Bacteria reported by various 16s providers

Please note that a provider may report on a rare bacteria but it has not been seen in uploads yet.

Critical Reading to understand the differences The Taxonomy Nightmare

clade

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Bilateria 13 8 1 70
Eumetazoa 13 8 1 74

class

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Protostomia 13 8 1 68
Acidimicrobiia 5 148 42
Acidithiobacillia 21 1
Acidobacteria subdivision 23 40
Acidobacteria subdivision 6 1
Acidobacteriia 854 247 38 381
Aconoidasida 1
Actinopteri 1
Agaricomycetes 1
Alphaproteobacteria 485 459 34 304
Amphibia 1 3
Anaerolineae 12 85 143
Anthozoa 1 8
Aquificae 19 7
Arachnida 1
Archaeoglobea 1
Ardenticatenia 10 1
Armatimonadia 1
Arthoniomycetes 1
Aves 1
Babeliae 3
Bacilli 855 479 39 336
Bacteroidia 857 479 39 338
Balneolia 265 7 31
Betaproteobacteria 812 476 39 336
Bivalvia 1
Blastocatellia 3 71 3
Brocadiae 8
Bryopsida 1
Caldilineae 1 128 118
Caldisericia 1 2
candidate division Termite Group 3 2
Cestoda 1
Chitinispirillia 7
Chitinophagia 9 366 164
Chlamydiia 58 36
Chlorobia 1 34 259
Chloroflexia 3 41 14 1
Chlorophyceae 1
Chromadorea 1
Chrysiogenetes 12 82
Chthonomonadetes 33 3
Clitellata 1
Clostridia 858 479 39 338
Coprothermobacteria 7 23 4
Coriobacteriia 844 477 39 322
Cytophagia 10 399 13 284
Dacrymycetes 1
Deferribacteres 1 51 103
Dehalococcoidia 1 98 59
Deinococci 11 109 13 214
Deltaproteobacteria 689 461 36 326
Diaporthales 1
Dictyoglomia 35 1
Dothideomycetes 1
Echinoidea 1
Ellioviricetes 1
Elusimicrobia 7 51 20 6
Endomicrobia 1
Enopla 1
Epsilonproteobacteria 300 241 10 188
Erysipelotrichia 838 478 39 333
Eurotiomycetes 1
Fibrobacteria 206 97 35
Fimbriimonadia 17 2
Flavobacteriia 507 293 13 269
Florideophyceae 10
Fusobacteria 171 265 8 168
Gammaproteobacteria 787 479 39 335
Gastropoda 1 25
Gemmatimonadetes 2 34 16 3
Gloeobacteria 8 1
Halobacteria 1
Hemiascomycetes 1
Heterobasidiomycetes 1 13
Hexanauplia 1
Holophagae 221 130
Hydrogenophilalia 6 101 132
Ignavibacteria 2 325 16 36
Insecta 13 8 1 49
Insthoviricetes 1
Ktedonobacteria 6 20
Lecanoromycetes 1
Lentisphaeria 303 166 8 7
Liliopsida 1
Limnochordia 2 1
Malasseziomycetes 2
Mammalia 1
Mandibulata 13 8 1 49
Merostomata 1
Methanobacteria 232 131 19 102
Methanomicrobia 20 2 2
Methylacidiphilae 6
Microbotryomycetes 1
Mollicutes 182 410 28 302
Negativicutes 859 478 37 322
Nitriliruptoria 22 161
Nitrososphaeria 1 1
Nitrospinia 2
Nitrospira 2 25 51
Oligoflexia 2 36 11
Oligosphaeria 1 16
Opitutae 108 203 1 195
Pedosphaera 1
Pentapetalae 21 11 2 99
Pezizomycetes 1
Phaeophyceae 1
Phycisphaerae 2 4
Pilidiophora 1
Planctomycetia 3 48 10
Polychaeta 1
Polyplacophora 1
Polypodiopsida 1
Protoarchaea 2
Rhabditophora 1
Rhodothermia 4
Rhynchonellata 1
Rubrobacteria 2 44 6
Saprospiria 82 26
Solibacteres 1 7
Spartobacteria 27 17
Sphingobacteriia 22 293 28 312
Spirochaetia 28 72 159
Synergistia 252 184 1 230
Taphrinomycetes 1
Thermodesulfobacteria 14 49
Thermoleophilia 2 44 8
Thermolithobacteria 21
Thermomicrobia 1 7 1
Thermoplasmata 46 22
Thermoprotei 1 8
Thermotogae 11 31
Tissierellia 561 460 17 319
Trematoda 1
unclassified alpha proteobacteria 3 3
unclassified epsilon proteobacteria 5 3
Ustilaginomycetes 1
Verrucomicrobiae 524 419 28 283

cohort

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zetaproteobacteria 1 13 1
Endopterygota 1 3
Euteleosteomorpha 1
hemipteroid assemblage 13 4 41
Orthopteroidea 8 1 8

family

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Otomorpha 1
Acanthopleuribacteraceae 25
Acaryochloridaceae 2
Acetobacteraceae 7 136 1 112
Acholeplasmataceae 18 304 17 287
Acidaminococcaceae 601 430 23 298
Acidiferrobacteraceae 7 4
Acidimicrobiaceae 143 42
Acidithiobacillaceae 21 1
Acidobacteriaceae 99 82 60
Acidothermaceae 24 1
Actinomycetaceae 694 435 27 270
Actinopolysporaceae 70 81
Adenoviridae 1
Adoxaceae 1
Aerococcaceae 94 380 155
Aeromonadaceae 11 116 5 99
Agathiphagidae 1
Akkermansiaceae 521 411 28 269
Alcaligenaceae 12 92 10 306
Alcanivoracaceae 13 46
Alcidae 1
Algiphilaceae 16
Alicyclobacillaceae 167 8 5
Alteromonadaceae 223 110
Amanitaceae 1
Amaryllidaceae 1
Ambystomatidae 1
Ammodytidae 1
Amoebophilaceae 263
Anaerolineaceae 10 84 47
Anaeromyxobacteraceae 279 2
Anaeroplasmataceae 129 183 3 25
anamorphic Clavicipitaceae 1
anamorphic Mycosphaerellaceae 1
anamorphic Ustilaginaceae 1
Anaplasmataceae 20 104
Aphanizomenonaceae 1 209
Aphanothecaceae 2 1
Apiaceae 1
Aplysiidae 1
Aquificaceae 4 6
Araceae 1
Archaeoglobaceae 1
Archangiaceae 32 9
Ardenticatenaceae 10 1
Armatimonadaceae 1
Arthoniaceae 1
Ascarididae 1
Aspergillaceae 1
Asteraceae 1
Atopobiaceae 185 291 12 118
Aurantimonadaceae 1 2 4
Azonexaceae 7 43
Babeliaceae 3
Bacillaceae 257 372 34 296
Bacillales Family X. Incertae Sedis 1 232 303
Bacillidae 5 1 8
Bacteriovoracaceae 2 14 5
Bacteroidaceae 839 478 38 338
Baicaliidae 1
Balneatrichaceae 6
Balneolaceae 261 1 32
bandicoots 1
bark crevice scale insects 13 2
Barnesiellaceae 548 428 13 25
Bartonellaceae 3 20
Bathydraconidae 1
Bdellovibrionaceae 1 4
Beijerinckiaceae 1 6 16
Bernardetiaceae 52 1
Beutenbergiaceae 1 1
Bifidobacteriaceae 673 472 28 326
Bionectriaceae 1
Blastocatellaceae 3 14
Blastocystidae 2
Blattabacteriaceae 4
Bogoriellaceae 17 4
Borreliaceae 3 15
Bovidae 1
Brachycladiidae 1
Brachyspiraceae 14 26
Braconidae 1
Bradymonadaceae 1
Bradyrhizobiaceae 17 31 22
Brassicaceae 1
Brevibacteriaceae 71 53 30
Brevinemataceae 2
Brucellaceae 29 26 4 34
Bryobacteraceae 8
Budviciaceae 145 4
Burkholderiaceae 42 141 18 275
Burseraceae 1
Cabombaceae 1
Caedimonadaceae 1
Calanidae 1
Caldicoprobacteraceae 254 7
Caldilineaceae 1 126 123
Caldisericaceae 1 1
Calditrichaceae 1 69
Caliciviridae 1
Campanulaceae 1
Campylobacteraceae 299 204 7 143
Candidatus Brocadiaceae 8
Candidatus Desulfofervidaceae 1
Candidatus Midichloriaceae 1 1
Candidatus Nanopelagicaceae 1 3
Candidatus Paracaedibacteraceae 1
Carabidae 1
Cardiobacteriaceae 10 79 9
Carnobacteriaceae 369 240 5 214
Caryophyllaceae 1
Catabacteriaceae 107 87 1 1
Catalimonadaceae 31
Catenulisporaceae 1 4
Caulobacteraceae 17 60 148
Cebidae 1
Celerinatantimonadaceae 6
Cellulomonadaceae 31 23
Cellvibrionaceae 33 5
Centrarchidae 1
Cercopithecidae 1
Cervidae 1
Chamaesiphonaceae 4 3
Chaoboridae 1
Chelatococcaceae 2 2 1
Chelidae 1
Chenopodiaceae 1
Chitinispirillaceae 7
Chitinivibrionaceae 2
Chitinophagaceae 9 366 170
Chlamydiaceae 1 2
Chlamydomonadaceae 1
Chlorobiaceae 34 259
Chlorococcaceae 1
Chloroflexaceae 2 1
Chlorogloeopsidaceae 7
Chordaceae 1
Chordariaceae 1
Christensenellaceae 138 66 25 25
Chromatiaceae 5 255 1 265
Chromobacteriaceae 54 37
Chroococcaceae 111
Chroococcidiopsidaceae 2 1
Chrysiogenaceae 12 84
Chrysomelidae 1
Chrysopidae 1
Chthoniobacteraceae 4 17
Chthonomonadaceae 33 3
Cichlidae 1
Clostridiaceae 843 478 39 333
Clostridiales Family XI. Incertae Sedis 232
Clostridiales Family XII. Incertae Sedis 18 266 98
Clostridiales Family XIII. Incertae Sedis 709 442 33 265
Clostridiales Family XVI. Incertae Sedis 12 182
Clostridiales Family XVII. Incertae Sedis 35 18
Clostridiales incertae sedis 748 451 33 286
Coccidae 32
Cochlospermaceae 1
Coelosphaeriaceae 8
Cohaesibacteraceae 1 1
Colchicaceae 1
Coleofasciculaceae 4
Colwelliaceae 94 4
Comamonadaceae 130 84 3 273
Competibacteraceae 80
Conexibacteraceae 1 6 2
Coprothermobacteraceae 7 23 4
Corbulidae 1
Coriobacteriaceae 830 429 36 331
Cortinariaceae 1
Corynebacteriaceae 498 290 10 180
Cottidae 1
Coxiellaceae 2 25 10
Criblamydiaceae 23
Cricetidae 1
Crocinitomicaceae 22 3 1
crown conchs 1
Cryomorphaceae 1 53 1
Cryptococcaceae 13
Cryptomonadaceae 1
Culicidae 1
Cuniculitremaceae 1
Curculionidae 1
Cyanobacteriaceae 22 45
Cyanothecaceae 1
Cyclobacteriaceae 129 4
Cyprinidae 1
Cytophagaceae 6 328 4 283
Dacrymycetaceae 1
Dactylopteridae 1
Dasypodidae 1
Deferribacteraceae 1 51 110
Defluviitaleaceae 20 116 3
Dehalococcoidaceae 20 55
Deinococcaceae 10 54 1 160
Delphinidae 1
Demequinaceae 24 1
Dendrocolaptidae 1
Dermabacteraceae 70 39 56
Dermacoccaceae 7 12 6
Dermatophilaceae 1 5 1
Dermocarpellaceae 1
Desulfarculaceae 119 1
Desulfobacteraceae 2 285 2 72
Desulfobulbaceae 48 1 5
Desulfohalobiaceae 23 97
Desulfomicrobiaceae 115 24
Desulfonatronaceae 23 97
Desulfovibrionaceae 687 436 34 315
Desulfurellaceae 4 6
Desulfurobacteriaceae 5 1
Desulfurococcaceae 1
Desulfuromonadaceae 56 161
Diapheromeridae 2
Dictyoglomaceae 35 1
Dictyosteliaceae 1
Dientamoebidae Grasse, 1953 1
Dietziaceae 4 67 22
Dipsadidae 1
Drosophilidae 1
Dunaliellaceae 1
Dysgonamonadaceae 49 299 4 252
Echinidae 1
Echinometridae 1
Ectothiorhodospiraceae 1 110 225
Edwardsiidae 8
Eggerthellaceae 824 466 38 318
Egibacteraceae 1
Egicoccaceae 1
Elassomatidae 1
Elusimicrobiaceae 7 31 6
Emcibacteraceae 57
Emplectonematidae 1
Enchytraeidae 1
Endomicrobiaceae 1
Endozoicomonadaceae 1 1
Enterobacteriaceae 642 325 35 316
Enterococcaceae 158 129 30 297
Entomoplasmataceae 33 149
Eremolepidaceae 1
Ericaceae 1
Erinaceidae 1
Erwiniaceae 190 132 4 98
Erysipelotrichaceae 838 478 39 332
Erythrobacteraceae 3 15 50
Estrildidae 1
Eubacteriaceae 324 478 39 328
Euglenaceae 1
Euphorbiaceae 1
Euzebyaceae 17 161
Fabaceae 11 2 99
Fastidiosibacteraceae 18
Faucheaceae 10
Ferrimonadaceae 26 4
Ferrovaceae Johnson et al. 2014 1
Fervidobacteriaceae 11
Fibrobacteraceae 155 91 35
Fimbriimonadaceae 17 2
Flammeovirgaceae 1 181 90
Flavobacteriaceae 503 259 3 269
Fortieaceae 5
Francisellaceae 2 49 19
Frankiaceae 3 4
Fusobacteriaceae 142 224 8 141
Gadidae 1
Gaiellaceae 2 24
Galagidae 1
Gallionellaceae 18 35
Geminicoccaceae 2 20
Gemmataceae 1 6 5
Gemmatimonadaceae 1 17 3
Gentianaceae 1
Geobacteraceae 25 22
Geodermatophilaceae 3 62 6
Geomyidae 1
Glareolidae 1
Gloeobacteraceae 8 1
Glossiphoniidae 1
Glyceridae 1
Glycomycetaceae 68 24
Gnetaceae 1
Gobiidae 1
Gomontiellaceae 45 1
Gomphaceae 1
Gomphosphaeriaceae 10
Gordoniaceae 4 40 10
Gottschalkiaceae 62 4
Gracilibacteraceae 8 217 4
Granulosicoccaceae 37 1
Haematopodidae 1
Haemodoraceae 1
Hafniaceae 14 29 2 12
Hahellaceae 85 33
Halanaerobiaceae 1 93 50
Halieaceae 1 40 1
Haliscomenobacteraceae 48 3
Halobacteriaceae 1
Halobacteriovoraceae 22 7
Halobacteroidaceae 156 28
Haloferacaceae 1
Halomonadaceae 1 238 2 119
Haloplasmataceae 1 9
Halothiobacillaceae 37 3
Hapalosiphonaceae 1
Harpacticidae 1
Helicobacteraceae 4 15 113
Heliobacteriaceae 85 4 153
Herpesviridae 1
Herpetosiphonaceae 4
Heteroleibleiniaceae 6
Holophagaceae 200 130
Holosporaceae 3
Hungateiclostridiaceae 155 476 38 301
Hyacinthaceae 1
Hydrocharitaceae 1
Hydrogenophilaceae 5 101 135
Hydrogenothermaceae 8 1
Hyellaceae 1
Hymenobacteraceae 4 79 215
Hyphomicrobiaceae 4 61 152
Hyphomonadaceae 1 259 38
Hypoxidaceae 1
Iamiaceae 3 11
Ichneumonidae 1
Ichthyobacteriaceae 1
Ictaluridae 1
Idiomarinaceae 17 21
Ignavibacteriaceae 1 23 33
Ilumatobacteraceae 39
Immundisolibacteraceae 3
Intrasporangiaceae 3 27 17
Ischnochitonidae 1
Isosphaeraceae 2 5 6
Ixodidae 1
Jiangellaceae 3 7
Jonesiaceae 40 4
Kallotenuaceae 10
Kangiellaceae 22 1
Kiloniellaceae 25 3 69
Kineosporiaceae 1 23 9
Kofleriaceae 1 16 24
Kordiimonadaceae 59
Kosmotogaceae 1 11
Labilitrichaceae 27
Lachnospiraceae 854 478 39 338
Lactobacillaceae 828 463 30 308
Lampyridae 1
Lanariaceae 1
Laqueidae 1
Lecanoraceae 1
Lecythidaceae 1
Legionellaceae 1 25 200
Lentisphaeraceae 3
Leptolyngbyaceae 2 2 79
Leptospiraceae 17 126
Leptotrichiaceae 53 83 50
Leuconostocaceae 114 433 10 248
Lewinellaceae 7 22
Limnochordaceae 2 1
Limulidae 1
Listeriaceae 1 134 224
Litoricolaceae 22 8
Lonchitidaceae 1
Lorisidae 1
lotus family 1
Lucinidae 1
Macropodidae 1
Magnetococcaceae 9 1
Malasseziaceae 2
Marinifilaceae 114 4
Marinilabiliaceae 1 258 8 1
Mariprofundaceae 1 13 1
mealybugs 3 11
Melioribacteraceae 319 16 4
Merismopediaceae 3
Meruliaceae 1
Mesoaciditogaceae 4
Methanobacteriaceae 232 126 5 102
Methanocorpusculaceae 1 1 2
Methanomassiliicoccaceae 41 22
Methanomethylophilaceae 23
Methanoregulaceae 1
Methanosarcinaceae 1
Methylacidiphilaceae 6
Methylobacteriaceae 9 38 31
Methylococcaceae 1 86 6
Methylocystaceae 1 10 7
Methylophilaceae 125 147
Methylothermaceae 21
Microbacteriaceae 68 259 136
Microbulbiferaceae 7
Micrococcaceae 179 232 27 149
Microcoleaceae 1 144 67
Microcystaceae 1 4
Micromonosporaceae 2 104 103
Micropepsaceae 10
Microscillaceae 52 1
Microthrixaceae 1
mitosporic Nectriaceae 1
mitosporic Venturiaceae 1
Mniaceae 1
moles, shrew-moles, and desmans 1
Monimiaceae 1
Mooreiaceae 4
Moraceae 1
Moraxellaceae 40 224 9 175
Morganellaceae 20 240 18 51
Moritellaceae 1 1
Mrakiaceae 1
Muribaculaceae 4
Mustelidae 1
Mycobacteriaceae 76 45 82
Mycoplasmataceae 17 311 6 256
Mytilidae 1
Myxococcaceae 2 4
Mzabimycetaceae 64
Nakamurellaceae 2 4
Nannocystaceae 13 14
Natranaerobiaceae 17 1
Nautiliaceae 12 2
Neisseriaceae 89 108 12 105
Nereididae 1
nightshade family 13 1
Nitriliruptoraceae 5 2
Nitrosomonadaceae 8 152 5 6
Nitrosopumilaceae 1
Nitrososphaeraceae 1 1
Nitrospinaceae 2
Nitrospiraceae 2 25 51
Nocardiaceae 24 6 38
Nocardioidaceae 4 178 54
Nocardiopsaceae 149 6
noctuid moths 1
Nostocaceae 2 2 267
Nothobranchiidae 1
Nototheniidae 1
Numididae 1
Nymphalidae 1
Oceanospirillaceae 128 76
Odontophoridae 1
Odoribacteraceae 656 449 35 311
Oleiphilaceae 3
Oligosphaeraceae 16
Onagraceae 1
Ophiostomataceae 1
Opitutaceae 1 27 5
Orbaceae 3 4
Orchidaceae 1
Orthomyxoviridae 1
Oscillatoriaceae 49 157
Oscillospiraceae 795 472 38 15
Oxalobacteraceae 281 232 26 210
Paenibacillaceae 3 406 32 260
Paludibacteraceae 1 49 3 8
Papilionidae 1
Papillomaviridae 1
Parachlamydiaceae 2 2
Paridae 1
Parvularculaceae 6 1
Pasteurellaceae 595 404 31 269
Pasteuriaceae 12
Patulibacteraceae 2 1 1
Pectobacteriaceae 3 200 1 20
Pelagibacteraceae 4 1
Peptococcaceae 560 444 26 312
Peptoniphilaceae 554 449 9 300
Peptostreptococcaceae 850 478 33 308
Peribunyaviridae 1
Persicobacteraceae 43 5
Petromyzontidae 1
Petrotogaceae 2 8
Pezizaceae 1
Phaffomycetaceae 1
Phasianidae 1
Phycisphaeraceae 2 1
Phyllobacteriaceae 40 16 10
Picornaviridae 1
Piscirickettsiaceae 2 141 52
Pitheciidae 1
Planctomycetaceae 2 42 5
Planoceridae 1
Planococcaceae 42 391 24 147
Plasmodiidae 1
Platanaceae 1
Pleosporaceae 1
Pleuronectidae 1
Poaceae 1
Polyangiaceae 2 3 20
Polygonaceae 1
Porphyromonadaceae 574 470 38 324
Porticoccaceae 1
Poxviridae 1
Prevotellaceae 628 478 24 321
Prochloraceae 2 5
Prochlorococcaceae 1
Prochlorotrichaceae 3 3
Prolixibacteraceae 64 1
Promicromonosporaceae 18 9
Propionibacteriaceae 143 191 15 32
Prorhynchidae 1
Proteidae 3
Proteinivoraceae 223 232
Psathyrellaceae 1
Pseudanabaenaceae 2 97
Pseudoalteromonadaceae 24 15
Pseudomonadaceae 71 207 11 82
Pseudonocardiaceae 1 131 119
Psychromonadaceae 18 9
Psyllidae 1
Pteromalidae 1
Puniceicoccaceae 7 197 192
Pyrenomonadaceae 1
Pyrodictiaceae 1
Pythonidae 1
Pyxicephalidae 1
Rallidae 1
Ranunculaceae 1
Rarobacteraceae 35
Retroviridae 1
Rhabdochlamydiaceae 33
Rhizobiaceae 18 55 15 99
Rhodanobacteraceae 1 91 203
Rhodobacteraceae 12 129 4 86
Rhodobiaceae 3 4 4
Rhodocyclaceae 77 195 201
Rhodospirillaceae 405 364 26 251
Rhodothalassiaceae 11 7
Rhodothermaceae 71 6 277
Rickettsiaceae 121 191
Rikenellaceae 780 472 38 44
Rivulariaceae 45 164
Rosaceae 1
Roseiarcaceae 3
Roseiflexaceae 1 9 1
rove beetles 3
Rubiaceae 1
Rubricoccaceae 3
Rubritaleaceae 79 99
Rubrobacteraceae 1 23 6
Ruminococcaceae 845 478 39 338
Saccharospirillaceae 178 8
Salicaceae 1
Salinibacteraceae 1
Salinisphaeraceae 12 1
Salinivirgaceae 1
Sandaracinaceae 5 1
Sanguibacteraceae 2 1
Sapindaceae 1
Saprospiraceae 27 23
Sarcoscyphaceae 1
Schleiferiaceae 8
Scincidae 1
Sciuridae 1
Scrophulariaceae 1
Scytonemataceae 1 4
Sedimentisphaeraceae 3
Segniliparaceae 17 1
Selenomonadaceae 117 270 14 289
Shewanellaceae 71 198
Simkaniaceae 7 1
Simmondsiaceae 1
Sinobacteraceae 3 58 228
Sironidae 1
Sneathiellaceae 4
Solibacteraceae 1 1
Solirubrobacteraceae 1 10 5
Soricidae 1
Sphaerobacteraceae 6
Spheniscidae 1
Sphingobacteriaceae 8 293 26 312
Sphingomonadaceae 29 258 14 81
Spirillaceae 1 14
Spirochaetaceae 1 44 84
Spiroplasmataceae 183 4
Spirulinaceae 4
Spongiibacteraceae 99 1
Sporichthyaceae 7 2
Sporidiobolaceae 1
Sporolactobacillaceae 72 72
Sporomusaceae 37 296 222
Staphylococcaceae 234 154 3 257
Stereaceae 1
Sternoptychidae 1
Sterolibacteriaceae 12 44 47
Stichodactylidae 1
Stomiidae 1
Streptococcaceae 843 476 39 331
Streptomycetaceae 94 2 93
Streptosporangiaceae 77 117
Succinivibrionaceae 16 128 78
Sulfolobaceae 7
Sutterellaceae 759 474 39 320
Symbiobacteriaceae 126 187
Synechococcaceae 1 7 97
Synergistaceae 252 184 1 230
Syntrophaceae 34 65
Syntrophobacteraceae 182 136
Syntrophomonadaceae 12 208 256
Syntrophorhabdaceae 1 16
Taeniidae 1
Tannerellaceae 771 471 37 324
Taphrinaceae 1
Temperatibacteraceae 1
Tenrecidae 1
Tephritidae 1
Termitidae 1
Tetranychidae 1
Theaceae 1
Thermaceae 1 38 151
Thermoactinomycetaceae 1 229 176
Thermoanaerobacteraceae 229 147 267
Thermoanaerobacterales Family III. Incertae Sedis 75 1 293
Thermoanaerobacterales Family IV. Incertae Sedis 9
Thermoanaerobaculaceae 40
Thermococcaceae 2
Thermodesulfobacteriaceae 14 49
Thermodesulfobiaceae 16 28 6 5
Thermogemmatisporaceae 5 20
Thermoleophilaceae 19
Thermolithobacteraceae 21
Thermomicrobiaceae 1
Thermomonosporaceae 38 96
Thermonemataceae 13
Thermoproteaceae 1
Thermosporotrichaceae 2
Thermotogaceae 1 31
Thermotomaculaceae 5
Thioalkalibacteraceae 1 2
Thioalkalispiraceae 1 33 3
Thiobacillaceae 5 21 39
Thiofilaceae 2
Thiolinaceae 2
Thioprofundaceae 5
Thiotrichaceae 1 50 209
Thorselliaceae 35
Thraupidae 1
Tischeriidae 1
Tissierellaceae 1 146 10
Togaviridae 1
Trichechidae 1
Trichocoleaceae Mai et Johansen (2018) nom. illegit. 2
Trionychidae 1
Trueperaceae 1 11
Trypanosomatidae 1
Tsukamurellaceae 1 2 35
unclassified Enterobacterales 1 7
unclassified Rhodospirillales 6 3
Veillonellaceae 811 473 35 330
Verrucomicrobia subdivision 3 4 1
Verrucomicrobiaceae 241 85 261
Vesicomyidae 1
Vespidae 1
Vibrionaceae 1 59 31
Vicinamibacteraceae 1
Victivallaceae 303 161 8 5
Viviparidae 25
Waddliaceae 2
Wenzhouxiangellaceae 19 1
Woeseiaceae 1
Xanthobacteraceae 2 9 8
Xanthomonadaceae 35 153 259
Yersiniaceae 27 80 7 222
Ziphiidae 1

genus

NameuBiomeThryveSequentiaBioTechXenoGeneOthers
Zoogloeaceae 2 85 1 84
16SrXII (Stolbur group) 3
Abiotrophia 19 43 13
Absiella 198 211
Acanthopleuribacter 25
Acaryochloris 2
Acer 1
Acetanaerobacterium 131 235 1
Acetatifactor 2 439 1
Acetitomaculum 148 331 1
Acetivibrio 34 385 27
Acetoanaerobium 267 1
Acetobacter 12 5
Acetobacterium 192 300
Acetobacteroides 133
Acetohalobium 1 23
Acetomicrobium 17 2
Acetonema 112
Acholeplasma 7 304 1 226
Achromatium 2
Achromobacter 1 1 9 28
Acidaminobacter 134 88
Acidaminococcus 109 236 4 241
Acidianus 1
Acidibacter 23
Acidicaldus 1
Acidicapsa 36
Acidiferrobacter 4 3
Acidihalobacter 1
Acidimicrobium 37
Acidiphilium 1 1 17
Acidipropionibacterium 2 4
Acidisphaera 1
Aciditerrimonas 52
Acidithiobacillus 21 1
Acidobacterium 4
Acidocella 1
Acidothermus 24 1
Acidovorax 8 16 30
Acinetobacter 33 121 8 68
Acizzia 1
Acrocarpospora 3
Actimicrobium 2
Actinoallomurus 1
Actinoalloteichus 4
Actinobacillus 105 104 8 181
Actinobaculum 20 5 33
Actinocatenispora 44 82
Actinocorallia 4 1
Actinokineospora 1
Actinomadura 19 30
Actinomyces 638 391 11 248
Actinomycetospora 2 2
Actinoplanes 54 10
Actinopolymorpha 24
Actinopolyspora 67 81
Actinosynnema 1
Actinotignum 32 46 6
Adenophora 1
Adhaeribacter 11
Adlercreutzia 569 3 238
Advenella 6 3
Aequorivita 7 2 2
Aeribacillus 24 1
Aeriscardovia 73
Aerococcus 19 116 13
Aeromicrobium 2 3 5
Aeromonas 11 81 5 5
Aerosphaera 52
Aestuariispira 203 2
Afipia 1 3
Agaribacter 155
Agarilytica 1
Agarivorans 3 1
Agathiphaga 1
Agathobacter 1
Agathobaculum 1 449 9 5
Aggregatibacter 191 83 2 98
Agmenellum 1
Agreia 1
Agrobacterium 1 13
Agrococcus 3 1 8
Agromyces 32 61
Ahniella 1
Akkermansia 519 411 28 279
Akodon 1
Albidovulum 4
Albimonas 2
Alcaligenes 2 7 3
Alcalilimnicola 1
Alcanivorax 5 46
Algibacter 3 1
Algicola 22
Algimonas 5
Algiphilus 16
Algivirga 1
Algorimarina 1
Algoriphagus 52 3
Alicycliphilus 1 1 5
Alicyclobacillus 49 4 4
Aliiarcobacter 1
Aliidiomarina 11
Aliifodinibius 102
Aliihoeflea 1
Aliivibrio 1
Alishewanella 30 52
Alistipes Rautio et al. 2003 780 472 35 26
Alkalibacillus 2 26
Alkalibacter 47
Alkalibacterium 5 1 131
Alkalibaculum 95
Alkaliflexus 19 1
Alkalimarinus 6
Alkaliphilus 148 4 301
Alkalispirillum 1
Alkalispirochaeta 1
Alkalitalea 1
Alkanibacter 1
Alkanindiges 1 3
Allisonella 77 75 4
Allium 1
Alloactinosynnema 4
Allobaculum 9 60 32
Allocatelliglobosispora 1
Allochromatium 18
Allofrancisella 5 1
Allofustis 2 4
Allohahella 36 27
Alloiococcus 3 36 2
Allokutzneria 1 1
Alloprevotella 96 206 2 3
Alloscardovia 27 56 29
Alocasia 1
Alphainfluenzavirus 1
Alphavirus 1
Alsobacter 1
Altererythrobacter 3 6 4
Alteribacillus 1
Alternaria 1
Alterococcus 14
Alteromonas 12 4
Altibacter 1
Alysiella 2 2
Amanita 1
Amaricoccus 1 1 14
Amblyomma 1
Ambystoma 1
Ameyamaea 3
Aminicella 220
Aminiphilus 1 35
Aminipila 4
Aminivibrio 16
Aminobacter 1 5
Aminobacterium 8 12
Aminomonas 25 4
Ammonifex 5 104
Ammoniphilus 11 15
Amnibacterium 1
Amphibacillus 13 4
Amphritea 2 8
Amycolatopsis 3 10
Amylibacter 3
Anabaenopsis 1
Anaerobacillus 25 1 91
Anaerobacter 65
Anaerobacterium 49 17 4
Anaerobiospirillum 12
Anaerobium 144 20
Anaerobranca 216 242
Anaerobutyricum 1 446 33 12
Anaerocella 71
Anaerococcus 410 287 6 145
Anaerocolumna 383 8
Anaerofilum 262 233 8 300
Anaerofustis 213 286 76
Anaeroglobus 22 256
Anaerolinea 4 18 19
Anaeromassilibacillus 10
Anaeromusa 5 61
Anaeromyxobacter 279 2
Anaerophaga 4
Anaeroplasma 49 90 1 23
Anaerorhabdus 7
Anaerosalibacter 109
Anaerosinus 37 8
Anaerosphaera 41
Anaerospora 78
Anaerosporobacter 590 286 6
Anaerostipes 828 478 39 298
Anaerotaenia 3
Anaerotignum 441 22 5
Anaerotruncus 775 399 31 302
Anaerovibrio 9 4 1 272
Anaerovorax 286 20 14
Anaplasma 8 1
Anderseniella 4
Andreprevotia 1
Andropogon 1
Aneurinibacillus 1 34 3
Angelakisella 23
Annandia 2
Anopheles 1
Anoxybacillus 4 16 29
Anoxybacter 4
Anoxynatronum 300
Antarctobacter 1
Anthracocystis 1
aphid P-endosymbionts 1 1 4
Apibacter 1
Aplysia 1
Aquabacterium 5 14 2
Aquamicrobium 4
Aquaspirillum 10
Aquibacter 1 6
Aquicella 5
Aquiflexum 4 1
Aquihabitans 9
Aquimarina 7 7
Aquimonas 9 1
Aquincola 1
Aquipuribacter 1 3
Aquisalimonas 22
Aquisphaera 2
Aquitalea 3 7
Arabia 1 1
Arachidicoccus 3
Aramigus 1
Arcanobacterium 34 19 1 11
Archaeoglobus 1
Archangium 3 1
Arcicella 48
Arcobacter 2 4 24
Arcticibacterium 1
Arctostaphylos 1
Ardenticatena 10
Arenibacter 1 4
Arenimonas 18 1
Argyropelecus 1
Arhodomonas 8
Aridibacter 14
Armatimonas 1
Aromatoleum 1
Arsenicicoccus 1 1
Arsenophonus 24 7
Arthothelium 1
Arthrobacter 15 3 1 73
Arthronema 2
Arthrospira 1 1 7
Artocarpus 1
Arum 1
Arundinella 1
Asaccharobacter 11
Asaccharospora 104
Asaia 4 1
Asinibacterium 3
Asteroleplasma 74 119 1
Asticcacaulis 1 24 122
Atlantibacter 1
Atopobium 118 171 3 109
Atopococcus 11
Atopostipes 29
Aurantimicrobium 1
Aurantimonas 2
Auraticoccus 1 3
Aureibacter 4
Aureicoccus 1
Aureimonas 1 1
Aureispira 1
Aureitalea 3
Auricoccus 1
Auritidibacter 1
Austwickia 1
Avibacterium 31 36
Azoarcus 3 1 25
Azohydromonas 6
Azonexus 7
Azorhizobium 1 1
Azospira 12 2 1
Azospirillum 2 165 2 62
Azotomonas 1
Bacillus 81 213 1 225
Bacillus altitudinis complex 3
Bacteria 2
Bacterioplanes 1 1
Bacteriovorax 1 10 4
Bacteroides 839 478 38 338
Baia 37
Balneatrix 6
Balneola 96 32
Barnesiella 445 400 5 9
Barrientosiimonas 11
Bartonella 3 20
Basfia 3 1
Basilea 1
Batis 1
Bdellovibrio 1 4
Beduini 1
Beggiatoa 1 1
Beijerinckia 2
Belliella 13 3
Bellilinea 2
Belnapia 1 1
Bergeyella 15 5
Bernardetia 37 1
Betainfluenzavirus 1
Betapapillomavirus 1
Beutenbergia 1
Bibersteinia 1 2
Bifidobacterium 659 461 22 325
Bilophila 647 1 33 299
Biostraticola 15
Bisgaardia 36
Bittarella 8
Bizionia 2
Blancoa 1
Blastocatella 3
Blastochloris 3
Blastococcus 1 3
Blastocystis 2
Blastomonas 1
Blastopirellula 8
Blattabacterium 4
Blautia 842 478 39 338
Bogoriella 7
Bombiscardovia 1 3
Bordetella 30 4
Borrelia 3 15
Borreliella 4
Bosea 3 5 7
Bowmanella 32
Brachiaria 1
Brachybacterium 15 7 48
Brachymonas 1
Brachyspira 14 26
Bradymonas 1
Bradyrhizobium 12 1 16
Branchiibius 4
Brassicibacter 322 5
Brenneria 195 12
Breoghania 1
Brevefilum 1
Brevibacillus 50 1 28
Brevibacterium 71 53 30
Brevifollis 9
Brevinema 2
Brevundimonas 14 22 19
Brochothrix 6 204
Brockia 12
Brucella 2 1
Bryobacter 3
Bulleidia 5 31 1 57
Burkholderia 2 28 11 94
Burkholderia cepacia complex 7 1 5
Bursatella 1
Bursera 1
Buttiauxella 58 1 1
Butyricicoccus 79 280 37 7
Butyricimonas 483 420 31 262
Butyrivibrio 433 465 30 226
Bythopirellula 5
Caballeronia 11
Cabomba 1
Caedibacter 4
Caenispirillum 9
Caldalkalibacillus 63
Caldanaerobacter 1 46 20
Caldanaerobius 17
Caldanaerovirga 2
Caldicellulosiruptor 28 1 277
Caldicoprobacter 126 7
Caldilinea 4 123
Caldimicrobium 1 1
Caldimonas 10
Caldinitratiruptor 124
Caldisalinibacter 225
Caldisericum 1 1
Calditerrivibrio 4 1
Caldithrix 1 69
Callimico 1
Callithrix 1
Calochaete 5
Calolisianthus 1
Caloramator 1 315 10 294
Caloribacterium 5
Calothrix 45 151
Camarhynchus 1
Camelimonas 2
Camellia 1
Caminibacter 1
Caminicella 312 4
Campylobacter 297 201 7 127
Campylotropis 1
Candidatus Amoebophilus 263
Candidatus Aquiluna 1
Candidatus Arthromitus 4
Candidatus Atelocyanobacterium 1
Candidatus Azobacteroides 38
Candidatus Babela 2
Candidatus Blochmannia 86
Candidatus Cardinium 1
Candidatus Cloacimonas 1
Candidatus Contubernalis 33
Candidatus Endobugula 20
Candidatus Endolissoclinum 1
Candidatus Glomeribacter 137
Candidatus Gullanella 2
Candidatus Hepatoplasma 1
Candidatus Ishikawaella 1
Candidatus Izimaplasma 1
Candidatus Kinetoplastibacterium 4
Candidatus Koribacter 2
Candidatus Microthrix 1
Candidatus Midichloria 1
Candidatus Nitrosoglobus 1
Candidatus Nucleicultrix 1
Candidatus Pelagibacter 4 1
Candidatus Phlomobacter 7
Candidatus Phytoplasma 8 259
Candidatus Planktophila 1 2
Candidatus Portiera 1
Candidatus Protochlamydia 2
Candidatus Puniceispirillum 1
Candidatus Regiella 14
Candidatus Rhabdochlamydia 33
Candidatus Saccharimonas 20
Candidatus Scalindua 7
Candidatus Soleaferrea 541 4
Candidatus Solibacter 1
Candidatus Stoquefichus 127 1 1
Candidatus Sulcia 1 3
Candidatus Symbiobacter 1
Candidatus Tammella 143
Candidatus Vidania 1
Candidatus Walczuchella 1
Capnocytophaga 13 12 10
Caproiciproducens 1 31 4
Carboxydocella 12 182
Carboxydothermus 5 4
Carboxylicivirga 135 1
Carcinoscorpius 1
Cardiobacterium 10 67 8
Carnimonas 13
Carnobacterium 10 2 21
Carsonella 1
Casaltella 319 4
Cassena 1
Castellaniella 1
Catabacter 106 87 1
Catellicoccus 1 2
Catenibacterium 309 152 1 103
Catenisphaera 42 2
Catenovulum 1
Catenulispora 1 4
Catonella 11 456 17 261
Caulobacter 4 8 7
Cecembia 9
Cedecea 47
Celeribacter 3
Celerinatantimonas 6
Cellulomonas 31 13
Cellulophaga 4 4
Cellulosibacter 20
Cellulosilyticum 15 450 2 4
Cellulosimicrobium 3
Cellvibrio 13 4
Centipeda 19
Cerasicoccus 109 89
Cereibacter 1
Cesiribacter 18
Cetobacterium 4 17 16
Chamaesiphon 4 3
Chania 10 3
Chelativorans 4 1
Chelatococcus 2 1
Chelonobacter 1 9
Chiayiivirga 2
Chiropotes 1
Chishuiella 5
Chitinilyticum 2
Chitinimonas 12
Chitinispirillum 7
Chitinivibrio 2
Chitinolyticbacter 1
Chitinophaga 19 12
Chlamydia 1 2
Chloracidobacterium 9 3
Chlorobaculum 259
Chlorobium 1 1
Chlorococcum 1
Chloroflexus 1
Chlorogloeopsis 7
Chloroherpeton 10 4
Chloromonas 1
Chondrocystis 1
Chondromyces 2 16
Chordaria 1
Christensenella 137 62 17 13
Chromatium 3 93
Chromobacterium 7 26
Chromohalobacter 3
Chroococcidiopsis 2 1
Chroococcus 110
Chryseobacterium 11 34 40
Chryseolinea 8 4
Chryseomicrobium 11
Chrysopa 1
Chthoniobacter 4 17
Chthonomonas 33 3
Cichlasoma 1
Cintractia 1
Citreitalea 1
Citricoccus 1 1
Citromicrobium 3
Clarkia 1
Clavibacter 2 4
Cloacibacillus 116 70 19
Cloacibacterium 6 8 4
Clostridiisalibacter 5
Clostridioides 515 57 3 11
Clostridium 824 471 38 332
Cnuella 3
Cobetia 1
Cocleimonas 2
Coenonia 2
Cohaesibacter 1 1
Cohnella 30 136
Coleofasciculus 1
Colidextribacter 1 25
Colinus 1
Collimonas 15 5
Collinsella 815 411 34 271
Colwellia 17 4
Comamonas 31 23 22
Commensalibacter 2
Conchiformibius 1
Conexibacter 6 2
Confluentimicrobium 1
Congregibacter 3
coot 1
Coprinellus 1
Coprobacillus 171 231 5 304
Coprobacter 349 307 11 1
Coprococcus 2 478 33 331
Coprothermobacter 7 23 4
Coptodon 1
Coptothyris 1
Coraliomargarita 26 108
Corallibacter 1
Coriobacterium 9 2 51
Corticibacter 2
Cortinarius 1
Corynebacterium 497 284 9 180
Cottus 1
Coturnix 1
Couchioplanes 5 1
Couratari 1
Coxiella 12 1
Crambe 1
Cratogeomys 1
Craurococcus 2
Crepis 1
Criblamydia 23
Crinalium 1 1
Croceibacter 6 1
Croceicoccus 1
Cromidon 1
Cronobacter 88 34 4
Cronodrilus 1
Crossiella 1
Cruoricaptor 1 35
Cryobacterium 11 3 1
Cryomorpha 48
Cryptanaerobacter 1
Cryptobacterium 3 147 1
Cryptococcus 13
Cryptomonas 1
Cubophis 1
Cucumibacter 2
Culex 1
Culturomica 1
Cupriavidus 2 21 5
Curculigo 1
Curtobacterium 1 4
Curvibacter 10 3 17
Cutibacterium 50 6 8
Cyanobacterium 22 45
Cyanobium 1 3 1
Cyanothece 1
Cyclobacterium 22 4
Cycloclasticus 16 6
Cyclonatronum 3
Cygnodraco 1
Cylindrospermum 1
Cyphomandra 5 1
Cyphophthalmus 1
Cystobacter 17 9
Cytophaga 1 31 1
Dactylopterus 1
Dactylosporangium 3
Damaliscus 1
Danthonia 1
Dasania 11
Dasypus 1
Datura 1
Dechloromonas 46
Deefgea 3 1
Deferribacter 14 77
Deferrisoma 12
Defluviicoccus 5
Defluviimonas 3
Defluviitalea 2 93
Defluviitoga 1 1
Dehalobacter 110 5 4
Dehalobacterium 9 138
Dehalococcoides 20 3
Dehalogenimonas 80 58
Deinococcus 10 54 1 160
Delftia 81 5 9
Deltavirus 1
Demequina 23 1
Dendrosporobacter 30
Denitratisoma 1 6 34
Denitrobacter 1
Denitrobacterium 1 7 1
Denitrovibrio 3
Dermabacter 57 32 11
Dermacoccus 1 1 5
Dermatosorus 1
Derxia 16
Desemzia 91 1
Desertibacter 3
Desmospora 5
Desulfacinum 23
Desulfallas 15 1
Desulfarculus 76 1
Desulfatibacillum 1 1
Desulfatiferula 13
Desulfatiglans 4
Desulfatirhabdium 1
Desulfatitalea 5
Desulfitibacter 1 34 2
Desulfitispora 19
Desulfitobacterium 1 49 79
Desulfobacca 16 2
Desulfobacter 5 29
Desulfobacterium 139 1
Desulfobacula 3
Desulfobaculum 8
Desulfobotulus 3
Desulfobulbus 37 1
Desulfocapsa 1 1
Desulfocarbo 68
Desulfocella 1 151
Desulfococcus 3 4
Desulfocurvus 2
Desulfofaba 24
Desulfofarcimen 121 14
Desulfofrigus 18 28
Desulfofundulus 49 50
Desulfofustis 5
Desulfoglaeba 118
Desulfohalobium 3 3
Desulfohalotomaculum 325 36
Desulfohalovibrio 41
Desulfomicrobium 111 24
Desulfomonile 4 62
Desulfonatronobacter 3
Desulfonatronovibrio 4 71
Desulfonatronum 23 97
Desulfonauticus 6 31
Desulfonema 16
Desulfonispora 50
Desulfoplanes 8
Desulforegula 33
Desulforhabdus 1
Desulfosalsimonas 2
Desulfosarcina 13 20
Desulfosoma 66
Desulfosporosinus 1 112 1 156
Desulfotalea 1 2
Desulfothermus 4
Desulfotomaculum 2 372 10 176
Desulfovibrio 409 428 22 267
Desulfovirga 6
Desulfurella 2 6
Desulfuribacillus 3
Desulfurispira 2
Desulfurispirillum 84
Desulfurispora 263 139
Desulfurivibrio 2 1
Desulfurobacterium 4 1
Desulfurococcus 1
Desulfuromonas 32 13
Desulfuromusa 2 149
Dethiobacter 1 8 41
Dethiosulfatibacter 151
Dethiosulfovibrio 51 149
Devosia 1 35 120
Devriesea 1
Dialister 518 423 13 188
Diaphorobacter 1 3 1
Dichelobacter 2
Dichotomicrobium 5
Dickeya 9 1 12
Dictyoglomus 35 1
Dictyostelium 1
Dielma 332 273 9 4
Dientamoeba 1
Dietzia 3 67 22
Dinoroseobacter 1
Diplorickettsia 12
Diplosphaera 8
Dissulfuribacter 7
Dokdonella 8 134
Dokdonia 12 4
Dolichospermum 217
Dolosicoccus 2
Dolosigranulum 4 89
Dongia 96
Dorea 829 472 38 330
Doritaenopsis 1
Draconibacterium 9 1
Drimiopsis 1
Drosophila 1
Dubautia 1
Duganella 1 2
Duncaniella 4
Duodenibacillus 8 1
Dyadobacter 40 111
Dyella 2 2
Dysgonomonas 11 297 4 260
Echinicola 29 4
Echinometra 1
Echinops 1
Ectothiorhodosinus 3
Ectothiorhodospira 17 81
Edaphobacter 42
Edwardsiella 10 19
Effusibacillus 98
Eggerthella 608 365 25 258
Eggerthia 2 148
Egibacter 1
Egicoccus 1
Ehrlichia 9 101
Eikenella 11 4 1
Eionea 1
Eisenbergiella 545 353 25 2
Eisenibacter 52
Ekhidna 1
Elassoma 1
Elizabethkingia 21 6
Elodea 1
Elstera 3
Elusimicrobium 7 31 3
Emcibacter 57
Emergencia 1
Empedobacter 8 1
Emticicia 90 2 239
Enchytraeus 1
Endobacter 1
Endomicrobium 1
Endozoicomonas 1
Enhydrobacter 3
Enorma 81 51 3
Ensifer 1 11 1
Enterobacter 224 33 10 148
Enterococcus 152 88 29 265
Enterorhabdus 284 150 7 4
Enterovibrio 1
Enterovirus 1
Entomoplasma 12 11
Epibacterium 1
Epichloe 1
Epulopiscium 63 4 1
Ercella 126 1
Ereboglobus 3
Eremococcus 22 2
Erinaceus 1
Erwinia 1 92 1 100
Erysipelatoclostridium 802 476 36 11
Erysipelothrix 301 3 260
Erythrobacter 8 47
Escherichia 1 47 12 232
Ethanoligenens 390 160
Eubacterium 168 478 39 322
Eucorethra 1
Eudoraea 39
Eudyptes 1
Euglena 1
Euphorbia 1
Euryhalocaulis 7
Euzebya 17 161
Euzebyella 1
Exiguobacterium 17 8
Exserohilum 1
Extensimonas 1
Ezakiella 26 1
Fabibacter 6
Facklamia 56 346 47
Faecalibacterium 820 477 38 335
Faecalibaculum 1
Faecalicatena 301 22
Faecalicoccus 287 4 1
Faecalitalea 55 19 38
Falcatimonas 1 15
Falsiporphyromonas 128
Fangia 14
Fastidiosipila 82 36 2 3
Fenollaria 261 5 1
Fergusonia 1 6
Fermentimonas 4
Ferrimicrobium 2 7
Ferrimonas 26 4
Ferrithrix 79
Ferrovibrio 2
Ferrovum 1
Ferruginibacter 1 36
Fervidicella 4
Fervidobacterium 11
Fibrella 3
Fibrobacter 96 86 35
Fictibacillus 20 4
Ficus 1
Filifactor 2 153 19 100
Filimonas 1 4
Fimbriimonas 17 2
Finegoldia 473 353 6 160
Fischerella 1
Flammeovirga 22 90
Flavicella 4
Flaviflexus 10 3
Flavihumibacter 2
Flavisolibacter 1 1 12
Flavitalea 1 5
Flavivirga 1
Flavobacterium 429 23 16
Flavonifractor 816 457 33 13
Flectobacillus 44
Flexibacter 1 3 2
Flexistipes 31 1
Flexithrix 7
Flexivirga 1
Flintibacter 26
Fluoribacter 1
Fluviicola 14 3 1
Fluviimonas 177
Fodinibius 2
Fodinicurvata 201 1
Fontibacter 8
Fonticella 2 50
Formosa 5
Fournierella 1 16
Francisella 2 36 19
Franconibacter 5
Frankia 4
Fratercula 1
Frateuria 1 1
Fretibacter 14
Fretibacterium 104 1
Friedmanniella 14 7
Frigoribacterium 1 1
Frischella 1 3
Frondicola 1 1
Fructobacillus 18 20
Fuchsiella 4
Fucophilus 2
Fulvitalea 34
Fulvivirga 47
Fusarium fujikuroi species complex 1
Fusibacter 89 22
Fusicatenibacter 800 472 18 3
Fusobacterium 142 212 6 134
Gabonibacter 10
Gadus 1
Gaetbulibacter 1
Gaiella 2 24
Galago 1
Galenea 20
Gallaecimonas 3
Gallibacterium 1 15 8
Gallicola 76 30 1
Gallionella 15 35
Garciella 7
Gardnerella 44 50 2 18
Garritya 2
Gelria 228 1
Gemella 185 216 4 282
Geminicoccus 1 20
Geminocystis 1
Gemmata 1 4 5
Gemmatimonas 15 3
Gemmatirosa 2 1
Gemmiger 429 18
Gemmobacter 4
Gentiana 1
Geoalkalibacter 1
Geobacillus 6 24 12 117
Geobacter 20 22
Geodermatophilus 6 2
Geofilum 41
Geomicrobium 10
Geopsychrobacter 4
Georgenia 13 4
Geosporobacter 4
Geothermobacter 1
Geothrix 152 130
Geovibrio 1 13
Gibbsiella 4
Giesbergeria 1 2
Gilliamella 1
Gillichthys 1
Gillisia 14 174
Gilvimarinus 1
Gimesia 2
Glaciecola 39 62
Glaciimonas 2
Glaesserella 2 1
Gliocladium 1
Globicatella 2 13
Gloeobacter 8 1
Gloriosa 1
Glossogobius 1
Gluconacetobacter 6 2
Gluconobacter 2 37
Glutamicibacter 34 37
Glycera 1
Glycocaulis 1 1
Glycomyces 8 23
Gorbachella 1 1
Gordonia 4 39 10
Gordonibacter 482 253 26 8
Gottschalkia 62 4
Gracilibacillus 52
Gracilibacter 3 217 3
Gracilimonas 139
Gramella 3 50
Granulibacter 4
Granulicatella 363 39 141
Granulicella 7 13
Granulosicoccus 35 1
Gryllotalpicola 5 1
Guggenheimella 170
Guttera 1
Guyparkeria 1 2
Gymnocintractia 1
Gynuella 21 1
Haematobacter 3 3
Haematospirillum 2
Haemophilus 574 375 22 243
Hafnia 14 1 2 1
Hahella 85 33
Halanaerobacter 1 3
Halanaerobaculum 3
Halanaerobium 3 50
Halarsenatibacter 30
Haliangium 1 15 24
Haliea 1 6
Halioglobus 1 1
Haliscomenobacter 40 3
Halobacillus 18 4
Halobacteriovorax 22 7
Halobacteroides 3 1
Halocella 5 4
Halochromatium 98 24
Halodesulfovibrio 3
Haloferax 1
Haloferula 17
Halolactibacillus 4
Halomicronema 1 3
Halomonas 1 214 1 53
Halonatronum 3
Haloplasma 1 9
Halopolyspora 65
Halorhodospira 30 17
Halospina 7
Halospirulina 1
Halotalea 1
Halothermothrix 65 1
Halothiobacillus 19 2
Halyseosphaera 1
Hartmannibacter 1
Hathewaya 252 286
Hazenella 10
Helcococcus 22 68 45
Heleococcum 1
Helicobacter 4 14 113
Heliimonas 5
Heliobacterium 3 1
Heliomonas 1
Heliophilum 5
Heliorestis 5 132
Heliothrix 1
Hellea 5
Hemizonia 1
Henriciella 202
Heratemis 1
Herbaspirillum 270 27 13 138
Herbinix 174 6 4
Herichthys 1
Herminiimonas 86 27
Herpetosiphon 4
Hespellia 523 458 16
Hilliella 1
Hippea 2 1
Hirschia 1
Histophilus 4 1
Hoeflea 1
Holdemanella 275 4 129
Holdemania 604 395 23 284
Holophaga 1
Hoppeia 2
Hordeum 1
Howardella 137 328 4
Hoyosella 22
Hugenholtzia 14
Humibacter 9
Hungateiclostridium 2 372 4 293
Hungatella 445 34 7
Hwangdonia 8
Hydatigera 1
Hydnotryopsis 1
Hydrocarboniphaga 1 226
Hydrocoleum 3
Hydrogenibacillus 37 5
Hydrogenispora 236
Hydrogenoanaerobacterium 241 394
Hydrogenobacter 1 3
Hydrogenobaculum 4
Hydrogenophaga 1 2 1
Hydrogenophilus 3 94 126
Hydrogenothermus 5
Hydrogenovibrio 12 5
Hydrotalea 1 12
Hylemonella 1
Hymenobacter 3 15 202
Hyperoodon 1
Hyperoplus 1
Hyphomicrobium 2 8 43
Hyphomonas 4 35
Iamia 1 2
Ianmoorea 3
Icaria 1
Ichthyobacterium 1
Ideonella 2
Idiomarina 5 21
Ignatzschineria 5
Ignavibacterium 23 33
Ignavigranum 2 45
Ihubacter 29
Ileibacterium 3
Ilumatobacter 39
Ilyobacter 4
Immundisolibacter 3
Imperialibacter 16
Indibacter 12
Indioceanicola 3
Inquilinus 5 3
Insolitispirillum 116 169
Intestinibacillus 9
Intestinibacter 818 402 21 4
Intestinimonas 766 458 37 12
Iodobacter 6 3
Isochromatium 2
Janibacter 2 1 2
Jannaschia 1 1
Janthinobacterium 4 6
Jatropha 1
Jatrophihabitans 3 1
Jeotgalibaca 3
Jeotgalibacillus 2
Jeotgalicoccus 2 27 4
Jiangella 1 9
Johnsonella 17 327 301
Jonesia 40 4
Jonquetella 11 52 1
Julidochromis 1
Kaistia 17 10
Kallipyga 37 1
Kallotenue 10
Kandleria 75
Kangiella 21 1
Kappapapillomavirus 1
Kastovskya 3
Keratinibaculum 6
Ketobacter 1
Ketogulonicigenium 1 1
Kiloniella 25 3
Kineococcus 4 2
Kineosporia 4
Kingella 12 3 4
Kistimonas 1
Kitasatospora 5 18
Klebsiella 158 55 8 92
Kluyvera 576 4 5
Kockovaella 1
Kocuria 14 17 14
Kohautia 1
Komagataeibacter 17 3
Kordia 1
Kordiimonas 2
Koreibacter 2
Kosakonia 114 13
Kosmotoga 1 11
Kozakia 1 3
Kribbella 134 20
Kushneria 1 3 63
Kutzneria 1
Kyrpidia 57 1
Kytococcus 2 2
Labilibacter 2
Labilithrix 27
Labrenzia 1
Labrys 1
Laceyella 4 30
Lachnoanaerobaculum 23 458 4
Lachnobacterium 13 348 29 283
Lachnoclostridium 2 478 39 13
Lachnospira 758 442 35 330
Lachnotalea 3
Lacibacter 3 2
Lacibacterium 58
Lacihabitans 5
Lacimicrobium 1
Lacinutrix 1 4
Lactobacillus 618 460 24 294
Lactococcus 287 271 10 150
Lactonifactor 504 329 29
Lactovum 113
Lacunisphaera 3
Lagierella 1
Lampetra 1
Lamprocystis 2
Laribacter 1 3
Larkinella 1
Lautropia 20 20 19
Lawsonella 1
Lawsonia 266 6
Lebetimonas 6
Lecanora 1
Leclercia 1
Legionella 1 25 200
Leifsonia 2 1 1
Leishmania 1
Leisingera 1
Lelliottia 104
Leminorella 1
Lentibacillus 25 47
Lentisphaera 3
Lentivirus 1
Lentzea 3
Lepidocolaptes 1
Lepidozona 1
Leptofauchea 10
Leptolinea 46
Leptolyngbya 2 1 81
Leptonema 6
Leptospira 8 126
Leptospirillum 11 1
Leptothrix 62
Leptotrichia 43 24 20
Leucobacter 20 8
Leucocintractia 1
Leuconostoc 88 343 4 156
Leucothrix 3 11
Levilinea 1
Levinea Young et al. 1971 62 17 19 68
Levyella 195 1
Lewinella 7 22
Libanicoccus 1 1
Liberibacter 2 6 30
Limibacillus 12
Limibacter 2
Limimaricola 1
Limimonas 3
Limisphaera 4
Limnobacter 1 17 211
Limnobaculum 1
Limnochorda 2 1
Limnohabitans 2 4
Limnoraphis 2
Lishizhenia 1
Listeria 1 132 63
Litoribacillus 39
Litoribacter 11
Litoribrevibacter 5
Litoricola 22 8
Litorilinea 7
Litorilituus 33 4
Loktanella 5 1
Lonchitis 1
Longilinea 1 2
Longimonas 32
Lucinoma 1
Ludwigia 1
Luminiphilus 32
Luna cluster 1 1 3
Lunatimonas 2
Lupinus 1
Luteibacter 1 30 171
Luteibaculum 1
Luteimonas 16 9
Luteipulveratus 1
Luteitalea 1
Luteivirga 4
Luteococcus 13
Luteolibacter 1 16 145
Lutibacter 1 15 4
Lutispora 110 1
Lutra 1
Lysinibacillus 9 10 54
Lysinimonas 1
Lysobacter 2 44 69
MAC 3
Macaca 1
Macrococcus 1 7 150
Macropus 1
Madoqua 1
Mageeibacillus 1
Magnetococcus 9 1
Magnetospira 3 1
Magnetospirillum 4 2
Magnetovibrio 3
Mahella 9
Malassezia 2
Maledivibacter 19
Mangrovibacter 1
Mangroviflexus 2
Mannheimia 8 40 122
Maribacter 1 5
Maricaulis 9 3
Marichromatium 1 9 54
Marinicauda 1
Marinicella 8
Marinifilum 114
Mariniflexile 3 4
Marinilabilia 23 1
Marinilactibacillus 4
Marinimicrobium 1
Marininema 1
Mariniphaga 15
Mariniradius 7
Marinitalea Kim et al. 2011 1
Marinithermofilum 2
Marinithermus 2
Marinitoga 1 8
Marinobacter 83 13
Marinobacterium 20 4
Marinococcus 4 19
Marinomonas 19 5
Marinoscillum 19
Marinospirillum 26 55
Marinovum 1
Mariprofundus 13 1
Marispirillum 38
Maritalea 1
Maritimibacter 1
Marivirga 2 1
Marivivens 1
Marixanthomonas 15
Marmoricola 10 1
Marseillibacter 1 36
Martelella 1 2
Marvinbryantia 637 417 3 4
Massilia 7 13 20 4
Massilioclostridium 1 24
Massiliprevotella 3
Mastadenovirus 1
Mechercharimyces 7 2
Mediterranea 3
Megamonas 69 135 2 54
Meganema 15
Megasphaera 567 287 284
Meiothermus 1 15 132
Meiracyllium 1
Melaminivora 1
Melanochromis 1
Melghiribacillus 3
Melghirimyces 21
Melioribacter 319 11 4
Melissococcus 2 16
Melittangium 5 1
Meniscus 18
Merdibacter 1 7
Merdimonas 1
Mesoaciditoga 4
Mesoflavibacter 1
Mesonia 6 1
Mesoplasma 12 149
Mesorhizobium 10 5 5
Mesotoga 1
Metabacterium 1 2
Metakosakonia 2 1
Metallibacterium 1
Metallosphaera 6
Metaprevotella 3
Metarhizium 1
Methanimicrococcus 1
Methanobrevibacter 228 121 4 97
Methanocorpusculum 1 1 2
Methanolinea 1
Methanomassiliicoccus 26 22
Methanomethylophilus 23
Methanosphaera 40 19 2 19
Methylacidimicrobium van Teeseling et al. 2014 1
Methylarcula 12
Methylibium 4
Methylobacillus 48 144
Methylobacter 6
Methylobacterium 9 20 29
Methylocaldum 2 4
Methyloceanibacter 1
Methylocella 4 15
Methylococcus 1
Methylocystis 5 2
Methylogaea 1 29
Methyloglobulus 35
Methylohalobius 12
Methylohalomonas 5
Methylokorus 1
Methyloligella 2
Methylomagnum 4
Methylomarinovum 9
Methylomicrobium 4 3
Methylomonas 6 4
Methylomusa 4
Methylonatrum 2 188
Methyloparacoccus 2
Methylophaga 83 10
Methylophilus 12
Methylorubrum 4
Methylosinus 6
Methylosoma 1
Methylosphaera 4
Methylotenera 46 3
Methylothermus 1
Methyloversatilis 33 12
Methylovulum 1
Micavibrio 3
Microaerobacter 13
Microbacter 98
Microbacterium 11 117 73
Microbaicalia 1
Microbulbifer 7
Microcerotermes 1
Microchaete 3
Micrococcus 10 2 5
Microcoleus 50
Microcystis 1 4
Microlunatus 21 2
Micromonospora 5 20
Micropruina 1 1
Microscilla 1
Microterricola 4
Microtetraspora 2 4
Microvirga 1 5 3
Microvirgula 2
Millisia 1
Miniimonas 1
Mitsuaria 3
Mitsuokella 18 40 3 140
Mixta 1
Mizugakiibacter 8
Mobilitalea 61 2
Mobiluncus 130 165 2 41
Modestobacter 2 54
Modicisalibacter 1
Mogibacterium 529 335 1 268
Moheibacter 10
Molineria 1
Mongoliicoccus 9
Mongoliitalea 1
Monoglobus 4
Moorea 34 4
Mooreia 4
Moorella 15 234
Moraxella 14 128 9
Mordavella 1 6 4
Morganella 4 99 1 33
Moritella 1 1
Moryella 701 358 4 49
Mucilaginibacter 23 5 4
Mucinivorans 26 1
Mucispirillum 3 2
Murdochiella 248 1 4
Muribaculum 4
Muricauda 1 12
Muriicola 1
Murimonas 438 3
Myceligenerans 8
Mycetohabitans 8
Mycobacterium 33 23 82
Mycobacterium chelonae complex 3
Mycobacterium complex 3
Mycobacterium terrae complex 3
Mycolicibacterium 1 11 11
Mycoplana 1
Mycoplasma 10 304 1 255
Myroides 12 10
Mytilus 1
Myxococcus 1 1
Nafulsella 9
Nakamurella 2 4
Nannocystis 10 14
Nanoscypha 1
Nardonella 1
Natranaerobaculum 3
Natranaerobius 13 1
Natranaerovirga 302 7
Natribacillus 1
Natroniella 4
Natronincola 42 250
Naumannella 7
Nautilia 5 1
Ndongobacter 1
Necropsobacter 8
Negativibacillus 1 29 3
Negativicoccus 131 127 122
Neglecta 1
Neisseria 82 34 12 71
Nelumbo 1
Neoasaia 1 1
Neochlamydia 1
Neorhizobium 4
Neorickettsia 1 7
Neoscardovia 37
Neptuniibacter 2
Neptunomonas 1 1
Nereis 1
Nesterenkonia 54 9
Nevskia 1 3 9
Niabella 1 337 75
Niastella 1 3 2
Nibribacter 31
Nicoletella 4
Nigella 1
Nisaea 24
Nitratifractor 2
Nitratireductor 4
Nitratiruptor 1 1
Nitriliruptor 5 2
Nitrincola 1 1
Nitrobacter 4 1
Nitrococcus 15
Nitrolancea 4
Nitrosococcus 1 15 44
Nitrosomonas 2 147 5 3
Nitrosopumilus 1
Nitrososphaera 1 1
Nitrosospira 1 3 2
Nitrosovibrio 1
Nitrospina 2
Nitrospira 1 7 2
Nitrospirillum 3 1
Niveispirillum 101 1
Nocardia 3 5
Nocardioides 3 53 4
Nocardiopsis 19 6
Nodularia 1 41
Nonomuraea 13 49
Norovirus 1
Nosocomiicoccus 6
Nostoc 1 108
Novibacillus 8 4
Noviherbaspirillum 11
Novispirillum 61 177
Novosphingobium 7 18 11
Oblitimonas 1
Oceanibaculum 1
Oceanicoccus 26 1
Oceanimonas 2 1
Oceanirhabdus 4
Oceanisphaera 1 2
Oceanithermus 1
Oceanobacillus 14 4
Oceanobacter 1
Oceanospirillum 35 6
Oceanotoga 1
Ochrobactrum 28 3 30
Octadecabacter 2 3
Odoribacter 623 380 33 292
Oenococcus 38 65
Oerskovia 1
Ohtaekwangia 33
Okeania 2
Oleibacter 3
Oleiphilus 3
Oleispira 2
Oleomonas 24
Oligella 8 14 21
Oligosphaera 16
Oligotropha 1
Olivibacter 4 229
Olleya 4
Olsenella 64 228 9 35
Opitutus 1 6 5
Orbus 2
Orenia 30
Oreochromis 1
Oribacterium 41 468 28 275
Orientia 53 1
Ornatilinea 4
Ornithinicoccus 1 2
Ornithinimicrobium 4
Ornithobacterium 3 4
Orrella 1
Orthobunyavirus 1
Orthopoxvirus 1
Oscillatoria 69
Oscillibacter 743 472 38 15
Oscillospira 623 1 32 320
Osmadenia 1
Otariodibacter 10
Ottowia 3
Owenweeksia 1 1
Oxalicibacterium 49
Oxalobacter 146 8 155
Oxalophagus 1 21
Oxobacter 5 115
Oxybasis 1
Oxynema 2
Paenalcaligenes 1 1
Paenarthrobacter 1 1
Paenibacillus 1 378 13 124
Paeniclostridium 50 4
Paeniglutamicibacter 1
Paenisporosarcina 33 8
Pagothenia 1
Palicourea 1
Paludibacter 50 3 8
Paludibacterium 2
Paludibaculum 6
Paludisphaera 3
Pamelaescincus 1
Panacagrimonas 2
Pandoraea 12 5
Pannonibacter 4
Panonychus 1
Pantoea 189 70 1 12
Papilio 1
Papillibacter 419 237 29
Parabacteroides 763 472 37 336
Paraburkholderia 37 1 79
Parachlamydia 1 1
Paraclostridium 21
Paracoccus 1 20 24
Paraeggerthella 15 45
Parafilimonas 28
Parageobacillus 4 18
Paraglaciecola 6 1
Paraliobacillus 3
Parapanteles 1
Parapedobacter 13 110
Paraperlucidibaca 1
Paraphotobacterium 1
Paraprevotella 213 410 8 242
Pararheinheimera 6
Pararhodospirillum 1 1
Parasaccharibacter 5 1
Parascardovia 4 3 95
Parascaris 1
Parasegetibacter 2
Parashewanella 2 1
Parasporobacterium 171 190 17
Parasutterella 597 442 24 9
Parechinus 1
Parolsenella 1
Parvibacter 94 27 1
Parvibaculum 1
Parvimonas 96 92 5
Parvularcula 6 1
Pasteurella 20 11 30
Pasteuria 12
Patulibacter 2 1 1
Paucibacter 2 10
Paucimonas 2
Pectinatus 72 1 244
Pectobacterium 3 34 4
Pediococcus 34 54 195
Pedobacter 4 152 23 301
Pedomicrobium 1 1 11
Pelagibaca 1
Pelagibacterium 1
Pelagibius 2
Pelagicoccus 32 90
Pelistega 1 3
Pelobacter 22 10
Pelodictyon 1
Pelodiscus 1
Pelolinea 3 1
Pelomonas 20 4 4
Pelosinus 123 4
Pelospora 23
Pelotomaculum 48 125
Pelvicachromis 1
Penicillium 1
Peptoanaerobacter 16
Peptoclostridium 666 74 1
Peptococcus 407 192 5 296
Peptoniphilus 440 389 6 301
Peptostreptococcus 206 199 2 94
Perameles 1
Peredibacter 4
Perexilibacter 20
Perlucidibaca 3
Permianibacter 22
Perodicticus 1
Persephonella 1
Persicaria 1
Persicirhabdus 11
Persicitalea 30
Persicobacter 5 5
Petrimonas 13 4
Petrotoga 2
Petunia 1
Phaeobacter 11
Phaeobacterium 6
Phaeochromatium 7
Phaeocystidibacter 7
Phaeodactylibacter 8
Phaffomyces 1
Phascolarctobacterium 556 403 19 304
Phaseolibacter 2
Phenylobacterium 2 12 16
Phlebia 1
Phocaeicola 1 109
Phocea 11
Phoenicibacter 1
Phormidium 2
Photobacterium 1 16 5
Photorhabdus 57 4
Phreatobacter 1 1
Phycicoccus 1
Phycisphaera 2 1
Phyllobacterium 30 1
Phytoactinopolyspora 2
Phytomonospora 25
Pigmentiphaga 18
Pilibacter 12
Pilimelia 1 9
Pimelobacter 3
Pirellula 10 2
Pisciglobus 15
Piscinibacter 3
Piscirickettsia 9 1
Plagiomnium 1
Planctomyces 1 3
Planctopirus 1 2
plane trees 1
Planifilum 1 11 169
Planktomarina 2
Planktothrix 1 3
Planococcus 45 51
Planomicrobium 38 3 7
Plantactinospora 1 1
Plantibacter 1 1
Plasmodium 1
Plasticicumulans 80
Pleionea 1
Pleomorphomonas 5 1
Plesiocystis 3
Pleurocapsa 1
Pleuronectes 1
Pluralibacter 18 10
Polaribacter 1 8
Polaromonas 2 7
Polycladomyces 22
Polymorphobacter 2
Polymorphum 3
Polynucleibacter 56
Pontibacillus 82 85
Pontibacter 1 9 137
Ponticaulis 2
Pontivivens 1
Populus 1
Porphyrobacter 1 2 1
Porphyromonas 367 383 16 281
Portibacter 2
Porticoccus 1
Povalibacter 1
Pragia 145 4
Prauserella 2
Prevotella 481 477 23 320
Prochlorococcus 2 5
Prochlorothrix 2
Prognathochromis 1
Prolixibacter 3
Promicromonospora 1 3
Propionibacterium 121 16 12 17
Propionicimonas 1 4
Propioniferax 3 84
Propionigenium 3 11
Propionimicrobium 11
Propionispira 2 16
Propionispora 36 220
Propionivibrio 2 31 19
Prosthecobacter 15 66
Prosthecochloris 1 4
Proteiniborus 111
Proteiniclasticum 1
Proteiniphilum 40 14 4
Proteinivorax 47
Proteocatella 94 3
Proteus 17 84 17 15
Providencia 104 19
Prunus 1
Psathyrostachys 1
Pseudacidovorax 2
Pseudaeromonas 22
Pseudaminobacter 1
Pseudanabaena 4
Pseudarcicella 28 1
Pseudarthrobacter 1
Pseudescherichia 16
Pseudoalteromonas 15
Pseudobacteroides 8
Pseudobutyrivibrio 834 288 27 298
Pseudocentrotus 1
Pseudochrobactrum 1 11 4
Pseudoclavibacter 54 180 15
Pseudoclostridium 3 244
Pseudodesulfovibrio 54 5
Pseudoduganella 6
Pseudoflavitalea 4
Pseudoflavonifractor 498 398 31 7
Pseudofulvibacter 1
Pseudofulvimonas 1
Pseudoglutamicibacter 12 2 2
Pseudogulbenkiania 1
Pseudohongiella 5 2
Pseudokineococcus 10
Pseudolabrys 1
pseudomallei group 4
Pseudomaricurvus 2
Pseudomonas 70 199 7 82
Pseudomonas chlororaphis group 15
Pseudonocardia 15 13
Pseudooceanicola 1
Pseudopedobacter 110 1 1
Pseudopropionibacterium 6 2
Pseudoramibacter 3 56 134
Pseudorhodobacter 55
Pseudorhodoferax 1
Pseudorhodoplanes 1
Pseudoscardovia 301
Pseudoscillatoria 215
Pseudospirillum 1
Pseudothermotoga 4
Pseudovibrio 2 1
Pseudoxanthobacter 2
Pseudoxanthomonas 6 22 5
Pseudozyma 1
Psychrilyobacter 10
Psychrobacter 2 76 141
Psychroflexus 21 28
Psychromicrobium 1
Psychromonas 18 9
Psychroserpens 2 5
Psychrosinus 10
Psychrosphaera 2
Pullulanibacillus 57 2
Puniceicoccus 71 29
Pusillimonas 3 1
Pylodictis 1
Pyramidobacter 50 18
Pyrenomonas 1
Pyrinomonas 20
Pyrobaculum 1
Pyrocoelia 1
Pyrodictium 1
Pyxicoccus Reichenbach 2005 1
Qipengyuania 1
Quadrisphaera 1
Quasibacillus 12
Raffaelea 1
Rahnella 12 1
Ralstonia 16 8 21
Ramaria 1
Ramlibacter 3 2
Rangifer 1
Raoultella 32 1 5
Raoultibacter 11
Raphidiopsis 3
Rapidithrix 6
Rarobacter 35
Rathayibacter 2 1 2
Rehaibacterium 2
Reichenbachiella 7
Reinekea 87 1
Renibacterium 1
Renobacter 4
Reyranella 6
Rhabdochromatium 9
Rheinheimera 4 43 3
Rhizobacter 7
Rhizobium 13 22 5 6
Rhizomicrobium 10
Rhodanobacter 33 1
Rhodobaca 1
Rhodobacter 4 3 30
Rhodobium 1
Rhodococcus 24 3 66
Rhodocyclus 1
Rhodocytophaga 1 22
Rhodoferax 2 21
Rhodoluna 3
Rhodomicrobium 3 1
Rhodonellum 21
Rhodopila 1
Rhodopirellula 1 1
Rhodoplanes 1 1 14
Rhodopseudomonas 5 13 4
Rhodospira 4
Rhodospirillum 1 2 150
Rhodosporidiobolus 1
Rhodothalassium 11 7
Rhodothermus 3 272
Rhodovibrio 18 68
Rhodovulum 3 22 4
Rickettsia 87 191
Rickettsiella 10
Riemerella 3 3
Rikenella 2 3 12
Risungbinella 15
Rivibacter 1
Rivicola 4
Rivularia 28
Robbsia 6
Robiginitalea 1 1
Robiginitomaculum 3
Robinsoniella 180 365 33
Rodentibacter 20 4
Romboutsia 549 417 3 1
Roseateles 3 1
Roseburia 838 478 39 332
Roseiarcus 3
Roseibacterium 1 1
Roseiflexus 8 1
Roseimarinus 5
Roseimicrobium 18
Roseitalea 1
Roseivirga 27
Roseivivax 2
Rosenbergiella 93
Roseobacter 4
Roseococcus 1 7 10
Roseomonas 4 8 43
Roseospira 6 43
Roseovarius 1 2 3
Rothia 158 10 24 206
Rubellimicrobium 3 10 5
Rubidibacter 2
Rubidimonas 26
Rubinisphaera 3
Rubribacterium 1
Rubritalea 79 104
Rubritepida 1
Rubrivivax 2 2
Rubrobacter 1 23 6
Rudaea 4
Rudanella 2
Ruegeria 1
Rufibacter 23 4
Ruminiclostridium 34 466 38 145
Ruminobacter 35 1
Ruminococcus 2 478 39 335
Rummeliibacillus 1 22 2
Runella 39 126
Ruthenibacterium 1 33 6
Saccharibacillus 13
Saccharibacter 10
Saccharicrinis 32
Saccharofermentans 78 2
Saccharomonospora 103 3
Saccharophagus 1
Saccharopolyspora 32 102
Saccharospirillum 7
Saccharothrix 1 1
Sagittula 1
Saguinus 1
Salegentibacter 4
Salibacterium 5
Salimicrobium 14 3
Salinibacillus 12
Salinibacter 1
Salinibacterium 2
Salinicoccus 44 155
Salinicola 1 1
Salinimicrobium 1 1
Salinimonas 4
Salinisphaera 12 1
Salinispira 4
Salinispirillum 105
Salinispora 1
Salinivenus 1
Salinivibrio 17 8
Salinivirga 1
Salipiger 1
Salisaeta 39 63
Salmonella 4 6 20 49
Sambucus 1
Sandaracinobacter 1
Sandaracinus 5 1
Sanguibacter 2 1
Sapovirus 1
Saprospira 1
Sarcina 811 190
Scardovia 9 24 14
Schaalia 532 314 161
Schizothorax 1
Schlegelella 3 2 7
Schleiferia 8
Schlesneria 1
Schumannella 1
Schwartzia 6
Scriptaphyosemion 1
Scytonema 4
Sebaldella 1 29
Sedimentibacter 2 101 298
Sedimenticola 8 3
Sedimentisphaera 3
Sedimentitalea 1
Sediminibacillus 1
Sediminibacterium 1 13
Sediminicola 1
Sediminispirochaeta 1
Sediminitomix 39
Segetibacter 27 41
Segniliparus 17 1
Seinonella 13
Selenihalanaerobacter 33
Selenomonas 23 56 8 289
Sellimonas 1
Seminibacterium 1
Senegalimassilia 230 173 14 4
Seonamhaeicola 3
Septoria 1
Seres 1
Serinibacter 1
Serinicoccus 9 11
Serpentinomonas 2
Serratia 9 69 5 225
Sharpea 10 123
Shewanella 71 198
Shigella 1 169 6
Shimazuella 1 8
Shimia 1
Shimwellia 1
Shinella 6 15 5
Shivajiella 1
Shuttleworthia 262 336 198
Siansivirga 1 3
Siccationidurans 3
Sideroxydans 1
Silanimonas 13
Silene 1
Silicimonas 1
Simalia 1
Simiduia 10 1
Simkania 7 1
Simonsiella 1 3
Simplexvirus 1
Simplicispira 3
Singulisphaera 1 3 5
Sinibacillus 33
Sinobaca 1
Sinobacterium 57
Sinomonas 5 1
Sinorhizobium 1 5
Sinorhizobium fredii group 1 4
Sinorhizobium/Ensifer group 1 12 5
Sinosporangium 5
Siphonobacter 15
Skermanella 1 19 134
Slackia 273 264 19 273
Smithella 5 1
Sneathia 10 40 11
Sneathiella 4
Snodgrassella 1
Snowella 10
Sodalis 4
Soehngenia 1 10
Solimonas 4 1
Solirubrobacter 1 10 5
Solitalea 17 1
Solobacterium 103 68 2 40
Sorangium 2 1 4
Sorex 1
Sphaerimonospora 3
Sphaerobacter 2
Sphaerochaeta 1 4
Sphaerospermopsis 1
Sphaerotilus 2
Sphenostylis 1
Sphingobacterium 4 87 3 299
Sphingobium 8 30 27
Sphingomicrobium 6
Sphingomonas 24 233 14 48
Sphingopyxis 3 11 4
Sphingorhabdus 4 1
Sphingosinicella 1 4
Spiribacter 8 4
Spirilliplanes 2
Spirillum 1 14
Spirochaeta 12 1
Spiroplasma 183 4
Spirosoma 4 5
Spirulina 3
Spodoptera 1
Spongiibacter 1 1
Spongiibacterium 1 1
Spongitalea 1
Sporacetigenium 71
Sporanaerobacter 6 1 5
Sporichthya 7 2
Sporisorium 1
Sporobacter 429 435 11
Sporobacterium 1 285 1 8
Sporobolomyces 1
Sporocytophaga 3
Sporohalobacter 9
Sporolactobacillus 3 72
Sporomusa 97
Sporosalibacterium 26
Sporosarcina 374 23 39
Sporotomaculum 85 162
Stackebrandtia 62 1
Stanieria 1
Staphylococcus 232 118 2 122
Stappia 1
Starria 43
Stella 95
Stenotrophomonas 30 40 36
Stenoxybacter 6
Stereum 1
Steroidobacter 11 2
Sterolibacterium 6 3
Stichodactyla 1
Stigmatella 12 1
Stomatobaculum 18 189 1
Streptacidiphilus 8
Streptobacillus 2 31 3
Streptococcus 833 470 39 330
Streptohalobacillus 3
Streptomonospora 141 1
Streptomyces 93 2 75
Streptosporangium 5 8
Stylosanthes 1
Subdoligranulum 829 459 22 8
Subsaximicrobium 1
Succinatimonas 6 36
Succiniclasticum 38 115 5 18
Succinimonas 35
Succinispira 51
Succinivibrio 9 57 77
Sufflavibacter 1
Sulfitobacter 1 4
Sulfobacillus 16 14
Sulfuricaulis 3
Sulfuricella 1
Sulfuricurvum 3
Sulfuriferula 3
Sulfuriflexus 1
Sulfurifustis 3 1
Sulfurihydrogenibium 1
Sulfurimonas 1 1
Sulfurisoma 2
Sulfuritalea 1
Sulfurivirga 7
Sulfurospirillum 1 13
Sulfurovum 1 1
Sungkyunkwania 1
Sunxiuqinia 25
Sutterella 556 443 30 326
Suttonella 10
Swaminathania 1
Symbiobacterium 8 187
Symploca 6
Synechococcus 4 4
Synergistes 15 4 7
Syntrophaceticus 18
Syntrophobacter 7 3
Syntrophobotulus 6 1
Syntrophococcus 31 280 11
Syntrophomonas 3 181 67
Syntrophorhabdus 16
Syntrophothermus 17 1
Syntrophus 12 3
Taeniopygia 1
Taibaiella 1 27
Tambourissa 1
Tamias 1
Tamilnaduibacter 11
Tamlana 2 1
Tangfeifania 6
Tannerella 11 151 6
Tanticharoenia 1
Taonella 1
Tapinothrix 6
Taraxacum 1
Tardiphaga 1
Tateyamaria 1
Tatumella 4 1
Taylorella 4 1
Telmatocola 1
Telmatospirillum 17 27
Temperatibacter 1
Tenacibaculum 3 40
Tenuibacillus 8
Tepidamorphus 1
Tepidanaerobacter 9 130
Tepidibacillus 32
Tepidibacter 65 87
Tepidimicrobium 166 1 23
Tepidimonas 13 17 3
Terasakiella 1
Terasakiispira 2
Teredinibacter 1
Terrabacter 1
Terracoccus 1
Terribacillus 14 1 5
Terriglobus 4 4
Terrimonas 19
Terrisporobacter 639 387 6 3
Tessaracoccus 24 86 1
Tetragenococcus 2 50 188
Tetrasphaera 10 5
Texcoconibacillus 67
Thalassococcus 3
Thalassolituus 1
Thalassomonas 7
Thalassospira 391 3 70
Thalassotalea 44 1
Thauera 36 46
Thermacetogenium 8 4
Thermaerobacter 18 4
Thermanaeromonas 1 3
Thermanaerothrix Gregoire et al. 2011 1
Thermanaerovibrio 1 1
Thermasporomyces 12
Thermicanus 1 232 242
Thermincola 1 14 3
Thermoactinomyces 95 13
Thermoanaerobacter 15 96
Thermoanaerobacterium 3 54
Thermoanaerobaculum 40
Thermobacillus 5 11
Thermobaculum 45 63
Thermobifida 1
Thermobispora 4 1
Thermoclostridium 103 177
Thermococcus 2
Thermocrinis 3 1
Thermodesulfatator 1 49
Thermodesulfobacterium 1
Thermodesulfobium 6 2 1
Thermodesulforhabdus 20
Thermodesulfovibrio 6 49
Thermoflexibacter 49
Thermogemmatispora 5 20
Thermogutta 12 1
Thermogymnomonas 13
Thermohalobacter 9
Thermohydrogenium 17
Thermoleophilum 19
Thermolithobacter 21
Thermolongibacillus 32
Thermomarinilinea 12
Thermomicrobium 1
Thermomonas 5 1 1
Thermomonospora 3
Thermonema 13
Thermophagus 34
Thermopolyspora 2
Thermosediminibacter 12 1
Thermosinus 1
Thermosipho 3
Thermosporothrix 2
Thermostaphylospora 1
Thermosulfidibacter 2
Thermosynechococcus 1
Thermosyntropha 3
Thermotoga 1
Thermotomaculum 5
Thermovenabulum 16 40
Thermovibrio 1
Thermovirga 3
Thermovorax 1
Thermus 17 46
Theromyzon 1
Thioalbus 1
Thioalkalicoccus 5
Thioalkalimicrobium 1 36 37
Thioalkalispira 5
Thioalkalivibrio 20 43
Thiobacillus 1 21 42
Thiobacter 2
Thiocapsa 40 104
Thioclava 1 1
Thiococcus 1
Thiocystis 21 3
Thiofaba 1
Thiofilum 2
Thioflavicoccus 1
Thiohalobacter 60 1
Thiohalocapsa 44
Thiohalomonas 3
Thiohalophilus 1
Thiohalorhabdus 69 143
Thiohalospira 5
Thiolamprovum 141
Thiolapillus 1
Thiolinea 2
Thiomonas 1 114 92
Thiophaeococcus 6
Thioploca 4
Thioprofundum 5
Thioreductor 3
Thiorhodococcus 8 64
Thiorhodospira 2 7
Thiorhodovibrio 26
Thiothrix 1 39 206
Thiovirga 13 1
Thlaspi 1
Thorsellia 35
Tigriopus 1
Tilapia 1
Tindallia 63 268
Tischeria 1
Tissierella 40
Tistrella 22 1
Tolumonas 3 91
Tolyposporium 1
Tomitella 11
Tomopterna 1