevibacter 228 144 4 131
Methanocorpusculum 1 1 2
Methanolinea 1
Methanomassiliicoccus 26 22
Methanomethylophilus 23
Methanosphaera 40 22 2 36
Methylacidimicrobium van Teeseling et al. 2014 1
Methylarcula 16
Methylibium 6
Methylobacillus 56 192
Methylobacter 7
Methylobacterium 9 20 27
Methylocaldum 2 4
Methyloceanibacter 1
Methylocella 6 17
Methylococcus 1
Methylocystis 5 2
Methylogaea 1 34
Methyloglobulus 40
Methylohalobius 13
Methylohalomonas 5
Methylokorus 3
Methyloligella 2
Methylomagnum 3
Methylomarinovum 10
Methylomicrobium 4 3
Methylomonas 7 4
Methylomusa 4
Methylonatrum 3 241
Methyloparacoccus 2
Methylophaga 101 10
Methylophilus 17
Methylorubrum 4
Methylosinus 8
Methylosoma 1
Methylosphaera 4
Methylotenera 56 3
Methylothermus 1
Methyloversatilis 35 18
Methylovulum 1
Micavibrio 3
Microaerobacter 15
Microbacter 122
Microbacterium 11 150 86
Microbaicalia 1
Microbulbifer 7
Microcerotermes 1
Microchaete 3
Micrococcus 10 2 7
Microcoleus 62
Microcystis 1 3
Microlunatus 27 2
Micromonospora 5 25
Micropruina 1 1
Microscilla 1
Microterricola 4
Microtetraspora 4 4
Microvirga 1 7 3
Microvirgula 2
Microvirus 2
Millisia 1
Miniimonas 1
Mitsuaria 3
Mitsuokella 18 53 3 191
Mixta 1
Mizugakiibacter 15
Mobilitalea 68 2
Mobiluncus 127 193 2 48
Modestobacter 2 64 3
Mogibacterium 526 428 1 366
Moheibacter 12
Molineria 1
Mongoliicoccus 9
Mongoliitalea 1
Monoglobus 4
Moorea 41 4
Mooreia 4
Moorella 23 331
Moraxella 14 161 11
Mordavella 1 6 4
Morganella 4 120 1 54
Moritella 1 1
Moryella 698 450 4 70
Mucilaginibacter 25 5 4
Mucinivorans 31 1
Mucispirillum 3 2
Murdochiella 245 1 4
Muribaculum 4
Muricauda 2 14
Muriicola 1
Murimonas 554 3
Myceligenerans 12
Mycetohabitans 9
Mycobacterium 33 25 99
Mycobacterium chelonae complex 3
Mycobacterium complex 3
Mycobacterium terrae complex 4
Mycolicibacterium 1 12 10
Mycoplana 1
Mycoplasma 10 399 1 352
Myroides 12 10
Mytilus 1
Myxococcus 1 1
Nafulsella 10
Nakamurella 2 4
Nannocystis 11 23
Nanoscypha 1
Nardonella 1
Natranaerobaculum 3
Natranaerobius 17 1
Natranaerovirga 374 7
Natribacillus 1
Natroniella 2
Natronincola 52 353
Naumannella 8
Nautilia 5 1
Ndongobacter 1
Necropsobacter 9
Negativibacillus 1 29 3
Negativicoccus 132 165 174
Neglecta 1
Neisseria 82 38 12 94
Nelumbo 1
Neoasaia 1
Neochlamydia 1
Neorhizobium 4
Neorickettsia 1 6
Neoscardovia 45
Neptuniibacter 2
Neptunomonas 1 1
Nereis 1
Nesterenkonia 62 10
Nevskia 1 3 14
Niabella 1 433 92
Niastella 1 3 3
Nibribacter 42
Nicoletella 4
Nigella 1
Nisaea 25
Nitratifractor 2
Nitratireductor 4
Nitratiruptor 1 1
Nitriliruptor 6 3
Nitrincola 1 1
Nitrobacter 4 1
Nitrococcus 18
Nitrolancea 4
Nitrosococcus 1 17 54
Nitrosomonas 2 176 5 3
Nitrosopumilus 1
Nitrososphaera 1 1
Nitrosospira 1 3 3
Nitrosovibrio 2
Nitrospina 2
Nitrospira 1 8 2
Nitrospirillum 4 1
Niveispirillum 129 1
Nocardia 4 7
Nocardioides 3 68 4
Nocardiopsis 23 6
Nodularia 1 52
Nonomuraea 15 67
Norovirus 1
Nosocomiicoccus 6
Nostoc 1 147
Novibacillus 8 4
Noviherbaspirillum 13
Novispirillum 73 255
Novosphingobium 7 21 16
Oblitimonas 1
Oceanibaculum 2
Oceanicaulis 3 3
Oceanicoccus 31 1
Oceanimonas 4 1
Oceanirhabdus 7
Oceanisphaera 2 4
Oceanithermus 1
Oceanobacillus 16 4
Oceanobacter 1
Oceanospirillum 56 5
Oceanotoga 1
Ochrobactrum 28 3 32
Octadecabacter 3 6
Odoribacter 619 483 33 407
Oenococcus 49 87
Oerskovia 1
Ohtaekwangia 50
Okeania 1
Oleibacter 3
Oleiphilus 3
Oleispira 2
Oleomonas 28
Oligella 8 16 19
Oligosphaera 22
Oligotropha 1
Olivibacter 7 307
Olleya 4
Olsenella 64 303 9 39
Opitutus 1 13 6
Orbus 2
Orenia 30
Oreochromis 1
Oribacterium 41 590 28 381
Orientia 63 1
Ornatilinea 4
Ornithinicoccus 1 2
Ornithinimicrobium 4
Ornithobacterium 3 4
Orrella 1
Orthobunyavirus 1
Orthopoxvirus 1
Oscillatoria 1 113
Oscillibacter 740 593 38 25
Oscillospira 618 2 32 439
Osmadenia 1
Otariodibacter 14
Ottowia 3
Owenweeksia 1 1
Oxalicibacterium 65
Oxalobacter 176 8 197
Oxalophagus 1 27
Oxobacter 5 137
Oxybasis 1
Oxynema 3
Pachytichospora 2
Paenalcaligenes 1 1
Paenarthrobacter 1 1
Paenibacillus 1 479 13 154
Paeniclostridium 67 4
Paeniglutamicibacter 1
Paenisporosarcina 48 8
Pagothenia 1
Palicourea 1
Paludibacter 73 3 8
Paludibacterium 3
Paludibaculum 6
Paludisphaera 3
Pamelaescincus 1
Panacagrimonas 2
Pandoraea 13 5
Pannonibacter 4
Panonychus 1
Pantoea 187 88 1 12
Papilio 1
Papillibacter 418 297 29
Parabacteroides 757 595 37 463
Paraburkholderia 48 1 107
Parachlamydia 2 1
Paraclostridium 23
Paracoccus 1 20 24
Paraeggerthella 15 59
Paraferrimonas 1
Parafilimonas 31
Parageobacillus 5 25
Paraglaciecola 6 1
Paraliobacillus 3
Parapanteles 1
Parapedobacter 14 132
Paraperlucidibaca 1
Paraphotobacterium 1
Paraprevotella 209 507 8 342
Pararheinheimera 7 1
Pararhodospirillum 1 1
Parasaccharibacter 6 1
Parascardovia 4 3 111
Parascaris 1
Parasegetibacter 2
Parashewanella 2 1
Parasporobacterium 171 239 17
Parasutterella 591 558 24 14
Parechinus 1
Parolsenella 1
Parvibacter 94 32 1
Parvibaculum 1
Parvimonas 96 118 6
Parvularcula 9 1
Pasteurella 20 16 42
Pasteuria 16
Patulibacter 2 1 1
Paucibacter 2 12
Paucimonas 2
Pectinatus 106 1 342
Pectobacterium 3 39 4
Pediococcus 34 69 264
Pedobacter 4 187 23 417
Pedomicrobium 1 2 18
Pelagibaca 1
Pelagibacterium 1
Pelagibius 2
Pelagicoccus 39 124
Pelistega 1 3
Pelobacter 22 14
Pelodictyon 1
Pelodiscus 1
Pelolinea 4 1
Pelomonas 20 11 4
Pelosinus 151 4
Pelospora 27
Pelotomaculum 63 154
Pelvicachromis 1
Penicillium 1
Peptoanaerobacter 23
Peptoclostridium 664 94 1
Peptococcus 405 236 5 412
Peptoniphilus 437 480 6 414
Peptostreptococcus 205 250 2 123
Perameles 1
Peredibacter 8
Perexilibacter 29
Perlucidibaca 3
Permianibacter 24
Perodicticus 1
Persephonella 1
Persicaria 1
Persicirhabdus 11
Persicitalea 38
Persicobacter 7 5
Petrimonas 15 4
Petrotoga 4
Petunia 1
Phaeobacter 16
Phaeobacterium 6
Phaeochromatium 8
Phaeocystidibacter 7
Phaeodactylibacter 8
Phaffomyces 1
Phascolarctobacterium 550 510 19 413
Phaseolibacter 2
Phenylobacterium 2 14 21
Phlebia 1
Phocaeicola 1 144
Phocea 11
Phoenicibacter 1
Phormidium 2
Photobacterium 1 17 6
Photorhabdus 70 4
Phreatobacter 1 1
Phycicoccus 1
Phycisphaera 2 1
Phyllobacterium 30 1
Phytoactinopolyspora 2
Phytomonospora 31
Pigmentiphaga 24
Pilibacter 16
Pilimelia 1 12
Pimelobacter 3
Pirellula 13 2
Pisciglobus 15
Piscinibacter 5
Piscirickettsia 9 1
Plagiomnium 1
Planctomyces 1 4
Planctopirus 1 2
plane trees 1
Planifilum 1 16 229
Planktomarina 2
Planktothrix 1 3
Planococcus 65 66
Planomicrobium 39 3 13
Plantactinospora 1 1
Plantibacter 1 1
Plasmodium 1
Plasticicumulans 99
Pleionea 1
Pleomorphomonas 6 2
Plesiocystis 3
Pleurocapsa 1
Pleuronectes 1
Pluralibacter 22 12
Polaribacter 1 10
Polaromonas 2 8
Polycladomyces 22
Polymorphobacter 2
Polymorphum 3
Polynucleobacter 2 75
Pontibaca 2
Pontibacillus 94 95
Pontibacter 1 12 161
Ponticaulis 2
Pontivivens 1
Populus 1
Porphyrobacter 1 2 1
Porphyromonas 364 486 16 383
Portibacter 2
Porticoccus 1
Povalibacter 1
Pragia 168 4
Prauserella 2
Prevotella 477 600 23 439
Prochlorococcus 2 5
Prochlorothrix 2
Prognathochromis 1
Prolixibacter 3
Promicromonospora 1 1
Propionibacterium 122 16 12 16
Propionicimonas 1 2
Propioniferax 3 109
Propionigenium 3 19
Propionimicrobium 11
Propionispira 2 21
Propionispora 43 302
Propionivibrio 2 29 29
Prosthecobacter 17 70
Prosthecochloris 1 4
Proteiniborus 134
Proteiniclasticum 1
Proteiniphilum 40 15 4
Proteinivorax 55
Proteocatella 105 3
Proteus 17 96 17 21
Providencia 132 27
Prunus 1
Psathyrostachys 1
Pseudacidovorax 2
Pseudaeromonas 29
Pseudaminobacter 2
Pseudanabaena 4
Pseudarcicella 36 1
Pseudarthrobacter 1
Pseudescherichia 19
Pseudoalteromonas 15
Pseudobacteroides 8
Pseudobutyrivibrio 828 356 27 416
Pseudocentrotus 1
Pseudochrobactrum 1 14 6
Pseudoclavibacter 52 237 17
Pseudoclostridium 4 324
Pseudodesulfovibrio 64 4
Pseudoduganella 6
Pseudoflavitalea 4
Pseudoflavonifractor 499 497 31 17
Pseudofulvibacter 1
Pseudoglutamicibacter 12 2 2
Pseudogulbenkiania 1
Pseudohongiella 6 2
Pseudokineococcus 12
Pseudolabrys 1
pseudomallei group 4
Pseudomaricurvus 2
Pseudomonas 69 226 7 104
Pseudomonas chlororaphis group 18
Pseudonocardia 19 18
Pseudooceanicola 1
Pseudopedobacter 138 1 1
Pseudopropionibacterium 6 3
Pseudoramibacter 3 68 191
Pseudorhodobacter 60
Pseudorhodoferax 1
Pseudorhodoplanes 1
Pseudoscardovia 366
Pseudoscillatoria 257
Pseudospirillum 1
Pseudothermotoga 4
Pseudovibrio 2 1
Pseudoxanthobacter 5
Pseudoxanthomonas 6 23 6
Pseudozyma 1
Psychrilyobacter 13
Psychrobacter 2 84 178
Psychroflexus 24 38
Psychromicrobium 1
Psychromonas 18 10
Psychroserpens 2 5
Psychrosinus 11
Psychrosphaera 2
Pullulanibacillus 63
Puniceicoccus 67 37
Pusillimonas 3 1
Pustulibacterium 1
Pylodictis 1
Pyramidobacter 51 21 4
Pyrenomonas 1
Pyrinomonas 24
Pyrobaculum 1
Pyrocoelia 1
Pyrodictium 1
Pyxidicoccus 3
Qipengyuania 1
Quadrisphaera 1
Quasibacillus 15
Raffaelea 1
Rahnella 12 1
Ralstonia 15 11 26
Ramaria 1
Ramlibacter 3 2
Rangifer 1
Raoultella 31 1 5
Raoultibacter 11
Raphidiopsis 3
Rapidithrix 6
Rarobacter 39
Rathayibacter 2 1 2
Rehaibacterium 2
Reichenbachiella 9
Reinekea 106 1
Renibacterium 1
Renobacter 4
Reyranella 6
Rhabdochromatium 9
Rheinheimera 4 53 7
Rhizobacter 10
Rhizobium 13 27 5 6
Rhizomicrobium 13
Rhodanobacter 40 1
Rhodobaca 1
Rhodobacter 4 3 26
Rhodobium 1
Rhodococcus 24 3 83
Rhodocyclus 1
Rhodocytophaga 1 31
Rhodoferax 3 31
Rhodoluna 3
Rhodomicrobium 3 1
Rhodonellum 28
Rhodopila 1
Rhodopirellula 1 1
Rhodoplanes 1 1 21
Rhodopseudomonas 5 18 4
Rhodospira 5
Rhodospirillum 1 2 207
Rhodosporidiobolus 1
Rhodothalassium 11 4
Rhodothermus 5 382
Rhodovibrio 20 91
Rhodovulum 3 28 5
Rickettsia 106 254
Rickettsiella 16
Riemerella 3 3
Rikenella 2 3 12
Risungbinella 21
Rivibacter 1
Rivicola 6
Rivularia 37
Robbsia 8
Robiginitalea 1 1
Robiginitomaculum 7
Robinsoniella 181 458 33
Rodentibacter 20 9
Romboutsia 547 526 3 2
Roseateles 3 1
Roseburia 832 601 39 461
Roseiarcus 3
Roseibacterium 1 1
Roseiflexus 8 1
Roseimarinus 10
Roseimicrobium 20
Roseitalea 1
Roseivirga 29
Roseivivax 2
Rosenbergiella 122
Roseobacter 4
Roseococcus 1 7 9
Roseomonas 4 9 47
Roseospira 6 74
Roseovarius 1 4 3
Rothia 157 11 2 270
Rubellimicrobium 3 11 4
Rubidibacter 2
Rubidimonas 33
Rubinisphaera 3
Rubribacterium 1
Rubritalea 100 135
Rubritepida 1
Rubrivivax 2 2
Rubrobacter 1 30 6
Rudaea 4
Rudanella 6
Ruegeria 2 1
Rufibacter 27 4
Ruminiclostridium 34 589 38 181
Ruminobacter 41 5
Ruminococcus 2 601 39 463
Rummeliibacillus 1 29 2
Runella 45 151
Ruthenibacterium 1 33 6
Saccharibacillus 17
Saccharibacter 11
Saccharicrinis 36
Saccharofermentans 97 2
Saccharomonospora 123 3
Saccharophagus 1
Saccharopolyspora 38 119
Saccharospirillum 10
Saccharothrix 1 1
Sagittula 1
Saguinus 1
Salegentibacter 4
Salibacterium 5
Salimicrobium 16 3
Salinibacillus 15
Salinibacter 1
Salinibacterium 2
Salinicoccus 54 219
Salinicola 1 1
Salinimicrobium 1 3
Salinimonas 4
Salinisphaera 13 1
Salinispira 4
Salinispirillum 127
Salinispora 2
Salinivenus 1
Salinivibrio 21 13
Salinivirga 1
Salipiger 1
Salisaeta 48 92
Salmonella 4 9 20 58
Sambucus 1
Sandaracinobacter 2
Sandaracinus 6 1
Sanguibacter 2 4
Sapovirus 1
Saprospira 1
Sarcina 805 1 264
Scardovia 9 30 19
Schaalia 528 386 206
Schizothorax 1
Schlegelella 3 5 12
Schleiferia 8
Schlesneria 1
Schumannella 1
Schwartzia 11
Scriptaphyosemion 1
Scytonema 4
Sebaldella 1 32
Sedimentibacter 2 123 414
Sedimenticola 8 3
Sedimentisphaera 3
Sedimentitalea 1
Sediminibacillus 2
Sediminibacterium 1 13
Sediminicola 1
Sediminispirochaeta 1
Sediminitomix 44
Segetibacter 30 49
Segniliparus 20 1
Seinonella 16
Selenihalanaerobacter 46
Selenomonas 23 82 8 404
Sellimonas 1
Seminibacterium 1
Senegalimassilia 228 206 14 8
Seohaeicola 3
Seonamhaeicola 3
Septoria 1
Seres 1
Serinicoccus 11 14
Serpentinomonas 2
Serratia 9 74 5 307
Sharpea 18 176
Shewanella 86 258
Shigella 1 203 8
Shimazuella 1 6
Shimia 3
Shimwellia 1
Shinella 6 6 5
Shivajiella 2
Shuttleworthia 258 410 255
Siansivirga 1 3
Siccationidurans 4
Sideroxydans 1
Silanimonas 17
Silene 1
Silicimonas 1
Simalia 1
Simiduia 10 1
Simkania 7 1
Simonsiella 1 3
Simplexvirus 1
Simplicispira 1 3
Singulisphaera 1 3 5
Sinibacillus 37
Sinobaca 1
Sinobacterium 69
Sinomonas 6 1
Sinorhizobium 1 5
Sinorhizobium fredii group 1 4
Sinorhizobium/Ensifer group 1 3 5
Sinosporangium 8
Siphonobacter 24
Skermanella 1 39 173
Slackia 268 341 19 370
Smithella 7 2
Sneathia 10 53 21
Sneathiella 4
Snodgrassella 1 1
Snowella 11
Sodalis 7
Soehngenia 1 16
Solimonas 4 1
Solirubrobacter 1 11 4
Solitalea 22 1
Solobacterium 104 91 2 56
Sorangium 2 1 4
Sorex 1
Spelaeicoccus 7
Sphaerimonospora 3
Sphaerobacter 2
Sphaerochaeta 1 4
Sphaerospermopsis 1
Sphaerotilus 2
Sphenostylis 1
Sphingobacterium 4 102 3 411
Sphingobium 8 32 39
Sphingomicrobium 6
Sphingomonas Yabuuchi et al. 1990 emend. Feng et al. 2017 24 290 14 67
Sphingopyxis 3 13 3
Sphingorhabdus 4 1
Sphingosinicella 2 4
Spiribacter 10 4
Spirilliplanes 2
Spirillum 1 14
Spirochaeta 12 1
Spiroplasma 228 4
Spirosoma 4 5
Spirulina 5
Spodoptera 1
Spongiibacter 1 1
Spongiibacterium 1 1
Spongitalea 1
Sporacetigenium 89
Sporanaerobacter 6 1 5
Sporichthya 7 1
Sporisorium 1
Sporobacter 428 544 11 2
Sporobacterium 1 365 1 10
Sporobolomyces 1
Sporocytophaga 3
Sporohalobacter 12
Sporolactobacillus 3 110
Sporomusa 129
Sporosalibacterium 34
Sporosarcina 470 23 46
Sporotomaculum 97 203
Stackebrandtia 75 1
Stanieria 1
Staphylococcus 233 134 2 158
Stappia 1
Starria 48
Stella 127
Stenotrophomonas 29 36 48
Stenoxybacter 7
Stereum 1
Steroidobacter 15 2
Sterolibacterium 8 3
Stichodactyla 1
Stigmatella 14 1
Stomatobaculum 18 227 3
Streptacidiphilus 8
Streptobacillus 2 37 3
Streptococcus 827 593 39 456
Streptohalobacillus 3
Streptomonospora 173 1
Streptomyces 118 2 82
Streptosporangium 7 8
Stylosanthes 1
Subdoligranulum 823 579 22 19
Subsaximicrobium 1
Succinatimonas 6 38
Succiniclasticum 38 135 5 21
Succinimonas 41
Succinispira 61
Succinivibrio 9 77 102
Sufflavibacter 1
Sulfitobacter 1 4
Sulfobacillus 18 21
Sulfuricaulis 3
Sulfuricella 1
Sulfuricurvum 3 3
Sulfuriferula 3
Sulfuriflexus 1
Sulfurifustis 4 1
Sulfurihydrogenibium 1
Sulfurimonas 1 1
Sulfurisoma 3
Sulfuritalea 1
Sulfurivirga 14
Sulfurospirillum 2 12
Sulfurovum 1 1
Sungkyunkwania 1
Sunxiuqinia 31
Sutterella 549 551 30 445
Suttonella 10
Swaminathania 1
Symbiobacterium 12 249
Symploca 6
Synechococcus 4 4
Synergistes 15 4 11
Syntrophaceticus 20
Syntrophobacter 9 3
Syntrophobotulus 9 1
Syntrophococcus 31 346 11 2
Syntrophomonas 3 227 90
Syntrophorhabdus 17
Syntrophothermus 21 1
Syntrophus 12 3
Taeniopygia 1
Taibaiella 1 29
Tambourissa 1
Tamias 1
Tamilnaduibacter 11
Tamlana 3 1
Tangfeifania 10
Tannerella 11 194 9
Tanticharoenia 1
Taonella 1
Tapinothrix 7
Taraxacum 1
Tardiphaga 1
Tateyamaria 1
Tatumella 5 1
Taylorella 5 1
Telmatocola 1
Telmatospirillum 19 25
Temperatibacter 1
Tenacibaculum 3 38
Tenuibacillus 8
Tepidamorphus 1
Tepidanaerobacter 10 159
Tepidibacillus 38
Tepidibacter 62 128
Tepidimicrobium 194 1 26
Tepidimonas 12 17 3
Tepidiphilus 1
Terasakiella 1
Terasakiispira 2
Teredinibacter 1 1
Terrabacter 1
Terracoccus 1
Terribacillus 16 1 4
Terriglobus 4 4
Terrimicrobium 3
Terrimonas 19
Terrisporobacter 634 483 6 6
Tessaracoccus 25 109 1
Tetragenococcus 2 59 256
Tetrasphaera 12 8
Texcoconibacillus 75
Thalassobius 3
Thalassococcus 3
Thalassolituus 1
Thalassomonas 8
Thalassospira 384 6 103
Thalassotalea 50 1
Thauera 48 62
Thermacetogenium 9 4
Thermaerobacter 23 4
Thermanaeromonas 1 3
Thermanaerothrix Gregoire et al. 2011 1
Thermanaerovibrio 2 1
Thermasporomyces 13
Thermicanus 1 288 345
Thermincola 1 17 3
Thermoactinomyces 135 11
Thermoanaerobacter 17 118
Thermoanaerobacterium 3 63
Thermoanaerobaculum 47
Thermobacillus 7 13
Thermobaculum 57 81
Thermobifida 1
Thermobispora 8 1
Thermoclostridium 126 223
Thermococcus 1
Thermocrinis 4 1
Thermodesulfatator 1 54
Thermodesulfobacterium 1
Thermodesulfobium 9 2 1
Thermodesulforhabdus 20
Thermodesulfovibrio 9 62
Thermoflexibacter 70
Thermogemmatispora 5 31
Thermogutta 16 1
Thermogymnomonas 13
Thermohalobacter 11
Thermohydrogenium 18
Thermoleophilum 24
Thermolithobacter 33
Thermolongibacillus 33
Thermomarinilinea 15
Thermomicrobium 1
Thermomonas 5 3 3
Thermomonospora 1 3
Thermonema 14
Thermophagus 40
Thermopolyspora 2
Thermosediminibacter 12 1
Thermosinus 1
Thermosipho 1
Thermosporothrix 2
Thermostaphylospora 2
Thermosulfidibacter 2
Thermosynechococcus 1
Thermosyntropha 3
Thermotoga 1
Thermotomaculum 7
Thermovenabulum 20 39
Thermovibrio 1
Thermovirga 3
Thermovorax 1
Thermus 23 64
Theromyzon 1
Thioalbus 1
Thioalkalicoccus 5
Thioalkalispira 6
Thioalkalivibrio 21 67
Thiobacillus 1 27 65
Thiobacter 2
Thiocapsa 46 129
Thioclava 1 1
Thiococcus 1
Thiocystis 27 4
Thiofaba 1
Thiofilum 2